RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 ARMCX6Q7L4S7 300 aa4.99□□□□□ -1.61
DEPDC1-204ENST00000489862 ZNF507Q8TCN5 953 aa4.99□□□□□ -1.61
DEPDC1-204ENST00000489862 DACT3Q96B18 629 aaPredicted RBP4.99□□□□□ -1.61
DEPDC1-204ENST00000489862 SIGLEC10Q96LC7 697 aa4.99□□□□□ -1.61
DEPDC1-204ENST00000489862 FAM155AB1AL88 458 aaPredicted RBP4.98□□□□□ -1.61
DEPDC1-204ENST00000489862 MAGEA10P43363 369 aaPredicted RBP4.98□□□□□ -1.61
DEPDC1-204ENST00000489862 SEPT6Q14141 434 aa4.98□□□□□ -1.61
DEPDC1-204ENST00000489862 SLBPQ14493 270 aaKnown RBP eCLIP4.98□□□□□ -1.61
DEPDC1-204ENST00000489862 NKG7Q16617 165 aa4.98□□□□□ -1.61
DEPDC1-204ENST00000489862 WIPI1Q5MNZ9 446 aaPredicted RBP4.98□□□□□ -1.61
DEPDC1-204ENST00000489862 HDXQ7Z353 690 aa4.98□□□□□ -1.61
DEPDC1-204ENST00000489862 KCT2Q8NC54 265 aa4.98□□□□□ -1.61
DEPDC1-204ENST00000489862 HSPA12BQ96MM6 686 aa4.98□□□□□ -1.61
DEPDC1-204ENST00000489862 GCM1Q9NP62 436 aa4.98□□□□□ -1.61
DEPDC1-204ENST00000489862 PARP2Q9UGN5 583 aa4.98□□□□□ -1.61
DEPDC1-204ENST00000489862 CYR61O00622 381 aa4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 EIF5BO60841 1220 aaKnown RBP4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 LRIG2O94898 1065 aa4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 SLITRK5O94991 958 aa4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 DNAJC14Q6Y2X3 702 aaPredicted RBP4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 FAM161BQ96MY7 647 aa4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 WNT10AQ9GZT5 417 aa4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 USP35Q9P2H5 1018 aa4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 SNCAIPQ9Y6H5 919 aa4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 LMNB1P20700 586 aa4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 LIG3P49916 1009 aa4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 ETF1P62495 437 aaKnown RBP4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 RPS26P62854 115 aaKnown RBP4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 RTP5Q14D33 572 aa4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 RIN3Q8TB24 985 aa4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 PUS7Q96PZ0 661 aaKnown RBP4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 RNF32Q9H0A6 362 aa4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 ZNF552Q9H707 407 aaPredicted RBP4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 TMEM59LQ9UK28 342 aa4.97□□□□□ -1.61
DEPDC1-204ENST00000489862 PRR33A8MZF0 331 aa4.96□□□□□ -1.62
DEPDC1-204ENST00000489862 GFRA2O00451 464 aa4.96□□□□□ -1.62
DEPDC1-204ENST00000489862 CILPO75339 1184 aa4.96□□□□□ -1.62
DEPDC1-204ENST00000489862 GRK4P32298 578 aa4.96□□□□□ -1.62
DEPDC1-204ENST00000489862 DAB2P98082 770 aa4.96□□□□□ -1.62
DEPDC1-204ENST00000489862 FGD1P98174 961 aa4.96□□□□□ -1.62
DEPDC1-204ENST00000489862 TAGLNQ01995 201 aaKnown RBP4.96□□□□□ -1.62
DEPDC1-204ENST00000489862 PSMD2Q13200 908 aa4.96□□□□□ -1.62
DEPDC1-204ENST00000489862 AGMOQ6ZNB7 445 aa4.96□□□□□ -1.62
DEPDC1-204ENST00000489862 LILRA2Q8N149 483 aa4.96□□□□□ -1.62
DEPDC1-204ENST00000489862 MIPEPQ99797 713 aa4.96□□□□□ -1.62
DEPDC1-204ENST00000489862 SGPP1Q9BX95 441 aa4.96□□□□□ -1.62
DEPDC1-204ENST00000489862 CHMP4AQ9BY43 222 aa4.96□□□□□ -1.62
DEPDC1-204ENST00000489862 PRDM5Q9NQX1 630 aaPredicted RBP4.96□□□□□ -1.62
DEPDC1-204ENST00000489862 MAPK8IP1Q9UQF2 711 aa4.96□□□□□ -1.62
DEPDC1-204ENST00000489862 TLR6Q9Y2C9 796 aa4.96□□□□□ -1.62
DEPDC1-204ENST00000489862 CTSHP09668 335 aa4.95□□□□□ -1.62
DEPDC1-204ENST00000489862 HSP90B1P14625 803 aaKnown RBP4.95□□□□□ -1.62
DEPDC1-204ENST00000489862 TFE3P19532 575 aaPredicted RBP4.95□□□□□ -1.62
DEPDC1-204ENST00000489862 CDK11BP21127 795 aaKnown RBP4.95□□□□□ -1.62
DEPDC1-204ENST00000489862 HK2P52789 917 aa4.95□□□□□ -1.62
DEPDC1-204ENST00000489862 ERVFC1P60507 584 aa4.95□□□□□ -1.62
DEPDC1-204ENST00000489862 ADAM17P78536 824 aa4.95□□□□□ -1.62
DEPDC1-204ENST00000489862 HID1Q8IV36 788 aa4.95□□□□□ -1.62
DEPDC1-204ENST00000489862 XAGE3Q8WTP9 111 aa4.95□□□□□ -1.62
DEPDC1-204ENST00000489862 TPX2Q9ULW0 747 aaKnown RBP4.95□□□□□ -1.62
DEPDC1-204ENST00000489862 CDK11AQ9UQ88 783 aaPredicted RBP4.95□□□□□ -1.62
DEPDC1-204ENST00000489862 F6X3S4 739 aa4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 XPCQ01831 940 aaPredicted RBP4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 TAF1CQ15572 869 aaPredicted RBP4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 PRAMEF13Q5VWM6 474 aa4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 THAP5Q7Z6K1 395 aa4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 FBXO33Q7Z6M2 555 aa4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 MFSD2AQ8NA29 543 aa4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 SYT8Q8NBV8 401 aa4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 JARID2Q92833 1246 aaPredicted RBP4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 SCAND2PQ9GZW5 306 aaPredicted RBP4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 MIR1-1HGQ9H1L0 117 aa4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 CWC22Q9HCG8 908 aaKnown RBP4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 IGSF5Q9NSI5 407 aa4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 CAP2P40123 477 aa4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 ZFYVE27Q5T4F4 411 aa4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 CDKAL1Q5VV42 579 aa4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 USP51Q70EK9 711 aa4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 TMC4Q7Z404 712 aa4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 PANK1Q8TE04 598 aa4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 DPH2Q9BQC3 489 aaPredicted RBP4.94□□□□□ -1.62
DEPDC1-204ENST00000489862 USP31Q70CQ4 1352 aa4.93□□□□□ -1.62
DEPDC1-204ENST00000489862 H3BS24 57 aa4.93□□□□□ -1.62
DEPDC1-204ENST00000489862 CST3P01034 146 aaPredicted RBP4.93□□□□□ -1.62
DEPDC1-204ENST00000489862 PGRP06401 933 aa4.93□□□□□ -1.62
DEPDC1-204ENST00000489862 PDE6BP35913 854 aa4.93□□□□□ -1.62
DEPDC1-204ENST00000489862 SFRP5Q5T4F7 317 aa4.93□□□□□ -1.62
DEPDC1-204ENST00000489862 LETMD1Q6P1Q0 360 aa4.93□□□□□ -1.62
DEPDC1-204ENST00000489862 FAM177A1Q8N128 213 aaPredicted RBP4.93□□□□□ -1.62
DEPDC1-204ENST00000489862 TJP2Q9UDY2 1190 aa4.93□□□□□ -1.62
DEPDC1-204ENST00000489862 DNAJC25-GNG10A0A024R161 153 aa4.92□□□□□ -1.62
DEPDC1-204ENST00000489862 C1QTNF3-AMACRE9PGA6 284 aa4.92□□□□□ -1.62
DEPDC1-204ENST00000489862 CBX7O95931 251 aa4.92□□□□□ -1.62
DEPDC1-204ENST00000489862 C6P13671 934 aa4.92□□□□□ -1.62
DEPDC1-204ENST00000489862 ST13P50502 369 aaKnown RBP4.92□□□□□ -1.62
DEPDC1-204ENST00000489862 TSNAXIP1Q2TAA8 658 aa4.92□□□□□ -1.62
DEPDC1-204ENST00000489862 CDH24Q86UP0 819 aa4.92□□□□□ -1.62
DEPDC1-204ENST00000489862 PHC3Q8NDX5 983 aa4.92□□□□□ -1.62
DEPDC1-204ENST00000489862 INTS4Q96HW7 963 aaKnown RBP4.92□□□□□ -1.62
DEPDC1-204ENST00000489862 NOC4LQ9BVI4 516 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms