RNA–Protein interactions for RNA: ENST00000513895.1

LINC00616-204, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-204ENST00000513895 TCF12Q99081 682 aa8.02□□□□□ -1.13
LINC00616-204ENST00000513895 ACSS3Q9H6R3 686 aa8.02□□□□□ -1.13
LINC00616-204ENST00000513895 CCDC87Q9NVE4 849 aa8.02□□□□□ -1.13
LINC00616-204ENST00000513895 ZC3H7BQ9UGR2 993 aaKnown RBP8.02□□□□□ -1.13
LINC00616-204ENST00000513895 NHSL1Q5SYE7 1610 aa8.02□□□□□ -1.13
LINC00616-204ENST00000513895 USP6P35125 1406 aa8.02□□□□□ -1.13
LINC00616-204ENST00000513895 TRPM3Q9HCF6 1732 aaPredicted RBP8.01□□□□□ -1.13
LINC00616-204ENST00000513895 KTN1Q86UP2 1357 aaKnown RBP8.01□□□□□ -1.13
LINC00616-204ENST00000513895 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.01□□□□□ -1.13
LINC00616-204ENST00000513895 A0A1W2PP55 124 aa8.01□□□□□ -1.13
LINC00616-204ENST00000513895 JAG1P78504 1218 aa8.01□□□□□ -1.13
LINC00616-204ENST00000513895 FKBP4Q02790 459 aaKnown RBP eCLIP8.01□□□□□ -1.13
LINC00616-204ENST00000513895 SPRED3Q2MJR0 410 aa8.01□□□□□ -1.13
LINC00616-204ENST00000513895 AKAP4Q5JQC9 854 aa8.01□□□□□ -1.13
LINC00616-204ENST00000513895 KRT28Q7Z3Y7 464 aa8.01□□□□□ -1.13
LINC00616-204ENST00000513895 NPAS4Q8IUM7 802 aa8.01□□□□□ -1.13
LINC00616-204ENST00000513895 POU5F2Q8N7G0 328 aa8.01□□□□□ -1.13
LINC00616-204ENST00000513895 C8orf37Q96NL8 207 aa8.01□□□□□ -1.13
LINC00616-204ENST00000513895 TRIM56Q9BRZ2 755 aaKnown RBP8.01□□□□□ -1.13
LINC00616-204ENST00000513895 LIN7BQ9HAP6 207 aa8.01□□□□□ -1.13
LINC00616-204ENST00000513895 LRRC4CQ9HCJ2 640 aa8.01□□□□□ -1.13
LINC00616-204ENST00000513895 FAM105AQ9NUU6 356 aa8.01□□□□□ -1.13
LINC00616-204ENST00000513895 AP4E1Q9UPM8 1137 aa8.01□□□□□ -1.13
LINC00616-204ENST00000513895 EDC4Q6P2E9 1401 aaKnown RBP8.01□□□□□ -1.13
LINC00616-204ENST00000513895 TTC21BQ7Z4L5 1316 aa8.01□□□□□ -1.13
LINC00616-204ENST00000513895 PXDNQ92626 1479 aa8□□□□□ -1.13
LINC00616-204ENST00000513895 AHDC1Q5TGY3 1603 aaPredicted RBP8□□□□□ -1.13
LINC00616-204ENST00000513895 DYMQ7RTS9 669 aa8□□□□□ -1.13
LINC00616-204ENST00000513895 GALNT12Q8IXK2 581 aa8□□□□□ -1.13
LINC00616-204ENST00000513895 DDX17Q92841 729 aaKnown RBP8□□□□□ -1.13
LINC00616-204ENST00000513895 GSX1Q9H4S2 264 aaPredicted RBP8□□□□□ -1.13
LINC00616-204ENST00000513895 ZFYVE1Q9HBF4 777 aa8□□□□□ -1.13
LINC00616-204ENST00000513895 NSD3Q9BZ95 1437 aa8□□□□□ -1.13
LINC00616-204ENST00000513895 NPHP3Q7Z494 1330 aa8□□□□□ -1.13
LINC00616-204ENST00000513895 SBNO1A3KN83 1393 aa7.99□□□□□ -1.13
LINC00616-204ENST00000513895 NPC1L1Q9UHC9 1359 aa7.99□□□□□ -1.13
LINC00616-204ENST00000513895 FYB1O15117 783 aa7.99□□□□□ -1.13
LINC00616-204ENST00000513895 ECEL1O95672 775 aa7.99□□□□□ -1.13
LINC00616-204ENST00000513895 SEZ6L2Q6UXD5 910 aa7.99□□□□□ -1.13
LINC00616-204ENST00000513895 CORO1BQ9BR76 489 aa7.99□□□□□ -1.13
LINC00616-204ENST00000513895 PPP1R1BQ9UD71 204 aaPredicted RBP7.99□□□□□ -1.13
LINC00616-204ENST00000513895 KNSTRNQ9Y448 316 aa7.99□□□□□ -1.13
LINC00616-204ENST00000513895 TTC21AQ8NDW8 1320 aa7.99□□□□□ -1.13
LINC00616-204ENST00000513895 USP54Q70EL1 1684 aa7.98□□□□□ -1.13
LINC00616-204ENST00000513895 ALS2Q96Q42 1657 aa7.98□□□□□ -1.13
LINC00616-204ENST00000513895 PPM1GO15355 546 aaPredicted RBP7.98□□□□□ -1.13
LINC00616-204ENST00000513895 B3GALT4O96024 378 aa7.98□□□□□ -1.13
LINC00616-204ENST00000513895 C8AP07357 584 aa7.98□□□□□ -1.13
LINC00616-204ENST00000513895 ZNF211Q13398 564 aaPredicted RBP7.98□□□□□ -1.13
LINC00616-204ENST00000513895 C1GALT1Q9NS00 363 aa7.98□□□□□ -1.13
LINC00616-204ENST00000513895 RAD18Q9NS91 495 aa7.98□□□□□ -1.13
LINC00616-204ENST00000513895 KIF20BQ96Q89 1820 aa7.98□□□□□ -1.13
LINC00616-204ENST00000513895 PIK3C2AO00443 1686 aa7.98□□□□□ -1.13
LINC00616-204ENST00000513895 ANKRD26Q9UPS8 1709 aa7.98□□□□□ -1.13
LINC00616-204ENST00000513895 MARF1Q9Y4F3 1742 aaKnown RBP7.98□□□□□ -1.13
LINC00616-204ENST00000513895 USP31Q70CQ4 1352 aa7.97□□□□□ -1.13
LINC00616-204ENST00000513895 DYNC1LI2O43237 492 aaPredicted RBP7.97□□□□□ -1.13
LINC00616-204ENST00000513895 SMARCA5O60264 1052 aaPredicted RBP7.97□□□□□ -1.13
LINC00616-204ENST00000513895 ABL1P00519 1130 aa7.97□□□□□ -1.13
LINC00616-204ENST00000513895 ASPAP45381 313 aa7.97□□□□□ -1.13
LINC00616-204ENST00000513895 ZC3H6P61129 1189 aaKnown RBP7.97□□□□□ -1.13
LINC00616-204ENST00000513895 XPCQ01831 940 aaPredicted RBP7.97□□□□□ -1.13
LINC00616-204ENST00000513895 NME9Q86XW9 330 aa7.97□□□□□ -1.13
LINC00616-204ENST00000513895 WFDC3Q8IUB2 231 aa7.97□□□□□ -1.13
LINC00616-204ENST00000513895 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.97□□□□□ -1.13
LINC00616-204ENST00000513895 ZNF576Q9H609 170 aa7.97□□□□□ -1.13
LINC00616-204ENST00000513895 ANO2Q9NQ90 1003 aa7.97□□□□□ -1.13
LINC00616-204ENST00000513895 PHLPP1O60346 1717 aa7.97□□□□□ -1.13
LINC00616-204ENST00000513895 CGNL1Q0VF96 1302 aa7.97□□□□□ -1.13
LINC00616-204ENST00000513895 SPATA31A3Q5VYP0 1347 aa7.97□□□□□ -1.13
LINC00616-204ENST00000513895 NSD2O96028 1365 aa7.97□□□□□ -1.13
LINC00616-204ENST00000513895 COL16A1Q07092 1604 aaPredicted RBP7.96□□□□□ -1.13
LINC00616-204ENST00000513895 PAPLNO95428 1278 aa7.96□□□□□ -1.14
LINC00616-204ENST00000513895 VAMP1P23763 118 aa7.96□□□□□ -1.14
LINC00616-204ENST00000513895 DIEXFQ68CQ4 756 aaKnown RBP7.96□□□□□ -1.14
LINC00616-204ENST00000513895 DDX54Q8TDD1 881 aaKnown RBP7.96□□□□□ -1.14
LINC00616-204ENST00000513895 KRTAP4-7Q9BYR0 210 aa7.96□□□□□ -1.14
LINC00616-204ENST00000513895 DAGLAQ9Y4D2 1042 aa7.96□□□□□ -1.14
LINC00616-204ENST00000513895 OVOS2A0A0J9YW53 1432 aa7.95□□□□□ -1.14
LINC00616-204ENST00000513895 TNS3Q68CZ2 1445 aa7.95□□□□□ -1.14
LINC00616-204ENST00000513895 OVOS2Q6IE36 1432 aa7.95□□□□□ -1.14
LINC00616-204ENST00000513895 AOC2O75106 756 aa7.95□□□□□ -1.14
LINC00616-204ENST00000513895 ITPKAP23677 461 aa7.95□□□□□ -1.14
LINC00616-204ENST00000513895 CANXP27824 592 aaKnown RBP7.95□□□□□ -1.14
LINC00616-204ENST00000513895 TAGLNQ01995 201 aaKnown RBP7.95□□□□□ -1.14
LINC00616-204ENST00000513895 BCL7CQ8WUZ0 217 aaPredicted RBP7.95□□□□□ -1.14
LINC00616-204ENST00000513895 LRRC59Q96AG4 307 aaKnown RBP7.95□□□□□ -1.14
LINC00616-204ENST00000513895 WDR18Q9BV38 432 aa7.95□□□□□ -1.14
LINC00616-204ENST00000513895 PRKRIP1Q9H875 184 aaPredicted RBP7.95□□□□□ -1.14
LINC00616-204ENST00000513895 SLC5A6Q9Y289 635 aa7.95□□□□□ -1.14
LINC00616-204ENST00000513895 PARD3Q8TEW0 1356 aa7.95□□□□□ -1.14
LINC00616-204ENST00000513895 CRYBG1Q9Y4K1 1723 aa7.95□□□□□ -1.14
LINC00616-204ENST00000513895 MED1Q15648 1581 aaPredicted RBP7.94□□□□□ -1.14
LINC00616-204ENST00000513895 COL22A1Q8NFW1 1626 aaPredicted RBP7.94□□□□□ -1.14
LINC00616-204ENST00000513895 RECKO95980 971 aa7.94□□□□□ -1.14
LINC00616-204ENST00000513895 NAALADL2Q58DX5 795 aa7.94□□□□□ -1.14
LINC00616-204ENST00000513895 CC2D1BQ5T0F9 858 aaKnown RBP7.94□□□□□ -1.14
LINC00616-204ENST00000513895 KIAA0319Q5VV43 1072 aa7.94□□□□□ -1.14
LINC00616-204ENST00000513895 USPL1Q5W0Q7 1092 aa7.94□□□□□ -1.14
LINC00616-204ENST00000513895 OGFOD3Q6PK18 319 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms