RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 GFRA2O00451 464 aa3.62□□□□□ -1.83
HMGB3P3-201ENST00000510526 AFF3P51826 1226 aaKnown RBP3.62□□□□□ -1.83
HMGB3P3-201ENST00000510526 ATP2B2Q01814 1243 aa3.62□□□□□ -1.83
HMGB3P3-201ENST00000510526 SSPNQ14714 243 aa3.62□□□□□ -1.83
HMGB3P3-201ENST00000510526 TIGD5Q53EQ6 642 aa3.62□□□□□ -1.83
HMGB3P3-201ENST00000510526 TTBK2Q6IQ55 1244 aa3.62□□□□□ -1.83
HMGB3P3-201ENST00000510526 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P3-201ENST00000510526 MCATQ8IVS2 390 aaKnown RBP3.62□□□□□ -1.83
HMGB3P3-201ENST00000510526 DTWD2Q8NBA8 298 aa3.62□□□□□ -1.83
HMGB3P3-201ENST00000510526 DNAJB8Q8NHS0 232 aa3.62□□□□□ -1.83
HMGB3P3-201ENST00000510526 SGPP1Q9BX95 441 aa3.62□□□□□ -1.83
HMGB3P3-201ENST00000510526 OSBPL7Q9BZF2 842 aa3.62□□□□□ -1.83
HMGB3P3-201ENST00000510526 TJP2Q9UDY2 1190 aa3.62□□□□□ -1.83
HMGB3P3-201ENST00000510526 ADAM30Q9UKF2 790 aa3.62□□□□□ -1.83
HMGB3P3-201ENST00000510526 PCDHA11Q9Y5I1 949 aa3.62□□□□□ -1.83
HMGB3P3-201ENST00000510526 OTOL1A6NHN0 477 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P3-201ENST00000510526 SOWAHDA6NJG2 315 aa3.61□□□□□ -1.83
HMGB3P3-201ENST00000510526 WASH4PA8MWX3 477 aa3.61□□□□□ -1.83
HMGB3P3-201ENST00000510526 ABLIM1O14639 778 aa3.61□□□□□ -1.83
HMGB3P3-201ENST00000510526 PI3P19957 117 aa3.61□□□□□ -1.83
HMGB3P3-201ENST00000510526 CDK11BP21127 795 aaKnown RBP3.61□□□□□ -1.83
HMGB3P3-201ENST00000510526 MAPK8P45983 427 aa3.61□□□□□ -1.83
HMGB3P3-201ENST00000510526 ZXDCQ2QGD7 858 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P3-201ENST00000510526 SPATS1Q496A3 300 aa3.61□□□□□ -1.83
HMGB3P3-201ENST00000510526 GGNQ86UU5 652 aa3.61□□□□□ -1.83
HMGB3P3-201ENST00000510526 DACT3Q96B18 629 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P3-201ENST00000510526 TEPSINQ96N21 525 aa3.61□□□□□ -1.83
HMGB3P3-201ENST00000510526 FRMD6Q96NE9 622 aa3.61□□□□□ -1.83
HMGB3P3-201ENST00000510526 DPH2Q9BQC3 489 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P3-201ENST00000510526 C12orf49Q9H741 205 aa3.61□□□□□ -1.83
HMGB3P3-201ENST00000510526 BIN2Q9UBW5 565 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P3-201ENST00000510526 ZC3H12DA2A288 527 aaKnown RBP3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 SLC22A31A6NKX4 558 aa3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 N4BP3O15049 544 aa3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 PSPNO60542 156 aa3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 USP17L7P0C7H9 530 aa3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 MAPK1P28482 360 aa3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 CDK8P49336 464 aa3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 YARSP54577 528 aaKnown RBP3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 SRSF3P84103 164 aaKnown RBP3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 NFKB2Q00653 900 aa3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 ADGRF1Q5T601 910 aa3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 ZSCAN29Q8IWY8 852 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 CYB5D2Q8WUJ1 264 aa3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 RNF141Q8WVD5 230 aa3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 LINC01599Q8WXQ3 324 aa3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 TMPRSS5Q9H3S3 457 aa3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 LUC7LQ9NQ29 371 aaKnown RBP3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 CRTAC1Q9NQ79 661 aa3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 MBD1Q9UIS9 605 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 TTF2Q9UNY4 1162 aaKnown RBP3.6□□□□□ -1.83
HMGB3P3-201ENST00000510526 TEKQ02763 1124 aa3.59□□□□□ -1.83
HMGB3P3-201ENST00000510526 TSNAXIP1Q2TAA8 658 aa3.59□□□□□ -1.83
HMGB3P3-201ENST00000510526 SHISA4Q96DD7 197 aa3.59□□□□□ -1.83
HMGB3P3-201ENST00000510526 MIR1-1HGQ9H1L0 117 aa3.59□□□□□ -1.83
HMGB3P3-201ENST00000510526 SHROOM4Q9ULL8 1493 aa3.59□□□□□ -1.84
HMGB3P3-201ENST00000510526 RBM47A0AV96 593 aaKnown RBP3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 RLBP1P12271 317 aa3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 HSP90B1P14625 803 aaKnown RBP3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 KIR2DL1P43626 348 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 KIR2DL2P43627 348 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 KRTAP10-2P60368 255 aa3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 PLP2Q04941 152 aa3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 TMEM62Q0P6H9 643 aa3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 SEPT6Q14141 434 aa3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 CCDC85BQ15834 202 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 SLC14A2Q15849 920 aa3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 CLEC16AQ2KHT3 1053 aa3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 CNKSR3Q6P9H4 555 aa3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 RNF111Q6ZNA4 994 aa3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 AGMOQ6ZNB7 445 aa3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 FRMD5Q7Z6J6 570 aa3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 NLRX1Q86UT6 975 aa3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 FEZF2Q8TBJ5 459 aa3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 ENOX1Q8TC92 643 aaKnown RBP3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 PANK1Q8TE04 598 aa3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 ACSF2Q96CM8 615 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 ASPNQ9BXN1 380 aa3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 ASCC2Q9H1I8 757 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 CNOT11Q9UKZ1 510 aaKnown RBP3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 ZNF281Q9Y2X9 895 aa3.58□□□□□ -1.84
HMGB3P3-201ENST00000510526 IRS4O14654 1257 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 NRDCO43847 1150 aa3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 PNLIPP16233 465 aa3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 TNNI2P48788 182 aa3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 CHMP4BP1P59074 171 aa3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 YBX1P67809 324 aaKnown RBP3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 RPL6Q02878 288 aaKnown RBP3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 FMR1Q06787 632 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 EFEMP1Q12805 493 aa3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 SIRT2Q8IXJ6 389 aa3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 ZDHHC14Q8IZN3 488 aa3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 LINC01356Q8N9X3 169 aa3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 FAM13CQ8NE31 585 aa3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 EBF1Q9UH73 591 aa3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 PALD1Q9ULE6 856 aa3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 MYRFQ9Y2G1 1151 aa3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 CCDC9Q9Y3X0 531 aaKnown RBP3.57□□□□□ -1.84
HMGB3P3-201ENST00000510526 CILPO75339 1184 aa3.56□□□□□ -1.84
HMGB3P3-201ENST00000510526 MPOP05164 745 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms