RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 MIPEPQ99797 713 aa5.85□□□□□ -1.47
TOPBP1-208ENST00000511439 PRDM7Q9NQW5 492 aa5.85□□□□□ -1.47
TOPBP1-208ENST00000511439 TACC3Q9Y6A5 838 aa5.85□□□□□ -1.47
TOPBP1-208ENST00000511439 SLITRK5O94991 958 aa5.84□□□□□ -1.47
TOPBP1-208ENST00000511439 RAPGEF3O95398 923 aa5.84□□□□□ -1.47
TOPBP1-208ENST00000511439 SLBPQ14493 270 aaKnown RBP eCLIP5.84□□□□□ -1.47
TOPBP1-208ENST00000511439 INPP5AQ14642 412 aa5.84□□□□□ -1.47
TOPBP1-208ENST00000511439 ZNF124Q15973 351 aa5.84□□□□□ -1.47
TOPBP1-208ENST00000511439 TSNAXIP1Q2TAA8 658 aa5.84□□□□□ -1.47
TOPBP1-208ENST00000511439 KRTAP19-4Q3LI73 84 aa5.84□□□□□ -1.47
TOPBP1-208ENST00000511439 WIPI1Q5MNZ9 446 aaPredicted RBP5.84□□□□□ -1.47
TOPBP1-208ENST00000511439 LCE1DQ5T752 114 aa5.84□□□□□ -1.47
TOPBP1-208ENST00000511439 RASIP1Q5U651 963 aa5.84□□□□□ -1.47
TOPBP1-208ENST00000511439 DIEXFQ68CQ4 756 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-208ENST00000511439 TTBK2Q6IQ55 1244 aa5.84□□□□□ -1.47
TOPBP1-208ENST00000511439 THAP5Q7Z6K1 395 aa5.84□□□□□ -1.47
TOPBP1-208ENST00000511439 TMEM87AQ8NBN3 555 aa5.84□□□□□ -1.47
TOPBP1-208ENST00000511439 PPP1R16BQ96T49 567 aa5.84□□□□□ -1.47
TOPBP1-208ENST00000511439 KRTAP4-7Q9BYR0 210 aa5.84□□□□□ -1.47
TOPBP1-208ENST00000511439 FRMPD1Q5SYB0 1578 aa5.84□□□□□ -1.48
TOPBP1-208ENST00000511439 AKNAQ7Z591 1439 aa5.83□□□□□ -1.48
TOPBP1-208ENST00000511439 GLI1P08151 1106 aa5.83□□□□□ -1.48
TOPBP1-208ENST00000511439 KIR3DL1P43629 444 aa5.83□□□□□ -1.48
TOPBP1-208ENST00000511439 LETMD1Q6P1Q0 360 aa5.83□□□□□ -1.48
TOPBP1-208ENST00000511439 NPM2Q86SE8 214 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-208ENST00000511439 GAL3ST3Q96A11 431 aa5.83□□□□□ -1.48
TOPBP1-208ENST00000511439 HSPA12BQ96MM6 686 aa5.83□□□□□ -1.48
TOPBP1-208ENST00000511439 CARS2Q9HA77 564 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-208ENST00000511439 SEMA3GQ9NS98 782 aa5.83□□□□□ -1.48
TOPBP1-208ENST00000511439 WRNQ14191 1432 aaPredicted RBP eCLIP5.82□□□□□ -1.48
TOPBP1-208ENST00000511439 PTPRKQ15262 1439 aa5.82□□□□□ -1.48
TOPBP1-208ENST00000511439 ZNF503-AS2A6NEH8 195 aa5.82□□□□□ -1.48
TOPBP1-208ENST00000511439 E9PSI1 815 aa5.82□□□□□ -1.48
TOPBP1-208ENST00000511439 CST3P01034 146 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-208ENST00000511439 GDNFP39905 211 aa5.82□□□□□ -1.48
TOPBP1-208ENST00000511439 MESP2Q0VG99 397 aa5.82□□□□□ -1.48
TOPBP1-208ENST00000511439 MLANAQ16655 118 aa5.82□□□□□ -1.48
TOPBP1-208ENST00000511439 CDKAL1Q5VV42 579 aa5.82□□□□□ -1.48
TOPBP1-208ENST00000511439 KIRREL1Q96J84 757 aa5.82□□□□□ -1.48
TOPBP1-208ENST00000511439 NOC4LQ9BVI4 516 aaKnown RBP5.82□□□□□ -1.48
TOPBP1-208ENST00000511439 FBRSQ9HAH7 460 aa5.82□□□□□ -1.48
TOPBP1-208ENST00000511439 ARHGEF12Q9NZN5 1544 aa5.81□□□□□ -1.48
TOPBP1-208ENST00000511439 RLBP1P12271 317 aa5.81□□□□□ -1.48
TOPBP1-208ENST00000511439 PTPN11Q06124 597 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-208ENST00000511439 CCDC85BQ15834 202 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-208ENST00000511439 TMEM67Q5HYA8 995 aa5.81□□□□□ -1.48
TOPBP1-208ENST00000511439 MPZL3Q6UWV2 235 aa5.81□□□□□ -1.48
TOPBP1-208ENST00000511439 ATP13A1Q9HD20 1204 aa5.81□□□□□ -1.48
TOPBP1-208ENST00000511439 METTL5Q9NRN9 209 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-208ENST00000511439 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.81□□□□□ -1.48
TOPBP1-208ENST00000511439 CAPN6Q9Y6Q1 641 aa5.81□□□□□ -1.48
TOPBP1-208ENST00000511439 CPS1P31327 1500 aa5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 NEO1Q92859 1461 aa5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 PRR33A8MZF0 331 aa5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 H3BS24 57 aa5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 SCAMP3O14828 347 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 TSPAN15O95858 294 aa5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 GRK4P32298 578 aa5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 ETV3P41162 512 aa5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 RAP1GAPP47736 663 aa5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 FANCCQ00597 558 aa5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 PDE4BQ07343 736 aa5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 MLECQ14165 292 aa5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 NKG7Q16617 165 aa5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 PRAMEF13Q5VWM6 474 aa5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 PIWIL2Q8TC59 973 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 TOX2Q96NM4 488 aa5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 ALPK1Q96QP1 1244 aa5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 ST14Q9Y5Y6 855 aa5.8□□□□□ -1.48
TOPBP1-208ENST00000511439 CAMSAP1Q5T5Y3 1602 aa5.79□□□□□ -1.48
TOPBP1-208ENST00000511439 CBX7O95931 251 aa5.79□□□□□ -1.48
TOPBP1-208ENST00000511439 RAC2P15153 192 aa5.79□□□□□ -1.48
TOPBP1-208ENST00000511439 CEBPAP49715 358 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-208ENST00000511439 FBLN7Q53RD9 439 aa5.79□□□□□ -1.48
TOPBP1-208ENST00000511439 SLC6A19Q695T7 634 aa5.79□□□□□ -1.48
TOPBP1-208ENST00000511439 AGMOQ6ZNB7 445 aa5.79□□□□□ -1.48
TOPBP1-208ENST00000511439 TMPRSS7Q7RTY8 843 aa5.79□□□□□ -1.48
TOPBP1-208ENST00000511439 MRPL41Q8IXM3 137 aaKnown RBP5.79□□□□□ -1.48
TOPBP1-208ENST00000511439 LIN37Q96GY3 246 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-208ENST00000511439 MIR1-1HGQ9H1L0 117 aa5.79□□□□□ -1.48
TOPBP1-208ENST00000511439 EFCAB5A4FU69 1503 aa5.79□□□□□ -1.48
TOPBP1-208ENST00000511439 GFRA2O00451 464 aa5.78□□□□□ -1.48
TOPBP1-208ENST00000511439 ZNF76P36508 570 aa5.78□□□□□ -1.48
TOPBP1-208ENST00000511439 FYB2Q5VWT5 728 aa5.78□□□□□ -1.48
TOPBP1-208ENST00000511439 ZSCAN18Q8TBC5 510 aaPredicted RBP5.78□□□□□ -1.48
TOPBP1-208ENST00000511439 UBE2FQ969M7 185 aa5.78□□□□□ -1.48
TOPBP1-208ENST00000511439 RSRP1Q9BUV0 290 aa5.78□□□□□ -1.48
TOPBP1-208ENST00000511439 IGSF5Q9NSI5 407 aa5.78□□□□□ -1.48
TOPBP1-208ENST00000511439 ZFYVE16Q7Z3T8 1539 aa5.78□□□□□ -1.48
TOPBP1-208ENST00000511439 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-208ENST00000511439 PGRP06401 933 aa5.77□□□□□ -1.49
TOPBP1-208ENST00000511439 LIG3P49916 1009 aa5.77□□□□□ -1.49
TOPBP1-208ENST00000511439 SEPT6Q14141 434 aa5.77□□□□□ -1.49
TOPBP1-208ENST00000511439 SPOCD1Q6ZMY3 1216 aa5.77□□□□□ -1.49
TOPBP1-208ENST00000511439 HS2ST1Q7LGA3 356 aa5.77□□□□□ -1.49
TOPBP1-208ENST00000511439 ERMP1Q7Z2K6 904 aa5.77□□□□□ -1.49
TOPBP1-208ENST00000511439 METTL16Q86W50 562 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-208ENST00000511439 FBXO15Q8NCQ5 510 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-208ENST00000511439 RIN3Q8TB24 985 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 188.6 ms