RNA–Protein interactions for RNA: ENST00000486889.1

CTPS1-210, Transcript of CTP synthase 1, humanhuman

TSL 2

Gene CTPS1, Length 568 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-210ENST00000486889 GPATCH4Q5T3I0 446 aaKnown RBP11.39□□□□□ -0.59
CTPS1-210ENST00000486889 CST9Q5W186 159 aa11.39□□□□□ -0.59
CTPS1-210ENST00000486889 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.39□□□□□ -0.59
CTPS1-210ENST00000486889 Q6ZUG5 572 aa11.39□□□□□ -0.59
CTPS1-210ENST00000486889 FBXL16Q8N461 479 aa11.39□□□□□ -0.59
CTPS1-210ENST00000486889 PNMA1Q8ND90 353 aa11.39□□□□□ -0.59
CTPS1-210ENST00000486889 ANKS1AQ92625 1134 aa11.39□□□□□ -0.59
CTPS1-210ENST00000486889 MKL1Q969V6 931 aa11.39□□□□□ -0.59
CTPS1-210ENST00000486889 OPTNQ96CV9 577 aa11.39□□□□□ -0.59
CTPS1-210ENST00000486889 LZTS2Q9BRK4 669 aa11.39□□□□□ -0.59
CTPS1-210ENST00000486889 ZKSCAN3Q9BRR0 538 aa11.39□□□□□ -0.59
CTPS1-210ENST00000486889 UPF3BQ9BZI7 483 aaKnown RBP11.39□□□□□ -0.59
CTPS1-210ENST00000486889 KIAA1683Q9H0B3 1180 aa11.39□□□□□ -0.59
CTPS1-210ENST00000486889 RBM28Q9NW13 759 aaKnown RBP11.39□□□□□ -0.59
CTPS1-210ENST00000486889 PNMA3Q9UL41 463 aa11.39□□□□□ -0.59
CTPS1-210ENST00000486889 PNMA2Q9UL42 364 aa11.39□□□□□ -0.59
CTPS1-210ENST00000486889 TMX2Q9Y320 296 aa11.39□□□□□ -0.59
CTPS1-210ENST00000486889 TRIM75PA6NK02 468 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 CPLX1O14810 134 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 ZBTB43O43298 467 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 CDKL5O76039 1030 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 HSP90AA1P07900 732 aaKnown RBP11.38□□□□□ -0.59
CTPS1-210ENST00000486889 SLC1A4P43007 532 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 EXOSC10Q01780 885 aaKnown RBP11.38□□□□□ -0.59
CTPS1-210ENST00000486889 NOGQ13253 232 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 STOX1Q6ZVD7 989 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 CYB5R4Q7L1T6 521 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 CHST3Q7LGC8 479 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 SGMS1Q86VZ5 419 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 HSCBQ8IWL3 235 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 ENAHQ8N8S7 591 aaPredicted RBP11.38□□□□□ -0.59
CTPS1-210ENST00000486889 PROCA1Q8NCQ7 364 aaPredicted RBP11.38□□□□□ -0.59
CTPS1-210ENST00000486889 GMCL1P1Q8NEA9 526 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 CHURC1Q8WUH1 139 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 DCAF4Q8WV16 495 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 MAP3K14Q99558 947 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 BEGAINQ9BUH8 593 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 INCENPQ9NQS7 918 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 SH2B1Q9NRF2 756 aaPredicted RBP11.38□□□□□ -0.59
CTPS1-210ENST00000486889 LIMCH1Q9UPQ0 1083 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 SNCAIPQ9Y6H5 919 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 DOCK1Q14185 1865 aa11.38□□□□□ -0.59
CTPS1-210ENST00000486889 SSC5DA1L4H1 1573 aa11.37□□□□□ -0.59
CTPS1-210ENST00000486889 SH2B2O14492 632 aaPredicted RBP11.37□□□□□ -0.59
CTPS1-210ENST00000486889 WDR46O15213 610 aaKnown RBP11.37□□□□□ -0.59
CTPS1-210ENST00000486889 PARP1P09874 1014 aaKnown RBP11.37□□□□□ -0.59
CTPS1-210ENST00000486889 FDX1P10109 184 aa11.37□□□□□ -0.59
CTPS1-210ENST00000486889 OSBPP22059 807 aa11.37□□□□□ -0.59
CTPS1-210ENST00000486889 AKAP17AQ02040 695 aaKnown RBP11.37□□□□□ -0.59
CTPS1-210ENST00000486889 FMR1Q06787 632 aaKnown RBP eCLIP11.37□□□□□ -0.59
CTPS1-210ENST00000486889 CCDC96Q2M329 555 aa11.37□□□□□ -0.59
CTPS1-210ENST00000486889 ASPRV1Q53RT3 343 aa11.37□□□□□ -0.59
CTPS1-210ENST00000486889 IGDCC4Q8TDY8 1250 aa11.37□□□□□ -0.59
CTPS1-210ENST00000486889 GTF3C2Q8WUA4 911 aaPredicted RBP11.37□□□□□ -0.59
CTPS1-210ENST00000486889 NUP133Q8WUM0 1156 aa11.37□□□□□ -0.59
CTPS1-210ENST00000486889 BRF1Q92994 677 aa11.37□□□□□ -0.59
CTPS1-210ENST00000486889 ZNF274Q96GC6 653 aaPredicted RBP11.37□□□□□ -0.59
CTPS1-210ENST00000486889 WNK4Q96J92 1243 aa11.37□□□□□ -0.59
CTPS1-210ENST00000486889 TMEM47Q9BQJ4 181 aa11.37□□□□□ -0.59
CTPS1-210ENST00000486889 SLKQ9H2G2 1235 aaPredicted RBP11.37□□□□□ -0.59
CTPS1-210ENST00000486889 VCPKMTQ9H867 229 aa11.37□□□□□ -0.59
CTPS1-210ENST00000486889 RBM27Q9P2N5 1060 aaKnown RBP11.37□□□□□ -0.59
CTPS1-210ENST00000486889 KIF3AQ9Y496 699 aa11.37□□□□□ -0.59
CTPS1-210ENST00000486889 AFG3L2Q9Y4W6 797 aa11.37□□□□□ -0.59
CTPS1-210ENST00000486889 WDR33Q9C0J8 1336 aaKnown RBP11.36□□□□□ -0.59
CTPS1-210ENST00000486889 IGKV6D-41A0A0C4DH26 115 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 KLF18A0A0U1RQI7 1052 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 F5H6K3 240 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 ALDH1A1P00352 501 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 METAP2P50579 478 aaKnown RBP eCLIP11.36□□□□□ -0.59
CTPS1-210ENST00000486889 KLRC3Q07444 240 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 MTMR2Q13614 643 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 SPRYD7Q5W111 196 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 SLFN13Q68D06 897 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 DLK2Q6UY11 383 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 GADL1Q6ZQY3 521 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 MOB2Q70IA6 237 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 FAM160B2Q86V87 743 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 ZNF654Q8IZM8 581 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 GMCL1Q96IK5 515 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 TANGO6Q9C0B7 1094 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 LY9Q9HBG7 655 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 IL17RBQ9NRM6 502 aa11.36□□□□□ -0.59
CTPS1-210ENST00000486889 GOLGA8AA7E2F4 631 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 GOLGA8BA8MQT2 603 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 USP17L15C9J2P7 530 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 USP17L13C9JLJ4 530 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 USP17L11C9JVI0 530 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 USP17L18D6R9N7 530 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 USP17L22D6RA61 530 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 USP17L17D6RBQ6 530 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 USP17L19D6RCP7 530 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 USP17L20D6RJB6 530 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 IRF6O14896 467 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 FOXN1O15353 648 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 NMT2O60551 498 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 BMP3P12645 472 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 NOVP48745 357 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 STAT2P52630 851 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 AK2P54819 239 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms