RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 ECM29Q5VYK3 1845 aa17.5■□□□□ 0.39
CNKSR1-207ENST00000482227 GCP02774 474 aa17.5■□□□□ 0.39
CNKSR1-207ENST00000482227 INPP5BP32019 993 aa17.5■□□□□ 0.39
CNKSR1-207ENST00000482227 MAP2K2P36507 400 aa17.5■□□□□ 0.39
CNKSR1-207ENST00000482227 ANKRD20A12PQ8NF67 263 aa17.5■□□□□ 0.39
CNKSR1-207ENST00000482227 HINFPQ9BQA5 517 aa17.5■□□□□ 0.39
CNKSR1-207ENST00000482227 AATFQ9NY61 560 aaKnown RBP eCLIP17.5■□□□□ 0.39
CNKSR1-207ENST00000482227 ZNF185O15231 689 aa17.49■□□□□ 0.39
CNKSR1-207ENST00000482227 GNGT1P63211 74 aa17.49■□□□□ 0.39
CNKSR1-207ENST00000482227 PRPF38AQ8NAV1 312 aaKnown RBP17.49■□□□□ 0.39
CNKSR1-207ENST00000482227 JAKMIP2Q96AA8 810 aa17.49■□□□□ 0.39
CNKSR1-207ENST00000482227 TRIM14Q14142 442 aa17.49■□□□□ 0.39
CNKSR1-207ENST00000482227 TTC19Q6DKK2 380 aaPredicted RBP17.49■□□□□ 0.39
CNKSR1-207ENST00000482227 POTEDQ86YR6 584 aa17.49■□□□□ 0.39
CNKSR1-207ENST00000482227 CABP5Q9NP86 173 aa17.49■□□□□ 0.39
CNKSR1-207ENST00000482227 SAMM50Q9Y512 469 aa17.49■□□□□ 0.39
CNKSR1-207ENST00000482227 SLC12A7Q9Y666 1083 aa17.49■□□□□ 0.39
CNKSR1-207ENST00000482227 LIFRP42702 1097 aa17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 FNTAP49354 379 aa17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 CCDC122Q5T0U0 273 aa17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 WASF1Q92558 559 aa17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 CWC25Q9NXE8 425 aaPredicted RBP17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 FAM184BQ9ULE4 1060 aa17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 TBC1D2BQ9UPU7 963 aa17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 ADAMTSL3P82987 1691 aa17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 TTC26A0AVF1 554 aa17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 FAM205CA6NFA0 338 aa17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 CKAP4Q07065 602 aaKnown RBP17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 TCP11X2Q5H9J9 407 aa17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 WDR59Q6PJI9 974 aa17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 GBP6Q6ZN66 633 aa17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 STAMQ92783 540 aa17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 SYMPKQ92797 1274 aaKnown RBP17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 RRP36Q96EU6 259 aaKnown RBP17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 ARFGEF2Q9Y6D5 1785 aa17.48■□□□□ 0.39
CNKSR1-207ENST00000482227 SHTN1A0MZ66 631 aa17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 RCCD1A6NED2 376 aa17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 CCDC172P0C7W6 258 aa17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 ADD2P35612 726 aa17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 CMTR1Q8N1G2 835 aaKnown RBP17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 CCDC82Q8N4S0 544 aa17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 CEP131Q9UPN4 1083 aa17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 TACC3Q9Y6A5 838 aa17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 A1BGP04217 495 aa17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 APPP05067 770 aa17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 TTF1Q15361 905 aaPredicted RBP17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 ESCO1Q5FWF5 840 aa17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 HDAC7Q8WUI4 952 aa17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 SHISA4Q96DD7 197 aa17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 LACRTQ9GZZ8 138 aa17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 GNL3LQ9NVN8 582 aaKnown RBP17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 ZSWIM5Q9P217 1185 aa17.47■□□□□ 0.39
CNKSR1-207ENST00000482227 NBPF26B4DH59 902 aa17.46■□□□□ 0.39
CNKSR1-207ENST00000482227 KCNJ18B7U540 433 aa17.46■□□□□ 0.39
CNKSR1-207ENST00000482227 ATP6V1AP38606 617 aa17.46■□□□□ 0.39
CNKSR1-207ENST00000482227 C2orf54Q08AI8 447 aa17.46■□□□□ 0.39
CNKSR1-207ENST00000482227 KCNJ12Q14500 433 aa17.46■□□□□ 0.39
CNKSR1-207ENST00000482227 EZH2Q15910 746 aaKnown RBP17.46■□□□□ 0.39
CNKSR1-207ENST00000482227 NBPF10Q6P3W6 841 aaKnown RBP17.46■□□□□ 0.39
CNKSR1-207ENST00000482227 TTLL7Q6ZT98 887 aa17.46■□□□□ 0.39
CNKSR1-207ENST00000482227 SND1Q7KZF4 910 aaKnown RBP eCLIP17.46■□□□□ 0.39
CNKSR1-207ENST00000482227 NBPF15Q8N660 670 aa17.46■□□□□ 0.39
CNKSR1-207ENST00000482227 OR8K1Q8NGG5 319 aa17.46■□□□□ 0.39
CNKSR1-207ENST00000482227 DNAJC7Q99615 494 aa17.46■□□□□ 0.39
CNKSR1-207ENST00000482227 ZNF142P52746 1687 aaPredicted RBP17.46■□□□□ 0.39
CNKSR1-207ENST00000482227 PHKG2P15735 406 aa17.46■□□□□ 0.38
CNKSR1-207ENST00000482227 RWDD2AQ9UIY3 292 aa17.46■□□□□ 0.38
CNKSR1-207ENST00000482227 CAPN7Q9Y6W3 813 aa17.46■□□□□ 0.38
CNKSR1-207ENST00000482227 MYO5AQ9Y4I1 1855 aaKnown RBP17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 CCDC196A0A1B0GTZ2 297 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 MYO1FO00160 1098 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 IFIT3O14879 490 aaKnown RBP17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 USP8P40818 1118 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 MCAMP43121 646 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 UBXN1Q04323 297 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 EARS2Q5JPH6 523 aaKnown RBP17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 ZNF662Q6ZS27 426 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 ANKRD18AQ8IVF6 992 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 TTC5Q8N0Z6 440 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 ARL8AQ96BM9 186 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 DONSONQ9NYP3 566 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 CEP83Q9Y592 693 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 XDHP47989 1333 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 GOLGA8KD6RF30 607 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 WNT7AO00755 349 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 SKOR1P84550 965 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 SPAG1Q07617 926 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 TTMPQ5BVD1 217 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 RRAGBQ5VZM2 374 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 IRF2BP1Q8IU81 584 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 CAGE1Q8TC20 777 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 BLZF1Q9H2G9 400 aa17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 DMGDHQ9UI17 866 aaKnown RBP17.45■□□□□ 0.38
CNKSR1-207ENST00000482227 CAMTA1Q9Y6Y1 1673 aa17.44■□□□□ 0.38
CNKSR1-207ENST00000482227 NID2Q14112 1375 aa17.44■□□□□ 0.38
CNKSR1-207ENST00000482227 ANKLE2Q86XL3 938 aa17.44■□□□□ 0.38
CNKSR1-207ENST00000482227 CRACR2BQ8N4Y2 399 aaPredicted RBP17.44■□□□□ 0.38
CNKSR1-207ENST00000482227 AIDAQ96BJ3 306 aa17.44■□□□□ 0.38
CNKSR1-207ENST00000482227 DUSP10Q9Y6W6 482 aa17.44■□□□□ 0.38
CNKSR1-207ENST00000482227 EPB41P11171 864 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms