RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 SMC1BQ8NDV3 1235 aa6.87□□□□□ -1.31
HMGXB4-208ENST00000498325 FAM200AQ8TCP9 573 aa6.87□□□□□ -1.31
HMGXB4-208ENST00000498325 ZMYND15Q9H091 742 aa6.87□□□□□ -1.31
HMGXB4-208ENST00000498325 BSDC1Q9NW68 430 aaPredicted RBP6.87□□□□□ -1.31
HMGXB4-208ENST00000498325 ABI2Q9NYB9 513 aaPredicted RBP6.87□□□□□ -1.31
HMGXB4-208ENST00000498325 QSER1Q2KHR3 1735 aa6.87□□□□□ -1.31
HMGXB4-208ENST00000498325 NHSQ6T4R5 1651 aa6.87□□□□□ -1.31
HMGXB4-208ENST00000498325 COL3A1P02461 1466 aaPredicted RBP6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 KIF24Q5T7B8 1368 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 TUBGCP6Q96RT7 1819 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 ZBTB7CA1YPR0 619 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 MEGF11A6BM72 1044 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 E9PSI1 815 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 EXOC5O00471 708 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 GCP02774 474 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 CYP2E1P05181 493 aaPredicted RBP6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 FBLN1P23142 703 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 LMOD1P29536 600 aaPredicted RBP6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 IL13P35225 146 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 AMPHP49418 695 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 LBX1P52954 281 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 RRS1Q15050 365 aaKnown RBP6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 CCDC27Q2M243 656 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 LCE4AQ5TA78 99 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 ERICH6BQ5W0A0 696 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 C16orf46Q6P387 395 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 WDR63Q8IWG1 891 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 KCNH5Q8NCM2 988 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 SLC7A3Q8WY07 619 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 METTL22Q9BUU2 404 aaPredicted RBP6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 SAP130Q9H0E3 1048 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 KCPQ6ZWJ8 1503 aa6.86□□□□□ -1.31
HMGXB4-208ENST00000498325 CYP26A1O43174 497 aa6.85□□□□□ -1.31
HMGXB4-208ENST00000498325 CTCFP49711 727 aaPredicted RBP6.85□□□□□ -1.31
HMGXB4-208ENST00000498325 COL19A1Q14993 1142 aa6.85□□□□□ -1.31
HMGXB4-208ENST00000498325 NFKBIBQ15653 356 aa6.85□□□□□ -1.31
HMGXB4-208ENST00000498325 PAOXQ6QHF9 649 aa6.85□□□□□ -1.31
HMGXB4-208ENST00000498325 C12orf50Q8NA57 414 aaPredicted RBP6.85□□□□□ -1.31
HMGXB4-208ENST00000498325 AGBL5Q8NDL9 886 aa6.85□□□□□ -1.31
HMGXB4-208ENST00000498325 FLCNQ8NFG4 579 aa6.85□□□□□ -1.31
HMGXB4-208ENST00000498325 PLEKHF1Q96S99 279 aa6.85□□□□□ -1.31
HMGXB4-208ENST00000498325 FLT4P35916 1363 aa6.84□□□□□ -1.31
HMGXB4-208ENST00000498325 PIK3C2AO00443 1686 aa6.84□□□□□ -1.31
HMGXB4-208ENST00000498325 USP54Q70EL1 1684 aa6.84□□□□□ -1.31
HMGXB4-208ENST00000498325 ZNF521Q96K83 1311 aa6.84□□□□□ -1.31
HMGXB4-208ENST00000498325 FAM95CA0A1B0GW59 222 aa6.84□□□□□ -1.31
HMGXB4-208ENST00000498325 ARL4DP49703 201 aa6.84□□□□□ -1.31
HMGXB4-208ENST00000498325 SLFN5Q08AF3 891 aa6.84□□□□□ -1.31
HMGXB4-208ENST00000498325 C9orf131Q5VYM1 1079 aa6.84□□□□□ -1.31
HMGXB4-208ENST00000498325 SMIM5Q71RC9 77 aa6.84□□□□□ -1.31
HMGXB4-208ENST00000498325 SHISA5Q8N114 240 aa6.84□□□□□ -1.31
HMGXB4-208ENST00000498325 CALR3Q96L12 384 aaKnown RBP6.84□□□□□ -1.31
HMGXB4-208ENST00000498325 PRIMPOLQ96LW4 560 aa6.84□□□□□ -1.31
HMGXB4-208ENST00000498325 C10orf71Q711Q0 1435 aa6.84□□□□□ -1.32
HMGXB4-208ENST00000498325 WNK3Q9BYP7 1800 aa6.83□□□□□ -1.32
HMGXB4-208ENST00000498325 MAP3K19Q56UN5 1328 aa6.83□□□□□ -1.32
HMGXB4-208ENST00000498325 WDR17Q8IZU2 1322 aa6.83□□□□□ -1.32
HMGXB4-208ENST00000498325 PRKAR2BP31323 418 aa6.83□□□□□ -1.32
HMGXB4-208ENST00000498325 TMPOP42166 694 aaKnown RBP6.83□□□□□ -1.32
HMGXB4-208ENST00000498325 ZAP70P43403 619 aa6.83□□□□□ -1.32
HMGXB4-208ENST00000498325 RIPK4P57078 832 aa6.83□□□□□ -1.32
HMGXB4-208ENST00000498325 C19orf57Q0VDD7 668 aa6.83□□□□□ -1.32
HMGXB4-208ENST00000498325 EIF4A2Q14240 407 aaKnown RBP6.83□□□□□ -1.32
HMGXB4-208ENST00000498325 ARHGAP27Q6ZUM4 889 aa6.83□□□□□ -1.32
HMGXB4-208ENST00000498325 TRMT2AQ8IZ69 625 aaKnown RBP6.83□□□□□ -1.32
HMGXB4-208ENST00000498325 GPR152Q8TDT2 470 aa6.83□□□□□ -1.32
HMGXB4-208ENST00000498325 CYP4F12Q9HCS2 524 aa6.83□□□□□ -1.32
HMGXB4-208ENST00000498325 RCAN3Q9UKA8 241 aa6.83□□□□□ -1.32
HMGXB4-208ENST00000498325 PXDNLA1KZ92 1463 aa6.83□□□□□ -1.32
HMGXB4-208ENST00000498325 BTAF1O14981 1849 aa6.83□□□□□ -1.32
HMGXB4-208ENST00000498325 HMOX1P09601 288 aa6.82□□□□□ -1.32
HMGXB4-208ENST00000498325 HSPA8P11142 646 aaKnown RBP6.82□□□□□ -1.32
HMGXB4-208ENST00000498325 USP11P51784 963 aa6.82□□□□□ -1.32
HMGXB4-208ENST00000498325 CALD1Q05682 793 aaKnown RBP6.82□□□□□ -1.32
HMGXB4-208ENST00000498325 LMOD3Q0VAK6 560 aa6.82□□□□□ -1.32
HMGXB4-208ENST00000498325 NFE2L2Q16236 605 aa6.82□□□□□ -1.32
HMGXB4-208ENST00000498325 HSP90AB2PQ58FF8 381 aa6.82□□□□□ -1.32
HMGXB4-208ENST00000498325 ZNF648Q5T619 568 aaPredicted RBP6.82□□□□□ -1.32
HMGXB4-208ENST00000498325 DUSP27Q5VZP5 1158 aa6.82□□□□□ -1.32
HMGXB4-208ENST00000498325 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.82□□□□□ -1.32
HMGXB4-208ENST00000498325 SMG8Q8ND04 991 aaKnown RBP6.82□□□□□ -1.32
HMGXB4-208ENST00000498325 MYH16Q9H6N6 1097 aa6.82□□□□□ -1.32
HMGXB4-208ENST00000498325 RRP7AQ9Y3A4 280 aaKnown RBP6.82□□□□□ -1.32
HMGXB4-208ENST00000498325 RTL1A6NKG5 1358 aa6.82□□□□□ -1.32
HMGXB4-208ENST00000498325 IL16Q14005 1332 aa6.81□□□□□ -1.32
HMGXB4-208ENST00000498325 RNF123Q5XPI4 1314 aa6.81□□□□□ -1.32
HMGXB4-208ENST00000498325 KDM2BQ8NHM5 1336 aa6.81□□□□□ -1.32
HMGXB4-208ENST00000498325 TNFRSF10BO14763 440 aa6.81□□□□□ -1.32
HMGXB4-208ENST00000498325 TNRC18O15417 2968 aaPredicted RBP6.81□□□□□ -1.32
HMGXB4-208ENST00000498325 TIAF1O95411 115 aa6.81□□□□□ -1.32
HMGXB4-208ENST00000498325 HOXC9P31274 260 aa6.81□□□□□ -1.32
HMGXB4-208ENST00000498325 FBLN7Q53RD9 439 aa6.81□□□□□ -1.32
HMGXB4-208ENST00000498325 SULT6B1Q6IMI4 303 aa6.81□□□□□ -1.32
HMGXB4-208ENST00000498325 FBLIM1Q8WUP2 373 aa6.81□□□□□ -1.32
HMGXB4-208ENST00000498325 IP6K1Q92551 441 aa6.81□□□□□ -1.32
HMGXB4-208ENST00000498325 TBC1D32Q96NH3 1257 aa6.81□□□□□ -1.32
HMGXB4-208ENST00000498325 TMPRSS13Q9BYE2 586 aa6.81□□□□□ -1.32
HMGXB4-208ENST00000498325 SUGCTQ9HAC7 445 aa6.81□□□□□ -1.32
HMGXB4-208ENST00000498325 PAK6Q9NQU5 681 aaPredicted RBP6.81□□□□□ -1.32
HMGXB4-208ENST00000498325 KANSL3Q9P2N6 904 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms