RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 SPDYE16A6NNV3 312 aaPredicted RBP21.62■■□□□ 1.05
CLDND1-220ENST00000508902 USP17L15C9J2P7 530 aa21.62■■□□□ 1.05
CLDND1-220ENST00000508902 USP17L13C9JLJ4 530 aa21.62■■□□□ 1.05
CLDND1-220ENST00000508902 USP17L11C9JVI0 530 aa21.62■■□□□ 1.05
CLDND1-220ENST00000508902 USP17L18D6R9N7 530 aa21.62■■□□□ 1.05
CLDND1-220ENST00000508902 USP17L22D6RA61 530 aa21.62■■□□□ 1.05
CLDND1-220ENST00000508902 USP17L17D6RBQ6 530 aa21.62■■□□□ 1.05
CLDND1-220ENST00000508902 USP17L19D6RCP7 530 aa21.62■■□□□ 1.05
CLDND1-220ENST00000508902 USP17L20D6RJB6 530 aa21.62■■□□□ 1.05
CLDND1-220ENST00000508902 USP17L24Q0WX57 530 aa21.62■■□□□ 1.05
CLDND1-220ENST00000508902 NEDD1Q8NHV4 660 aa21.62■■□□□ 1.05
CLDND1-220ENST00000508902 ARHGEF10LQ9HCE6 1279 aa21.62■■□□□ 1.05
CLDND1-220ENST00000508902 IL17RBQ9NRM6 502 aa21.62■■□□□ 1.05
CLDND1-220ENST00000508902 KIAA0100Q14667 2235 aaKnown RBP21.61■■□□□ 1.05
CLDND1-220ENST00000508902 HIP1O00291 1037 aa21.61■■□□□ 1.05
CLDND1-220ENST00000508902 NMT2O60551 498 aa21.61■■□□□ 1.05
CLDND1-220ENST00000508902 GCLCP48506 637 aaPredicted RBP21.61■■□□□ 1.05
CLDND1-220ENST00000508902 ATP2B2Q01814 1243 aa21.61■■□□□ 1.05
CLDND1-220ENST00000508902 PRKCZQ05513 592 aa21.61■■□□□ 1.05
CLDND1-220ENST00000508902 MTMR4Q9NYA4 1195 aa21.61■■□□□ 1.05
CLDND1-220ENST00000508902 BTBD7Q9P203 1132 aa21.61■■□□□ 1.05
CLDND1-220ENST00000508902 NYAP2Q9P242 653 aa21.61■■□□□ 1.05
CLDND1-220ENST00000508902 NEDD4P46934 1319 aa21.6■■□□□ 1.05
CLDND1-220ENST00000508902 ORC4O43929 436 aa21.6■■□□□ 1.05
CLDND1-220ENST00000508902 TFAP4Q01664 338 aa21.6■■□□□ 1.05
CLDND1-220ENST00000508902 RASGRP2Q7LDG7 609 aa21.6■■□□□ 1.05
CLDND1-220ENST00000508902 NUP88Q99567 741 aaPredicted RBP21.6■■□□□ 1.05
CLDND1-220ENST00000508902 PORCNQ9H237 461 aa21.6■■□□□ 1.05
CLDND1-220ENST00000508902 SRRDQ9UH36 339 aa21.6■■□□□ 1.05
CLDND1-220ENST00000508902 RBBP6Q7Z6E9 1792 aaKnown RBP21.6■■□□□ 1.05
CLDND1-220ENST00000508902 CCDC85CA6NKD9 419 aa21.59■■□□□ 1.05
CLDND1-220ENST00000508902 PTH1RQ03431 593 aa21.59■■□□□ 1.05
CLDND1-220ENST00000508902 PDE4BQ07343 736 aa21.59■■□□□ 1.05
CLDND1-220ENST00000508902 LBX2Q6XYB7 198 aa21.59■■□□□ 1.05
CLDND1-220ENST00000508902 ZNF444Q8N0Y2 327 aaPredicted RBP21.59■■□□□ 1.05
CLDND1-220ENST00000508902 LRRC47Q8N1G4 583 aaKnown RBP21.59■■□□□ 1.05
CLDND1-220ENST00000508902 CCDC136Q96JN2 1154 aa21.59■■□□□ 1.05
CLDND1-220ENST00000508902 DSCC1Q9BVC3 393 aa21.59■■□□□ 1.05
CLDND1-220ENST00000508902 FBXO28Q9NVF7 368 aa21.59■■□□□ 1.05
CLDND1-220ENST00000508902 FMNL1O95466 1100 aaPredicted RBP21.58■■□□□ 1.05
CLDND1-220ENST00000508902 NDUFB10O96000 172 aa21.58■■□□□ 1.05
CLDND1-220ENST00000508902 NOVP48745 357 aa21.58■■□□□ 1.05
CLDND1-220ENST00000508902 ERVK-9P63128 1117 aa21.58■■□□□ 1.05
CLDND1-220ENST00000508902 ERVK-24P63145 666 aa21.58■■□□□ 1.05
CLDND1-220ENST00000508902 LPAR1Q92633 364 aa21.58■■□□□ 1.05
CLDND1-220ENST00000508902 MKL1Q969V6 931 aa21.58■■□□□ 1.05
CLDND1-220ENST00000508902 PAGR1Q9BTK6 254 aa21.58■■□□□ 1.05
CLDND1-220ENST00000508902 TAF6LQ9Y6J9 622 aa21.58■■□□□ 1.05
CLDND1-220ENST00000508902 MYPNQ86TC9 1320 aa21.57■■□□□ 1.04
CLDND1-220ENST00000508902 RAD50Q92878 1312 aa21.57■■□□□ 1.04
CLDND1-220ENST00000508902 MKI67P46013 3256 aaKnown RBP21.57■■□□□ 1.04
CLDND1-220ENST00000508902 WDR46O15213 610 aaKnown RBP21.57■■□□□ 1.04
CLDND1-220ENST00000508902 TNRC18O15417 2968 aaPredicted RBP21.57■■□□□ 1.04
CLDND1-220ENST00000508902 SGSM2O43147 1006 aa21.57■■□□□ 1.04
CLDND1-220ENST00000508902 TSPY3P0CV98 308 aa21.57■■□□□ 1.04
CLDND1-220ENST00000508902 TSPY8P0CW00 308 aa21.57■■□□□ 1.04
CLDND1-220ENST00000508902 FCGRTP55899 365 aa21.57■■□□□ 1.04
CLDND1-220ENST00000508902 KIF22Q14807 665 aa21.57■■□□□ 1.04
CLDND1-220ENST00000508902 STAG1Q8WVM7 1258 aa21.57■■□□□ 1.04
CLDND1-220ENST00000508902 ARMC5Q96C12 935 aa21.57■■□□□ 1.04
CLDND1-220ENST00000508902 ATG4CQ96DT6 458 aa21.57■■□□□ 1.04
CLDND1-220ENST00000508902 CLIP2Q9UDT6 1046 aa21.57■■□□□ 1.04
CLDND1-220ENST00000508902 MFAP1P55081 439 aaKnown RBP21.56■■□□□ 1.04
CLDND1-220ENST00000508902 FAM83BQ5T0W9 1011 aa21.56■■□□□ 1.04
CLDND1-220ENST00000508902 SH3TC2Q8TF17 1288 aa21.56■■□□□ 1.04
CLDND1-220ENST00000508902 TANGO6Q9C0B7 1094 aa21.56■■□□□ 1.04
CLDND1-220ENST00000508902 SH2D4AQ9H788 454 aa21.56■■□□□ 1.04
CLDND1-220ENST00000508902 ZNF287Q9HBT7 754 aa21.56■■□□□ 1.04
CLDND1-220ENST00000508902 GJD2Q9UKL4 321 aa21.56■■□□□ 1.04
CLDND1-220ENST00000508902 F5H6K3 240 aa21.55■■□□□ 1.04
CLDND1-220ENST00000508902 GNRH1P01148 92 aa21.55■■□□□ 1.04
CLDND1-220ENST00000508902 SLC3A2P08195 630 aaKnown RBP21.55■■□□□ 1.04
CLDND1-220ENST00000508902 DSG3P32926 999 aa21.55■■□□□ 1.04
CLDND1-220ENST00000508902 SOX10P56693 466 aa21.55■■□□□ 1.04
CLDND1-220ENST00000508902 KLRC3Q07444 240 aa21.55■■□□□ 1.04
CLDND1-220ENST00000508902 AKNAD1Q5T1N1 836 aa21.55■■□□□ 1.04
CLDND1-220ENST00000508902 RABGAP1Q9Y3P9 1069 aa21.55■■□□□ 1.04
CLDND1-220ENST00000508902 TSPY2A6NKD2 308 aa21.54■■□□□ 1.04
CLDND1-220ENST00000508902 TNPO2O14787 897 aaKnown RBP21.54■■□□□ 1.04
CLDND1-220ENST00000508902 RANBP6O60518 1105 aaKnown RBP21.54■■□□□ 1.04
CLDND1-220ENST00000508902 TTLL1O95922 423 aa21.54■■□□□ 1.04
CLDND1-220ENST00000508902 FLT3LGP49771 235 aa21.54■■□□□ 1.04
CLDND1-220ENST00000508902 BMP2KLQ5H9B9 411 aa21.54■■□□□ 1.04
CLDND1-220ENST00000508902 REPS2Q8NFH8 660 aa21.54■■□□□ 1.04
CLDND1-220ENST00000508902 GPRC5AQ8NFJ5 357 aa21.54■■□□□ 1.04
CLDND1-220ENST00000508902 ZNF333Q96JL9 665 aa21.54■■□□□ 1.04
CLDND1-220ENST00000508902 FLOT1O75955 427 aa21.53■■□□□ 1.04
CLDND1-220ENST00000508902 COG2Q14746 738 aa21.53■■□□□ 1.04
CLDND1-220ENST00000508902 RRP12Q5JTH9 1297 aaKnown RBP21.53■■□□□ 1.04
CLDND1-220ENST00000508902 RCSD1Q6JBY9 416 aa21.53■■□□□ 1.04
CLDND1-220ENST00000508902 GOPCQ9HD26 462 aa21.53■■□□□ 1.04
CLDND1-220ENST00000508902 ADAMTS5Q9UNA0 930 aa21.53■■□□□ 1.04
CLDND1-220ENST00000508902 ZNF236Q9UL36 1845 aa21.52■■□□□ 1.04
CLDND1-220ENST00000508902 PRMT2P55345 433 aa21.52■■□□□ 1.04
CLDND1-220ENST00000508902 GMCL1P1Q8NEA9 526 aa21.52■■□□□ 1.04
CLDND1-220ENST00000508902 GTF3C2Q8WUA4 911 aaPredicted RBP21.52■■□□□ 1.04
CLDND1-220ENST00000508902 NEFLP07196 543 aa21.51■■□□□ 1.03
CLDND1-220ENST00000508902 ELNP15502 786 aa21.51■■□□□ 1.03
CLDND1-220ENST00000508902 COL9A3Q14050 684 aaPredicted RBP21.51■■□□□ 1.03
CLDND1-220ENST00000508902 TMEM132BQ14DG7 1078 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms