RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 SSRP1Q08945 709 aaKnown RBP7.57□□□□□ -1.2
SRRM1-213ENST00000485441 MAP7Q14244 749 aa7.57□□□□□ -1.2
SRRM1-213ENST00000485441 LONRF2Q1L5Z9 754 aa7.57□□□□□ -1.2
SRRM1-213ENST00000485441 TDRD10Q5VZ19 366 aaKnown RBP7.57□□□□□ -1.2
SRRM1-213ENST00000485441 KIAA0907Q7Z7F0 614 aaPredicted RBP7.57□□□□□ -1.2
SRRM1-213ENST00000485441 SGSM3Q96HU1 749 aa7.57□□□□□ -1.2
SRRM1-213ENST00000485441 FBXL18Q96ME1 805 aa7.57□□□□□ -1.2
SRRM1-213ENST00000485441 KREMEN1Q96MU8 473 aa7.57□□□□□ -1.2
SRRM1-213ENST00000485441 SPATA9Q9BWV2 254 aa7.57□□□□□ -1.2
SRRM1-213ENST00000485441 LGR6Q9HBX8 967 aa7.57□□□□□ -1.2
SRRM1-213ENST00000485441 PRDM10Q9NQV6 1147 aa7.57□□□□□ -1.2
SRRM1-213ENST00000485441 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.57□□□□□ -1.2
SRRM1-213ENST00000485441 ANKRD34BA5PLL1 514 aa7.56□□□□□ -1.2
SRRM1-213ENST00000485441 EPHX1P07099 455 aa7.56□□□□□ -1.2
SRRM1-213ENST00000485441 FAM153BP0C7A2 387 aa7.56□□□□□ -1.2
SRRM1-213ENST00000485441 GATA6Q92908 595 aa7.56□□□□□ -1.2
SRRM1-213ENST00000485441 ZNF512BQ96KM6 892 aaPredicted RBP7.56□□□□□ -1.2
SRRM1-213ENST00000485441 MIPEPQ99797 713 aa7.56□□□□□ -1.2
SRRM1-213ENST00000485441 HAUS7Q99871 368 aa7.56□□□□□ -1.2
SRRM1-213ENST00000485441 FAM95CA0A1B0GW59 222 aa7.55□□□□□ -1.2
SRRM1-213ENST00000485441 A0A1W2PQU0 124 aa7.55□□□□□ -1.2
SRRM1-213ENST00000485441 ANKRD62A6NC57 917 aa7.55□□□□□ -1.2
SRRM1-213ENST00000485441 DCAF15Q66K64 600 aa7.55□□□□□ -1.2
SRRM1-213ENST00000485441 ZBTB38Q8NAP3 1195 aaPredicted RBP7.55□□□□□ -1.2
SRRM1-213ENST00000485441 APPBP2Q92624 585 aa7.55□□□□□ -1.2
SRRM1-213ENST00000485441 UTP4Q969X6 686 aaKnown RBP7.55□□□□□ -1.2
SRRM1-213ENST00000485441 APBA2Q99767 749 aa7.55□□□□□ -1.2
SRRM1-213ENST00000485441 YIPF2Q9BWQ6 316 aa7.55□□□□□ -1.2
SRRM1-213ENST00000485441 ZNF451Q9Y4E5 1061 aa7.55□□□□□ -1.2
SRRM1-213ENST00000485441 PTCH2Q9Y6C5 1203 aa7.55□□□□□ -1.2
SRRM1-213ENST00000485441 CD247P20963 164 aa7.54□□□□□ -1.2
SRRM1-213ENST00000485441 CHRNA4P43681 627 aa7.54□□□□□ -1.2
SRRM1-213ENST00000485441 AUHQ13825 339 aaKnown RBP7.54□□□□□ -1.2
SRRM1-213ENST00000485441 NBPF9Q3BBW0 867 aa7.54□□□□□ -1.2
SRRM1-213ENST00000485441 CD163Q86VB7 1156 aa7.54□□□□□ -1.2
SRRM1-213ENST00000485441 HOMER1Q86YM7 354 aa7.54□□□□□ -1.2
SRRM1-213ENST00000485441 C7orf61Q8IZ16 206 aa7.54□□□□□ -1.2
SRRM1-213ENST00000485441 RNF141Q8WVD5 230 aa7.54□□□□□ -1.2
SRRM1-213ENST00000485441 DUSP23Q9BVJ7 150 aa7.54□□□□□ -1.2
SRRM1-213ENST00000485441 FAM86C1Q9NVL1 165 aa7.54□□□□□ -1.2
SRRM1-213ENST00000485441 APEX2Q9UBZ4 518 aa7.54□□□□□ -1.2
SRRM1-213ENST00000485441 CDC45O75419 566 aa7.53□□□□□ -1.2
SRRM1-213ENST00000485441 LEFTY1O75610 366 aa7.53□□□□□ -1.2
SRRM1-213ENST00000485441 CDK5R2Q13319 367 aa7.53□□□□□ -1.2
SRRM1-213ENST00000485441 FOXB2Q5VYV0 432 aa7.53□□□□□ -1.2
SRRM1-213ENST00000485441 HEATR6Q6AI08 1181 aaKnown RBP7.53□□□□□ -1.2
SRRM1-213ENST00000485441 C16orf86Q6ZW13 317 aa7.53□□□□□ -1.2
SRRM1-213ENST00000485441 CLEC10AQ8IUN9 316 aa7.53□□□□□ -1.2
SRRM1-213ENST00000485441 CCDC144CPQ8IYA2 1237 aa7.53□□□□□ -1.2
SRRM1-213ENST00000485441 LRRC47Q8N1G4 583 aaKnown RBP7.53□□□□□ -1.2
SRRM1-213ENST00000485441 FAM83CQ9BQN1 747 aa7.53□□□□□ -1.2
SRRM1-213ENST00000485441 A0A087WZG4 1122 aa7.52□□□□□ -1.21
SRRM1-213ENST00000485441 IQCA1LA6NCM1 817 aa7.52□□□□□ -1.21
SRRM1-213ENST00000485441 ETV3P41162 512 aa7.52□□□□□ -1.21
SRRM1-213ENST00000485441 NFKBIBQ15653 356 aa7.52□□□□□ -1.21
SRRM1-213ENST00000485441 TKFCQ3LXA3 575 aa7.52□□□□□ -1.21
SRRM1-213ENST00000485441 BEND4Q6ZU67 534 aa7.52□□□□□ -1.21
SRRM1-213ENST00000485441 RCC1LQ96I51 464 aaKnown RBP7.52□□□□□ -1.21
SRRM1-213ENST00000485441 DCAF5Q96JK2 942 aa7.52□□□□□ -1.21
SRRM1-213ENST00000485441 MRGPRX3Q96LB0 322 aa7.52□□□□□ -1.21
SRRM1-213ENST00000485441 FGD4Q96M96 766 aa7.52□□□□□ -1.21
SRRM1-213ENST00000485441 ASPNQ9BXN1 380 aa7.52□□□□□ -1.21
SRRM1-213ENST00000485441 GP6Q9HCN6 339 aa7.52□□□□□ -1.21
SRRM1-213ENST00000485441 ARHGEF4Q9NR80 690 aa7.52□□□□□ -1.21
SRRM1-213ENST00000485441 C1QTNF9BB2RNN3 333 aa7.51□□□□□ -1.21
SRRM1-213ENST00000485441 DHX15O43143 795 aaKnown RBP7.51□□□□□ -1.21
SRRM1-213ENST00000485441 LRRN2O75325 713 aa7.51□□□□□ -1.21
SRRM1-213ENST00000485441 ITGAVP06756 1048 aa7.51□□□□□ -1.21
SRRM1-213ENST00000485441 RXRBP28702 533 aa7.51□□□□□ -1.21
SRRM1-213ENST00000485441 ADMP35318 185 aa7.51□□□□□ -1.21
SRRM1-213ENST00000485441 RNF4P78317 190 aa7.51□□□□□ -1.21
SRRM1-213ENST00000485441 SV2CQ496J9 727 aa7.51□□□□□ -1.21
SRRM1-213ENST00000485441 ZC3H12BQ5HYM0 836 aaKnown RBP7.51□□□□□ -1.21
SRRM1-213ENST00000485441 ARHGEF39Q8N4T4 335 aa7.51□□□□□ -1.21
SRRM1-213ENST00000485441 TOP6BLQ8N6T0 577 aa7.51□□□□□ -1.21
SRRM1-213ENST00000485441 ZSWIM2Q8NEG5 633 aa7.51□□□□□ -1.21
SRRM1-213ENST00000485441 KISS1RQ969F8 398 aaPredicted RBP7.51□□□□□ -1.21
SRRM1-213ENST00000485441 HEXIM2Q96MH2 286 aaKnown RBP7.51□□□□□ -1.21
SRRM1-213ENST00000485441 LGR4Q9BXB1 951 aa7.51□□□□□ -1.21
SRRM1-213ENST00000485441 CLSTN1O94985 981 aa7.5□□□□□ -1.21
SRRM1-213ENST00000485441 NAT2P11245 290 aa7.5□□□□□ -1.21
SRRM1-213ENST00000485441 GSK3AP49840 483 aa7.5□□□□□ -1.21
SRRM1-213ENST00000485441 ZNF445P59923 1031 aa7.5□□□□□ -1.21
SRRM1-213ENST00000485441 SNW1Q13573 536 aaKnown RBP7.5□□□□□ -1.21
SRRM1-213ENST00000485441 TMEM67Q5HYA8 995 aa7.5□□□□□ -1.21
SRRM1-213ENST00000485441 OGFOD3Q6PK18 319 aa7.5□□□□□ -1.21
SRRM1-213ENST00000485441 PAOXQ6QHF9 649 aa7.5□□□□□ -1.21
SRRM1-213ENST00000485441 SHISA5Q8N114 240 aa7.5□□□□□ -1.21
SRRM1-213ENST00000485441 Q96M66 194 aa7.5□□□□□ -1.21
SRRM1-213ENST00000485441 MKRN2Q9H000 416 aaKnown RBP7.5□□□□□ -1.21
SRRM1-213ENST00000485441 WHRNQ9P202 907 aa7.5□□□□□ -1.21
SRRM1-213ENST00000485441 PPP1R12AO14974 1030 aaPredicted RBP7.49□□□□□ -1.21
SRRM1-213ENST00000485441 NCLP19338 710 aaKnown RBP7.49□□□□□ -1.21
SRRM1-213ENST00000485441 GYS2P54840 703 aa7.49□□□□□ -1.21
SRRM1-213ENST00000485441 PPP2R2AP63151 447 aa7.49□□□□□ -1.21
SRRM1-213ENST00000485441 GPAT2Q6NUI2 795 aa7.49□□□□□ -1.21
SRRM1-213ENST00000485441 C22orf34Q6ZV56 151 aa7.49□□□□□ -1.21
SRRM1-213ENST00000485441 ZNF227Q86WZ6 799 aa7.49□□□□□ -1.21
SRRM1-213ENST00000485441 SYNPOQ8N3V7 929 aa7.49□□□□□ -1.21
SRRM1-213ENST00000485441 LRRN4CLQ8ND94 238 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms