RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ADD1P35611 737 aaKnown RBP8.47□□□□□ -1.05
HDAC3-209ENST00000486618 GMPRP36959 345 aa8.47□□□□□ -1.05
HDAC3-209ENST00000486618 CCL15Q16663 113 aa8.47□□□□□ -1.05
HDAC3-209ENST00000486618 UBE3BQ7Z3V4 1068 aa8.47□□□□□ -1.05
HDAC3-209ENST00000486618 CERS5Q8N5B7 392 aa8.47□□□□□ -1.05
HDAC3-209ENST00000486618 IPO4Q8TEX9 1081 aaKnown RBP8.47□□□□□ -1.05
HDAC3-209ENST00000486618 DPF3Q92784 378 aa8.47□□□□□ -1.05
HDAC3-209ENST00000486618 ADAMTS8Q9UP79 889 aa8.47□□□□□ -1.05
HDAC3-209ENST00000486618 CSADQ9Y600 493 aa8.47□□□□□ -1.05
HDAC3-209ENST00000486618 MYBBP1AQ9BQG0 1328 aaKnown RBP8.47□□□□□ -1.05
HDAC3-209ENST00000486618 ANKRD18BA2A2Z9 1011 aa8.46□□□□□ -1.06
HDAC3-209ENST00000486618 CSF1RP07333 972 aa8.46□□□□□ -1.06
HDAC3-209ENST00000486618 IL1R1P14778 569 aa8.46□□□□□ -1.06
HDAC3-209ENST00000486618 TNNI2P48788 182 aa8.46□□□□□ -1.06
HDAC3-209ENST00000486618 INSM1Q01101 510 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-209ENST00000486618 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.46□□□□□ -1.06
HDAC3-209ENST00000486618 CWF19L2Q2TBE0 894 aaKnown RBP8.46□□□□□ -1.06
HDAC3-209ENST00000486618 TMTC2Q8N394 836 aa8.46□□□□□ -1.06
HDAC3-209ENST00000486618 C8orf58Q8NAV2 365 aa8.46□□□□□ -1.06
HDAC3-209ENST00000486618 BRI3BPQ8WY22 251 aa8.46□□□□□ -1.06
HDAC3-209ENST00000486618 HTATIP2Q9BUP3 242 aa8.46□□□□□ -1.06
HDAC3-209ENST00000486618 ZCCHC17Q9NP64 241 aaKnown RBP8.46□□□□□ -1.06
HDAC3-209ENST00000486618 CYLDQ9NQC7 956 aa8.46□□□□□ -1.06
HDAC3-209ENST00000486618 PCDHAC2Q9Y5I4 1007 aa8.46□□□□□ -1.06
HDAC3-209ENST00000486618 MKI67P46013 3256 aaKnown RBP8.45□□□□□ -1.06
HDAC3-209ENST00000486618 FIGNL2A6NMB9 653 aa8.45□□□□□ -1.06
HDAC3-209ENST00000486618 DLL1O00548 723 aa8.45□□□□□ -1.06
HDAC3-209ENST00000486618 TLR2O60603 784 aa8.45□□□□□ -1.06
HDAC3-209ENST00000486618 PPFIA3O75145 1194 aa8.45□□□□□ -1.06
HDAC3-209ENST00000486618 MYCP01106 439 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-209ENST00000486618 CETPP11597 493 aa8.45□□□□□ -1.06
HDAC3-209ENST00000486618 HOXD10P28358 340 aa8.45□□□□□ -1.06
HDAC3-209ENST00000486618 CTSOP43234 321 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-209ENST00000486618 CAP1Q01518 475 aa8.45□□□□□ -1.06
HDAC3-209ENST00000486618 KCNA1Q09470 495 aa8.45□□□□□ -1.06
HDAC3-209ENST00000486618 OS9Q13438 667 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-209ENST00000486618 GCKRQ14397 625 aa8.45□□□□□ -1.06
HDAC3-209ENST00000486618 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-209ENST00000486618 KDF1Q8NAX2 398 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-209ENST00000486618 SLC17A8Q8NDX2 589 aa8.45□□□□□ -1.06
HDAC3-209ENST00000486618 SH3TC2Q8TF17 1288 aa8.45□□□□□ -1.06
HDAC3-209ENST00000486618 INSM2Q96T92 566 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-209ENST00000486618 ZNF395Q9H8N7 513 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-209ENST00000486618 ZNF70Q9UC06 446 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-209ENST00000486618 PPME1Q9Y570 386 aa8.45□□□□□ -1.06
HDAC3-209ENST00000486618 NR2E3Q9Y5X4 410 aa8.45□□□□□ -1.06
HDAC3-209ENST00000486618 HTTP42858 3142 aa8.44□□□□□ -1.06
HDAC3-209ENST00000486618 TAF5LO75529 589 aa8.44□□□□□ -1.06
HDAC3-209ENST00000486618 VSIG8P0DPA2 414 aa8.44□□□□□ -1.06
HDAC3-209ENST00000486618 LACTBP83111 547 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-209ENST00000486618 IFIT5Q13325 482 aaKnown RBP8.44□□□□□ -1.06
HDAC3-209ENST00000486618 VGLL4Q14135 290 aa8.44□□□□□ -1.06
HDAC3-209ENST00000486618 FAM43AQ8N2R8 423 aa8.44□□□□□ -1.06
HDAC3-209ENST00000486618 HOOK2Q96ED9 719 aa8.44□□□□□ -1.06
HDAC3-209ENST00000486618 TDRD3Q9H7E2 651 aaKnown RBP8.44□□□□□ -1.06
HDAC3-209ENST00000486618 TTF2Q9UNY4 1162 aaKnown RBP8.44□□□□□ -1.06
HDAC3-209ENST00000486618 IRS2Q9Y4H2 1338 aa8.44□□□□□ -1.06
HDAC3-209ENST00000486618 OTOFQ9HC10 1997 aa8.44□□□□□ -1.06
HDAC3-209ENST00000486618 CACNA1FO60840 1977 aa8.43□□□□□ -1.06
HDAC3-209ENST00000486618 TCP10L2B9ZVM9 353 aa8.43□□□□□ -1.06
HDAC3-209ENST00000486618 SNAP23O00161 211 aa8.43□□□□□ -1.06
HDAC3-209ENST00000486618 APAF1O14727 1248 aa8.43□□□□□ -1.06
HDAC3-209ENST00000486618 ERCC3P19447 782 aa8.43□□□□□ -1.06
HDAC3-209ENST00000486618 MCCD1P59942 119 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-209ENST00000486618 PTSQ03393 145 aa8.43□□□□□ -1.06
HDAC3-209ENST00000486618 SNAPC2Q13487 334 aa8.43□□□□□ -1.06
HDAC3-209ENST00000486618 MFSD14BQ5SR56 506 aa8.43□□□□□ -1.06
HDAC3-209ENST00000486618 ERO1BQ86YB8 467 aa8.43□□□□□ -1.06
HDAC3-209ENST00000486618 DZIP1LQ8IYY4 767 aaKnown RBP8.43□□□□□ -1.06
HDAC3-209ENST00000486618 LINS1Q8NG48 757 aa8.43□□□□□ -1.06
HDAC3-209ENST00000486618 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.43□□□□□ -1.06
HDAC3-209ENST00000486618 TEPSINQ96N21 525 aa8.43□□□□□ -1.06
HDAC3-209ENST00000486618 POLMQ9NP87 494 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-209ENST00000486618 JAG2Q9Y219 1238 aa8.43□□□□□ -1.06
HDAC3-209ENST00000486618 FAM205AQ6ZU69 1335 aa8.43□□□□□ -1.06
HDAC3-209ENST00000486618 CUL9Q8IWT3 2517 aa8.43□□□□□ -1.06
HDAC3-209ENST00000486618 A0A1W2PPC1 479 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 BTBD19C9JJ37 291 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 PLIN1O60240 522 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 GJB1P08034 283 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 CAPN2P17655 700 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 GRK4P32298 578 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 PTGIRP43119 386 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 CASP7P55210 303 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 UBXN2AP68543 259 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 CCDC57Q2TAC2 916 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 LDHAL6AQ6ZMR3 332 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 FAM43BQ6ZT52 329 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-209ENST00000486618 TSPYL6Q8N831 410 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 TDRD7Q8NHU6 1098 aaKnown RBP8.42□□□□□ -1.06
HDAC3-209ENST00000486618 RNF217Q8TC41 542 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 RAET1EQ8TD07 263 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 DNAAF4Q8WXU2 420 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 SECISBP2LQ93073 1101 aaKnown RBP8.42□□□□□ -1.06
HDAC3-209ENST00000486618 YTHDC1Q96MU7 727 aaKnown RBP8.42□□□□□ -1.06
HDAC3-209ENST00000486618 ARHGAP39Q9C0H5 1083 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 TMEM39BQ9GZU3 492 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 CNNM1Q9NRU3 951 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 TMOD2Q9NZR1 351 aa8.42□□□□□ -1.06
HDAC3-209ENST00000486618 BIN2Q9UBW5 565 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms