RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 NBPF11Q86T75 865 aa23.92■■□□□ 1.42
HERC6-205ENST00000504905 SIAH1Q8IUQ4 282 aa23.92■■□□□ 1.42
HERC6-205ENST00000504905 NEDD1Q8NHV4 660 aa23.92■■□□□ 1.42
HERC6-205ENST00000504905 SMCR8Q8TEV9 937 aaPredicted RBP23.92■■□□□ 1.42
HERC6-205ENST00000504905 TMX2Q9Y320 296 aa23.92■■□□□ 1.42
HERC6-205ENST00000504905 TACC3Q9Y6A5 838 aa23.92■■□□□ 1.42
HERC6-205ENST00000504905 ADGRA2Q96PE1 1338 aa23.91■■□□□ 1.42
HERC6-205ENST00000504905 RANBP6O60518 1105 aaKnown RBP23.91■■□□□ 1.42
HERC6-205ENST00000504905 CDC45O75419 566 aa23.91■■□□□ 1.42
HERC6-205ENST00000504905 PCP11498 1178 aaKnown RBP23.91■■□□□ 1.42
HERC6-205ENST00000504905 HOXA7P31268 230 aaPredicted RBP23.91■■□□□ 1.42
HERC6-205ENST00000504905 PTH1RQ03431 593 aa23.91■■□□□ 1.42
HERC6-205ENST00000504905 RRP12Q5JTH9 1297 aaKnown RBP23.91■■□□□ 1.42
HERC6-205ENST00000504905 AKNAD1Q5T1N1 836 aa23.91■■□□□ 1.42
HERC6-205ENST00000504905 MFSD6Q6ZSS7 791 aa23.91■■□□□ 1.42
HERC6-205ENST00000504905 TBC1D10CQ8IV04 446 aa23.91■■□□□ 1.42
HERC6-205ENST00000504905 STAG1Q8WVM7 1258 aa23.91■■□□□ 1.42
HERC6-205ENST00000504905 ESYT1Q9BSJ8 1104 aa23.91■■□□□ 1.42
HERC6-205ENST00000504905 NBPF3Q9H094 633 aa23.91■■□□□ 1.42
HERC6-205ENST00000504905 ASCC2Q9H1I8 757 aaPredicted RBP23.91■■□□□ 1.42
HERC6-205ENST00000504905 RNF41Q9H4P4 317 aaPredicted RBP23.91■■□□□ 1.42
HERC6-205ENST00000504905 CPA4Q9UI42 421 aa23.91■■□□□ 1.42
HERC6-205ENST00000504905 IGKV6D-41A0A0C4DH26 115 aa23.9■■□□□ 1.42
HERC6-205ENST00000504905 VCAM1P19320 739 aa23.9■■□□□ 1.42
HERC6-205ENST00000504905 SLC9C1Q4G0N8 1177 aa23.9■■□□□ 1.42
HERC6-205ENST00000504905 C17orf99Q6UX52 265 aa23.9■■□□□ 1.42
HERC6-205ENST00000504905 KIAA1211Q6ZU35 1233 aa23.9■■□□□ 1.42
HERC6-205ENST00000504905 CEP95Q96GE4 821 aa23.9■■□□□ 1.42
HERC6-205ENST00000504905 NYAP2Q9P242 653 aa23.9■■□□□ 1.42
HERC6-205ENST00000504905 PTCH2Q9Y6C5 1203 aa23.9■■□□□ 1.42
HERC6-205ENST00000504905 LPAR1Q92633 364 aa23.89■■□□□ 1.41
HERC6-205ENST00000504905 VCPKMTQ9H867 229 aa23.89■■□□□ 1.41
HERC6-205ENST00000504905 GOPCQ9HD26 462 aa23.89■■□□□ 1.41
HERC6-205ENST00000504905 MTMR4Q9NYA4 1195 aa23.89■■□□□ 1.41
HERC6-205ENST00000504905 U3KPZ7 1027 aaPredicted RBP23.89■■□□□ 1.41
HERC6-205ENST00000504905 USP17L15C9J2P7 530 aa23.88■■□□□ 1.41
HERC6-205ENST00000504905 USP17L13C9JLJ4 530 aa23.88■■□□□ 1.41
HERC6-205ENST00000504905 USP17L11C9JVI0 530 aa23.88■■□□□ 1.41
HERC6-205ENST00000504905 USP17L18D6R9N7 530 aa23.88■■□□□ 1.41
HERC6-205ENST00000504905 USP17L22D6RA61 530 aa23.88■■□□□ 1.41
HERC6-205ENST00000504905 USP17L17D6RBQ6 530 aa23.88■■□□□ 1.41
HERC6-205ENST00000504905 USP17L19D6RCP7 530 aa23.88■■□□□ 1.41
HERC6-205ENST00000504905 USP17L20D6RJB6 530 aa23.88■■□□□ 1.41
HERC6-205ENST00000504905 USP17L24Q0WX57 530 aa23.88■■□□□ 1.41
HERC6-205ENST00000504905 RPAP3Q9H6T3 665 aaPredicted RBP23.88■■□□□ 1.41
HERC6-205ENST00000504905 CLIP2Q9UDT6 1046 aa23.88■■□□□ 1.41
HERC6-205ENST00000504905 RAD21O60216 631 aa23.87■■□□□ 1.41
HERC6-205ENST00000504905 TTLL1O95922 423 aa23.87■■□□□ 1.41
HERC6-205ENST00000504905 FXR1P51114 621 aaKnown RBP eCLIP23.87■■□□□ 1.41
HERC6-205ENST00000504905 PPP4R3BQ5MIZ7 849 aa23.87■■□□□ 1.41
HERC6-205ENST00000504905 SPICE1Q8N0Z3 855 aa23.87■■□□□ 1.41
HERC6-205ENST00000504905 BCRP11274 1271 aa23.86■■□□□ 1.41
HERC6-205ENST00000504905 GCLCP48506 637 aaPredicted RBP23.86■■□□□ 1.41
HERC6-205ENST00000504905 KIF22Q14807 665 aa23.86■■□□□ 1.41
HERC6-205ENST00000504905 KIAA1755Q5JYT7 1200 aa23.86■■□□□ 1.41
HERC6-205ENST00000504905 CATSPERGQ6ZRH7 1159 aa23.86■■□□□ 1.41
HERC6-205ENST00000504905 P2RX7Q99572 595 aaKnown RBP23.86■■□□□ 1.41
HERC6-205ENST00000504905 NEDD4P46934 1319 aa23.85■■□□□ 1.41
HERC6-205ENST00000504905 ANKRD13CQ8N6S4 541 aa23.85■■□□□ 1.41
HERC6-205ENST00000504905 ESR2Q92731 530 aa23.85■■□□□ 1.41
HERC6-205ENST00000504905 MAP4K1Q92918 833 aa23.85■■□□□ 1.41
HERC6-205ENST00000504905 TANGO6Q9C0B7 1094 aa23.85■■□□□ 1.41
HERC6-205ENST00000504905 ANO2Q9NQ90 1003 aa23.85■■□□□ 1.41
HERC6-205ENST00000504905 WDR46O15213 610 aaKnown RBP23.84■■□□□ 1.41
HERC6-205ENST00000504905 NT5C2P49902 561 aa23.84■■□□□ 1.41
HERC6-205ENST00000504905 HERVK_113P62684 666 aa23.84■■□□□ 1.41
HERC6-205ENST00000504905 LACTBP83111 547 aaPredicted RBP23.84■■□□□ 1.41
HERC6-205ENST00000504905 MKL1Q969V6 931 aa23.84■■□□□ 1.41
HERC6-205ENST00000504905 LSG1Q9H089 658 aaKnown RBP23.84■■□□□ 1.41
HERC6-205ENST00000504905 IL17RBQ9NRM6 502 aa23.84■■□□□ 1.41
HERC6-205ENST00000504905 STX8Q9UNK0 236 aa23.84■■□□□ 1.41
HERC6-205ENST00000504905 RBM8AQ9Y5S9 174 aaKnown RBP23.84■■□□□ 1.41
HERC6-205ENST00000504905 ZSWIM8A7E2V4 1837 aa23.83■■□□□ 1.41
HERC6-205ENST00000504905 NMT2O60551 498 aa23.83■■□□□ 1.41
HERC6-205ENST00000504905 GNRH1P01148 92 aa23.83■■□□□ 1.41
HERC6-205ENST00000504905 LRRC47Q8N1G4 583 aaKnown RBP23.83■■□□□ 1.41
HERC6-205ENST00000504905 GTF3C2Q8WUA4 911 aaPredicted RBP23.83■■□□□ 1.41
HERC6-205ENST00000504905 CNNM2Q9H8M5 875 aa23.83■■□□□ 1.41
HERC6-205ENST00000504905 SYNPO2Q9UMS6 1093 aa23.83■■□□□ 1.41
HERC6-205ENST00000504905 MGAMO43451 1857 aa23.83■■□□□ 1.4
HERC6-205ENST00000504905 F5H6K3 240 aa23.82■■□□□ 1.4
HERC6-205ENST00000504905 CYP21A2P08686 494 aa23.82■■□□□ 1.4
HERC6-205ENST00000504905 KLRC3Q07444 240 aa23.82■■□□□ 1.4
HERC6-205ENST00000504905 FAM110CQ1W6H9 321 aa23.82■■□□□ 1.4
HERC6-205ENST00000504905 KRT23Q9C075 422 aa23.82■■□□□ 1.4
HERC6-205ENST00000504905 TCP11L1Q9NUJ3 509 aa23.82■■□□□ 1.4
HERC6-205ENST00000504905 COLQQ9Y215 455 aaPredicted RBP23.82■■□□□ 1.4
HERC6-205ENST00000504905 B4E1Z4 1266 aa23.81■■□□□ 1.4
HERC6-205ENST00000504905 KDM4AO75164 1064 aa23.81■■□□□ 1.4
HERC6-205ENST00000504905 ECM2O94769 699 aaPredicted RBP23.81■■□□□ 1.4
HERC6-205ENST00000504905 NDUFB10O96000 172 aa23.81■■□□□ 1.4
HERC6-205ENST00000504905 PRMT2P55345 433 aa23.81■■□□□ 1.4
HERC6-205ENST00000504905 ARHGAP39Q9C0H5 1083 aa23.81■■□□□ 1.4
HERC6-205ENST00000504905 PARP14Q460N5 1801 aa23.81■■□□□ 1.4
HERC6-205ENST00000504905 FLOT1O75955 427 aa23.8■■□□□ 1.4
HERC6-205ENST00000504905 COG2Q14746 738 aa23.8■■□□□ 1.4
HERC6-205ENST00000504905 GMCL1P1Q8NEA9 526 aa23.8■■□□□ 1.4
HERC6-205ENST00000504905 SH3TC2Q8TF17 1288 aa23.8■■□□□ 1.4
HERC6-205ENST00000504905 PAGR1Q9BTK6 254 aa23.8■■□□□ 1.4
HERC6-205ENST00000504905 RLFQ13129 1914 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms