RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, human

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDGFC-208	ENST00000512711	GIPC2	Q8TF65	315 aa		4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	COX4I2	Q96KJ9	171 aa		4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	FAM84A	Q96KN4	292 aa		4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	CCDC74B	Q96LY2	380 aa		4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	DIRC2	Q96SL1	478 aa		4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	BCL2L13	Q9BXK5	485 aa		4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	ANTXR1	Q9H6X2	564 aa		4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	UBP1	Q9NZI7	540 aa		4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	ADAMTS1	Q9UHI8	967 aa		4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	PCDHB14	Q9Y5E9	798 aa		4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	PCDHA11	Q9Y5I1	949 aa		4.2	□□□□□ -1.74
PDGFC-208	ENST00000512711	ZGLP1	P0C6A0	271 aa		4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	GALK1	P51570	392 aa		4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	CLC	Q05315	142 aa		4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	EGR3	Q06889	387 aa		4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	MPP2	Q14168	576 aa		4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	PKN1	Q16512	942 aa		4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	ARSH	Q5FYA8	562 aa		4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	MPZL3	Q6UWV2	235 aa		4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	SYDE1	Q6ZW31	735 aa	Predicted RBP	4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	ABHD4	Q8TB40	342 aa		4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	RNF141	Q8WVD5	230 aa		4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	MYLIP	Q8WY64	445 aa		4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	KCNQ5	Q9NR82	932 aa		4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	GPATCH2	Q9NW75	528 aa		4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	FAM53C	Q9NYF3	392 aa		4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	DUSP13	Q9UII6	198 aa		4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	TMEM59L	Q9UK28	342 aa		4.19	□□□□□ -1.74
PDGFC-208	ENST00000512711	RGS13	O14921	159 aa		4.18	□□□□□ -1.74
PDGFC-208	ENST00000512711	ATE1	O95260	518 aa		4.18	□□□□□ -1.74
PDGFC-208	ENST00000512711	EFEMP2	O95967	443 aa		4.18	□□□□□ -1.74
PDGFC-208	ENST00000512711	HPX	P02790	462 aa		4.18	□□□□□ -1.74
PDGFC-208	ENST00000512711	ERCC3	P19447	782 aa		4.18	□□□□□ -1.74
PDGFC-208	ENST00000512711	GBP1	P32455	592 aa		4.18	□□□□□ -1.74
PDGFC-208	ENST00000512711	SNW1	Q13573	536 aa	Known RBP	4.18	□□□□□ -1.74
PDGFC-208	ENST00000512711	PWP1	Q13610	501 aa		4.18	□□□□□ -1.74
PDGFC-208	ENST00000512711	SEZ6	Q53EL9	994 aa		4.18	□□□□□ -1.74
PDGFC-208	ENST00000512711	PHACTR4	Q8IZ21	702 aa		4.18	□□□□□ -1.74
PDGFC-208	ENST00000512711	USHBP1	Q8N6Y0	703 aa		4.18	□□□□□ -1.74
PDGFC-208	ENST00000512711	NSUN3	Q9H649	340 aa	Known RBP	4.18	□□□□□ -1.74
PDGFC-208	ENST00000512711	GGT7	Q9UJ14	662 aa		4.18	□□□□□ -1.74
PDGFC-208	ENST00000512711	KCNH3	Q9ULD8	1083 aa		4.18	□□□□□ -1.74
PDGFC-208	ENST00000512711	MINPP1	Q9UNW1	487 aa		4.18	□□□□□ -1.74
PDGFC-208	ENST00000512711	C1QTNF9	P0C862	333 aa		4.17	□□□□□ -1.74
PDGFC-208	ENST00000512711	CFP	P27918	469 aa		4.17	□□□□□ -1.74
PDGFC-208	ENST00000512711	TMC3	Q7Z5M5	1100 aa		4.17	□□□□□ -1.74
PDGFC-208	ENST00000512711	ATG4C	Q96DT6	458 aa		4.17	□□□□□ -1.74
PDGFC-208	ENST00000512711	EAF1	Q96JC9	268 aa	Predicted RBP	4.17	□□□□□ -1.74
PDGFC-208	ENST00000512711	SLC38A3	Q99624	504 aa		4.17	□□□□□ -1.74
PDGFC-208	ENST00000512711	RNF32	Q9H0A6	362 aa		4.17	□□□□□ -1.74
PDGFC-208	ENST00000512711	TRIT1	Q9H3H1	467 aa	Known RBP	4.17	□□□□□ -1.74
PDGFC-208	ENST00000512711	EHMT1	Q9H9B1	1298 aa		4.17	□□□□□ -1.74
PDGFC-208	ENST00000512711	ZNF281	Q9Y2X9	895 aa		4.17	□□□□□ -1.74
PDGFC-208	ENST00000512711	ROBO2	Q9HCK4	1378 aa		4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	RBM47	A0AV96	593 aa	Known RBP	4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	NOTO	A8MTQ0	251 aa		4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	PSPN	O60542	156 aa		4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	ZNF16	P17020	682 aa	Predicted RBP	4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	LTK	P29376	864 aa		4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	TEK	Q02763	1124 aa		4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	CWF19L2	Q2TBE0	894 aa	Known RBP	4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	KRTAP19-4	Q3LI73	84 aa		4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	ZNF326	Q5BKZ1	582 aa	Known RBP	4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	NBPF12	Q5TAG4	269 aa	Predicted RBP	4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	LCE5A	Q5TCM9	118 aa		4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	ZPBP2	Q6X784	338 aa		4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	GK5	Q6ZS86	529 aa		4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	C1QL4	Q86Z23	238 aa		4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	LRRC3	Q9BY71	257 aa		4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	BACH2	Q9BYV9	841 aa		4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	SUPT16H	Q9Y5B9	1047 aa	Known RBP	4.16	□□□□□ -1.74
PDGFC-208	ENST00000512711	RAG1	P15918	1043 aa		4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	MCM4	P33991	863 aa		4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	RAP1GAP	P47736	663 aa		4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	NBPF9	Q3BBW0	867 aa		4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	CDCP2	Q5VXM1	449 aa		4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	OVOS1	Q6IE37	1185 aa		4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	SIRT2	Q8IXJ6	389 aa		4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	TMEM192	Q8IY95	271 aa		4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	TMEM87A	Q8NBN3	555 aa		4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	PDZD8	Q8NEN9	1154 aa		4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	LINC01599	Q8WXQ3	324 aa		4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	SHISA4	Q96DD7	197 aa		4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	CCDC120	Q96HB5	630 aa		4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	G6PC3	Q9BUM1	346 aa		4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	ASPN	Q9BXN1	380 aa		4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	CNNM2	Q9H8M5	875 aa		4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.15	□□□□□ -1.75
PDGFC-208	ENST00000512711	ETV2	O00321	342 aa	Predicted RBP	4.14	□□□□□ -1.75
PDGFC-208	ENST00000512711	RAC2	P15153	192 aa		4.14	□□□□□ -1.75
PDGFC-208	ENST00000512711	APOBR	Q0VD83	1088 aa		4.14	□□□□□ -1.75
PDGFC-208	ENST00000512711	NMI	Q13287	307 aa	Predicted RBP	4.14	□□□□□ -1.75
PDGFC-208	ENST00000512711	KIR3DS1	Q14943	382 aa		4.14	□□□□□ -1.75
PDGFC-208	ENST00000512711	CLEC16A	Q2KHT3	1053 aa		4.14	□□□□□ -1.75
PDGFC-208	ENST00000512711	DIEXF	Q68CQ4	756 aa	Known RBP	4.14	□□□□□ -1.75
PDGFC-208	ENST00000512711	LCNL1	Q6ZST4	164 aa		4.14	□□□□□ -1.75
PDGFC-208	ENST00000512711	HS2ST1	Q7LGA3	356 aa		4.14	□□□□□ -1.75
PDGFC-208	ENST00000512711	SLITRK4	Q8IW52	837 aa		4.14	□□□□□ -1.75
PDGFC-208	ENST00000512711	KCNN1	Q92952	543 aa		4.14	□□□□□ -1.75

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