RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 SLITRK5O94991 958 aa7.91□□□□□ -1.14
SSR3-208ENST00000496050 LONRF2Q1L5Z9 754 aa7.91□□□□□ -1.14
SSR3-208ENST00000496050 C2orf27AQ580R0 203 aa7.91□□□□□ -1.14
SSR3-208ENST00000496050 ZC3H12BQ5HYM0 836 aaKnown RBP7.91□□□□□ -1.14
SSR3-208ENST00000496050 AXDND1Q5T1B0 1012 aaPredicted RBP7.91□□□□□ -1.14
SSR3-208ENST00000496050 TDRD10Q5VZ19 366 aaKnown RBP7.91□□□□□ -1.14
SSR3-208ENST00000496050 SEZ6L2Q6UXD5 910 aa7.91□□□□□ -1.14
SSR3-208ENST00000496050 ZNF662Q6ZS27 426 aa7.91□□□□□ -1.14
SSR3-208ENST00000496050 ADAT2Q7Z6V5 191 aaKnown RBP7.91□□□□□ -1.14
SSR3-208ENST00000496050 CLEC10AQ8IUN9 316 aa7.91□□□□□ -1.14
SSR3-208ENST00000496050 ARMC10Q8N2F6 343 aa7.91□□□□□ -1.14
SSR3-208ENST00000496050 MEGF10Q96KG7 1140 aa7.91□□□□□ -1.14
SSR3-208ENST00000496050 FBXL18Q96ME1 805 aa7.91□□□□□ -1.14
SSR3-208ENST00000496050 KREMEN1Q96MU8 473 aa7.91□□□□□ -1.14
SSR3-208ENST00000496050 SPATA9Q9BWV2 254 aa7.91□□□□□ -1.14
SSR3-208ENST00000496050 MKRN2Q9H000 416 aaKnown RBP7.91□□□□□ -1.14
SSR3-208ENST00000496050 FAM86C1Q9NVL1 165 aa7.91□□□□□ -1.14
SSR3-208ENST00000496050 FANCLQ9NW38 375 aa7.91□□□□□ -1.14
SSR3-208ENST00000496050 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.91□□□□□ -1.14
SSR3-208ENST00000496050 KRBA1A5PL33 1030 aa7.9□□□□□ -1.14
SSR3-208ENST00000496050 C9IYK1 514 aa7.9□□□□□ -1.14
SSR3-208ENST00000496050 DYNC1LI2O43237 492 aaPredicted RBP7.9□□□□□ -1.14
SSR3-208ENST00000496050 DIAPH1O60610 1272 aaKnown RBP7.9□□□□□ -1.14
SSR3-208ENST00000496050 CDC45O75419 566 aa7.9□□□□□ -1.14
SSR3-208ENST00000496050 SLC10A6Q3KNW5 377 aa7.9□□□□□ -1.14
SSR3-208ENST00000496050 PLEKHG4Q58EX7 1191 aa7.9□□□□□ -1.14
SSR3-208ENST00000496050 BEND4Q6ZU67 534 aa7.9□□□□□ -1.14
SSR3-208ENST00000496050 PPFIBP1Q86W92 1011 aa7.9□□□□□ -1.14
SSR3-208ENST00000496050 C7orf61Q8IZ16 206 aa7.9□□□□□ -1.14
SSR3-208ENST00000496050 VWCEQ96DN2 955 aa7.9□□□□□ -1.14
SSR3-208ENST00000496050 ZNF512BQ96KM6 892 aaPredicted RBP7.9□□□□□ -1.14
SSR3-208ENST00000496050 HAUS7Q99871 368 aa7.9□□□□□ -1.14
SSR3-208ENST00000496050 GBP3Q9H0R5 595 aa7.9□□□□□ -1.14
SSR3-208ENST00000496050 SLKQ9H2G2 1235 aaPredicted RBP7.9□□□□□ -1.14
SSR3-208ENST00000496050 TMEM260Q9NX78 707 aa7.9□□□□□ -1.14
SSR3-208ENST00000496050 LRP2BPQ9P2M1 347 aa7.9□□□□□ -1.14
SSR3-208ENST00000496050 ESYT3A0FGR9 886 aa7.89□□□□□ -1.15
SSR3-208ENST00000496050 PPM1BO75688 479 aa7.89□□□□□ -1.15
SSR3-208ENST00000496050 EPHX1P07099 455 aa7.89□□□□□ -1.15
SSR3-208ENST00000496050 AUHQ13825 339 aaKnown RBP7.89□□□□□ -1.15
SSR3-208ENST00000496050 ZBTB38Q8NAP3 1195 aaPredicted RBP7.89□□□□□ -1.15
SSR3-208ENST00000496050 ZSWIM2Q8NEG5 633 aa7.89□□□□□ -1.15
SSR3-208ENST00000496050 RNF141Q8WVD5 230 aa7.89□□□□□ -1.15
SSR3-208ENST00000496050 SLC26A8Q96RN1 970 aa7.89□□□□□ -1.15
SSR3-208ENST00000496050 FAM83CQ9BQN1 747 aa7.89□□□□□ -1.15
SSR3-208ENST00000496050 ASPNQ9BXN1 380 aa7.89□□□□□ -1.15
SSR3-208ENST00000496050 KANSL2Q9H9L4 492 aa7.89□□□□□ -1.15
SSR3-208ENST00000496050 C1GALT1Q9NS00 363 aa7.89□□□□□ -1.15
SSR3-208ENST00000496050 FBXL21Q9UKT6 434 aa7.89□□□□□ -1.15
SSR3-208ENST00000496050 TPX2Q9ULW0 747 aaKnown RBP7.89□□□□□ -1.15
SSR3-208ENST00000496050 CCDC163A0A0D9SF12 145 aa7.88□□□□□ -1.15
SSR3-208ENST00000496050 RNF225M0QZC1 329 aaPredicted RBP7.88□□□□□ -1.15
SSR3-208ENST00000496050 CD247P20963 164 aa7.88□□□□□ -1.15
SSR3-208ENST00000496050 CDK5R2Q13319 367 aa7.88□□□□□ -1.15
SSR3-208ENST00000496050 TAF7LQ5H9L4 462 aa7.88□□□□□ -1.15
SSR3-208ENST00000496050 DCAF15Q66K64 600 aa7.88□□□□□ -1.15
SSR3-208ENST00000496050 C16orf86Q6ZW13 317 aa7.88□□□□□ -1.15
SSR3-208ENST00000496050 LRRN4CLQ8ND94 238 aa7.88□□□□□ -1.15
SSR3-208ENST00000496050 PPP1R14AQ96A00 147 aa7.88□□□□□ -1.15
SSR3-208ENST00000496050 COX4I2Q96KJ9 171 aa7.88□□□□□ -1.15
SSR3-208ENST00000496050 IPO9Q96P70 1041 aaKnown RBP7.88□□□□□ -1.15
SSR3-208ENST00000496050 KLHL25Q9H0H3 589 aa7.88□□□□□ -1.15
SSR3-208ENST00000496050 SUSD2Q9UGT4 822 aa7.88□□□□□ -1.15
SSR3-208ENST00000496050 LEMD3Q9Y2U8 911 aa7.88□□□□□ -1.15
SSR3-208ENST00000496050 SUGT1Q9Y2Z0 365 aa7.88□□□□□ -1.15
SSR3-208ENST00000496050 A0A087WZG4 1122 aa7.87□□□□□ -1.15
SSR3-208ENST00000496050 NOP56O00567 594 aaKnown RBP7.87□□□□□ -1.15
SSR3-208ENST00000496050 FAM153BP0C7A2 387 aa7.87□□□□□ -1.15
SSR3-208ENST00000496050 SQSTM1Q13501 440 aa7.87□□□□□ -1.15
SSR3-208ENST00000496050 HSP90AA2PQ14568 343 aaPredicted RBP7.87□□□□□ -1.15
SSR3-208ENST00000496050 NOL9Q5SY16 702 aaKnown RBP7.87□□□□□ -1.15
SSR3-208ENST00000496050 RNF187Q5TA31 235 aaPredicted RBP7.87□□□□□ -1.15
SSR3-208ENST00000496050 SYNPOQ8N3V7 929 aa7.87□□□□□ -1.15
SSR3-208ENST00000496050 TOP6BLQ8N6T0 577 aa7.87□□□□□ -1.15
SSR3-208ENST00000496050 FGD4Q96M96 766 aa7.87□□□□□ -1.15
SSR3-208ENST00000496050 DUSP23Q9BVJ7 150 aa7.87□□□□□ -1.15
SSR3-208ENST00000496050 TMX1Q9H3N1 280 aa7.87□□□□□ -1.15
SSR3-208ENST00000496050 WHRNQ9P202 907 aa7.87□□□□□ -1.15
SSR3-208ENST00000496050 KCNH3Q9ULD8 1083 aa7.87□□□□□ -1.15
SSR3-208ENST00000496050 ZNF451Q9Y4E5 1061 aa7.87□□□□□ -1.15
SSR3-208ENST00000496050 COL17A1Q9UMD9 1497 aaPredicted RBP7.87□□□□□ -1.15
SSR3-208ENST00000496050 PPP1R12AO14974 1030 aaPredicted RBP7.86□□□□□ -1.15
SSR3-208ENST00000496050 CBFA2T2O43439 604 aa7.86□□□□□ -1.15
SSR3-208ENST00000496050 EOMESO95936 686 aa7.86□□□□□ -1.15
SSR3-208ENST00000496050 ITGA4P13612 1032 aa7.86□□□□□ -1.15
SSR3-208ENST00000496050 HSP90B1P14625 803 aaKnown RBP7.86□□□□□ -1.15
SSR3-208ENST00000496050 TCEA2Q15560 299 aa7.86□□□□□ -1.15
SSR3-208ENST00000496050 NBPF9Q3BBW0 867 aa7.86□□□□□ -1.15
SSR3-208ENST00000496050 OGFOD3Q6PK18 319 aa7.86□□□□□ -1.15
SSR3-208ENST00000496050 RCC1LQ96I51 464 aaKnown RBP7.86□□□□□ -1.15
SSR3-208ENST00000496050 STOML1Q9UBI4 398 aa7.86□□□□□ -1.15
SSR3-208ENST00000496050 PCDHB12Q9Y5F1 795 aa7.86□□□□□ -1.15
SSR3-208ENST00000496050 PTCH2Q9Y6C5 1203 aa7.86□□□□□ -1.15
SSR3-208ENST00000496050 A0A1W2PQU0 124 aa7.85□□□□□ -1.15
SSR3-208ENST00000496050 CYP27C1Q4G0S4 372 aa7.85□□□□□ -1.15
SSR3-208ENST00000496050 SFRP5Q5T4F7 317 aa7.85□□□□□ -1.15
SSR3-208ENST00000496050 POMZP3Q6PJE2 187 aa7.85□□□□□ -1.15
SSR3-208ENST00000496050 CD163Q86VB7 1156 aa7.85□□□□□ -1.15
SSR3-208ENST00000496050 BVESQ8NE79 360 aa7.85□□□□□ -1.15
SSR3-208ENST00000496050 SSBP4Q9BWG4 385 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms