RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 PARP14Q460N5 1801 aa14.05□□□□□ -0.16
PDLIM5-220ENST00000514830 RASSF10A6NK89 507 aa14.04□□□□□ -0.16
PDLIM5-220ENST00000514830 C19orf81C9J6K1 198 aa14.04□□□□□ -0.16
PDLIM5-220ENST00000514830 CXCL11O14625 94 aa14.04□□□□□ -0.16
PDLIM5-220ENST00000514830 ZBTB48P10074 688 aaPredicted RBP14.04□□□□□ -0.16
PDLIM5-220ENST00000514830 SH3D19Q5HYK7 790 aa14.04□□□□□ -0.16
PDLIM5-220ENST00000514830 PAXIP1Q6ZW49 1069 aaPredicted RBP14.04□□□□□ -0.16
PDLIM5-220ENST00000514830 SNX21Q969T3 373 aa14.04□□□□□ -0.16
PDLIM5-220ENST00000514830 ZNF274Q96GC6 653 aaPredicted RBP14.04□□□□□ -0.16
PDLIM5-220ENST00000514830 CLMNQ96JQ2 1002 aa14.04□□□□□ -0.16
PDLIM5-220ENST00000514830 CLIP2Q9UDT6 1046 aa14.04□□□□□ -0.16
PDLIM5-220ENST00000514830 STX8Q9UNK0 236 aa14.04□□□□□ -0.16
PDLIM5-220ENST00000514830 A0A1W2PRG0 241 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 DDAH1O94760 285 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 SNHG28P0DPA3 235 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 USP14P54578 494 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 AK2P54819 239 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 BACE1P56817 501 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 HUNKP57058 714 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 TROAPQ12815 778 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 PPP2R5BQ15173 497 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 PNMA1Q8ND90 353 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 LPAR1Q92633 364 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 BRF1Q92994 677 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 SLC10A4Q96EP9 437 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 C12orf42Q96LP6 360 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 TCEANC2Q96MN5 208 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 LRRC2Q9BYS8 371 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 KAT14Q9H8E8 782 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 ELP3Q9H9T3 547 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 ZHX2Q9Y6X8 837 aa14.03□□□□□ -0.16
PDLIM5-220ENST00000514830 WDR33Q9C0J8 1336 aaKnown RBP14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 USP17L10C9JJH3 530 aa14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 CALM1P0DP23 149 aa14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 CALM2P0DP24 149 aa14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 CALM3P0DP25 149 aa14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 FGD1P98174 961 aa14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 APOA5Q6Q788 366 aa14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 CATIPQ7Z7H3 387 aa14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 CLEC10AQ8IUN9 316 aa14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 ZNF654Q8IZM8 581 aa14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 ACER1Q8TDN7 264 aa14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 OPTNQ96CV9 577 aa14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 GMCL1Q96IK5 515 aa14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 WNK4Q96J92 1243 aa14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 VCPKMTQ9H867 229 aa14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 SENP2Q9HC62 589 aa14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 GOPCQ9HD26 462 aa14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 GPHNQ9NQX3 736 aaPredicted RBP14.02□□□□□ -0.17
PDLIM5-220ENST00000514830 CCDC69A6NI79 296 aa14.01□□□□□ -0.17
PDLIM5-220ENST00000514830 SPP2Q13103 211 aa14.01□□□□□ -0.17
PDLIM5-220ENST00000514830 SPRYD7Q5W111 196 aa14.01□□□□□ -0.17
PDLIM5-220ENST00000514830 RGMBQ6NW40 437 aa14.01□□□□□ -0.17
PDLIM5-220ENST00000514830 USP17L2Q6R6M4 530 aa14.01□□□□□ -0.17
PDLIM5-220ENST00000514830 PROCA1Q8NCQ7 364 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-220ENST00000514830 DCAF4Q8WV16 495 aa14.01□□□□□ -0.17
PDLIM5-220ENST00000514830 ZSCAN31Q96LW9 406 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-220ENST00000514830 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-220ENST00000514830 BRPF3Q9ULD4 1205 aa14.01□□□□□ -0.17
PDLIM5-220ENST00000514830 LIMCH1Q9UPQ0 1083 aa14.01□□□□□ -0.17
PDLIM5-220ENST00000514830 SLC12A7Q9Y666 1083 aa14.01□□□□□ -0.17
PDLIM5-220ENST00000514830 RLFQ13129 1914 aa14.01□□□□□ -0.17
PDLIM5-220ENST00000514830 A0A0G2JLL6 359 aaPredicted RBP14□□□□□ -0.17
PDLIM5-220ENST00000514830 KLF18A0A0U1RQI7 1052 aa14□□□□□ -0.17
PDLIM5-220ENST00000514830 F5H6K3 240 aa14□□□□□ -0.17
PDLIM5-220ENST00000514830 IRF6O14896 467 aa14□□□□□ -0.17
PDLIM5-220ENST00000514830 PLA2G6O60733 806 aa14□□□□□ -0.17
PDLIM5-220ENST00000514830 SLC10A3P09131 477 aa14□□□□□ -0.17
PDLIM5-220ENST00000514830 GJA5P36382 358 aa14□□□□□ -0.17
PDLIM5-220ENST00000514830 KLRC3Q07444 240 aa14□□□□□ -0.17
PDLIM5-220ENST00000514830 APOBRQ0VD83 1088 aa14□□□□□ -0.17
PDLIM5-220ENST00000514830 SYNE3Q6ZMZ3 975 aa14□□□□□ -0.17
PDLIM5-220ENST00000514830 NFXL1Q6ZNB6 911 aa14□□□□□ -0.17
PDLIM5-220ENST00000514830 PRRT2Q7Z6L0 340 aaPredicted RBP14□□□□□ -0.17
PDLIM5-220ENST00000514830 RASAL3Q86YV0 1011 aa14□□□□□ -0.17
PDLIM5-220ENST00000514830 CCDC102AQ96A19 550 aa14□□□□□ -0.17
PDLIM5-220ENST00000514830 OTUD5Q96G74 571 aa14□□□□□ -0.17
PDLIM5-220ENST00000514830 ABHD8Q96I13 439 aa14□□□□□ -0.17
PDLIM5-220ENST00000514830 SH2B1Q9NRF2 756 aaPredicted RBP14□□□□□ -0.17
PDLIM5-220ENST00000514830 HPS5Q9UPZ3 1129 aa14□□□□□ -0.17
PDLIM5-220ENST00000514830 THSD7BQ9C0I4 1608 aa14□□□□□ -0.17
PDLIM5-220ENST00000514830 WDR46O15213 610 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 ZBTB43O43298 467 aa13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 PFKFB2O60825 505 aa13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 NDUFB10O96000 172 aa13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 PDHBP11177 359 aa13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 PDIA3P30101 505 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 GTF2A2P52657 109 aa13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 SNAPC2Q13487 334 aa13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 MTMR2Q13614 643 aa13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 GRM4Q14833 912 aa13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 ASPRV1Q53RT3 343 aa13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 GPATCH4Q5T3I0 446 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 CCDC84Q86UT8 332 aaPredicted RBP13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 LRRC47Q8N1G4 583 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 CNKSR2Q8WXI2 1034 aa13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 CHMP4CQ96CF2 233 aa13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 FEZ1Q99689 392 aa13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 EMILIN3Q9NT22 766 aa13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 TPCN1Q9ULQ1 816 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms