RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 TRAF5O00463 557 aa19.66■□□□□ 0.74
SCAMP3-207ENST00000480219 DHX16O60231 1041 aaKnown RBP19.66■□□□□ 0.74
SCAMP3-207ENST00000480219 PTPRAP18433 802 aa19.66■□□□□ 0.74
SCAMP3-207ENST00000480219 CCDC83Q8IWF9 413 aa19.66■□□□□ 0.74
SCAMP3-207ENST00000480219 ANKRD13AQ8IZ07 590 aa19.66■□□□□ 0.74
SCAMP3-207ENST00000480219 SMARCC2Q8TAQ2 1214 aa19.66■□□□□ 0.74
SCAMP3-207ENST00000480219 ZKSCAN4Q969J2 545 aaPredicted RBP19.66■□□□□ 0.74
SCAMP3-207ENST00000480219 SH2D4AQ9H788 454 aa19.66■□□□□ 0.74
SCAMP3-207ENST00000480219 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.66■□□□□ 0.74
SCAMP3-207ENST00000480219 PALM3A6NDB9 673 aaPredicted RBP19.65■□□□□ 0.74
SCAMP3-207ENST00000480219 CTDNEP1O95476 244 aa19.65■□□□□ 0.74
SCAMP3-207ENST00000480219 PDHBP11177 359 aa19.65■□□□□ 0.74
SCAMP3-207ENST00000480219 CDC27P30260 824 aa19.65■□□□□ 0.74
SCAMP3-207ENST00000480219 STK3Q13188 491 aa19.65■□□□□ 0.74
SCAMP3-207ENST00000480219 VGLL4Q14135 290 aa19.65■□□□□ 0.74
SCAMP3-207ENST00000480219 RTN1Q16799 776 aa19.65■□□□□ 0.74
SCAMP3-207ENST00000480219 ARMC9Q7Z3E5 817 aa19.65■□□□□ 0.74
SCAMP3-207ENST00000480219 NSUN7Q8NE18 718 aaKnown RBP19.65■□□□□ 0.74
SCAMP3-207ENST00000480219 GMCL1Q96IK5 515 aa19.65■□□□□ 0.74
SCAMP3-207ENST00000480219 MYL10Q9BUA6 226 aa19.65■□□□□ 0.74
SCAMP3-207ENST00000480219 KIAA1683Q9H0B3 1180 aa19.65■□□□□ 0.74
SCAMP3-207ENST00000480219 FZD1Q9UP38 647 aa19.65■□□□□ 0.74
SCAMP3-207ENST00000480219 IFNAR1P17181 557 aa19.64■□□□□ 0.73
SCAMP3-207ENST00000480219 SMARCA1P28370 1054 aa19.64■□□□□ 0.73
SCAMP3-207ENST00000480219 KIF5BP33176 963 aa19.64■□□□□ 0.73
SCAMP3-207ENST00000480219 ADD1P35611 737 aaKnown RBP19.64■□□□□ 0.73
SCAMP3-207ENST00000480219 CCT2P78371 535 aaKnown RBP19.64■□□□□ 0.73
SCAMP3-207ENST00000480219 FUT2Q10981 343 aa19.64■□□□□ 0.73
SCAMP3-207ENST00000480219 LRRC47Q8N1G4 583 aaKnown RBP19.64■□□□□ 0.73
SCAMP3-207ENST00000480219 ACER1Q8TDN7 264 aa19.64■□□□□ 0.73
SCAMP3-207ENST00000480219 DCAF4Q8WV16 495 aa19.64■□□□□ 0.73
SCAMP3-207ENST00000480219 NCOA5Q9HCD5 579 aaKnown RBP19.64■□□□□ 0.73
SCAMP3-207ENST00000480219 PICK1Q9NRD5 415 aa19.64■□□□□ 0.73
SCAMP3-207ENST00000480219 MAD2L2Q9UI95 211 aa19.64■□□□□ 0.73
SCAMP3-207ENST00000480219 PASKQ96RG2 1323 aa19.64■□□□□ 0.73
SCAMP3-207ENST00000480219 TRPM7Q96QT4 1865 aa19.63■□□□□ 0.73
SCAMP3-207ENST00000480219 F5H6K3 240 aa19.63■□□□□ 0.73
SCAMP3-207ENST00000480219 RXRAP19793 462 aa19.63■□□□□ 0.73
SCAMP3-207ENST00000480219 DDIT3P35638 169 aa19.63■□□□□ 0.73
SCAMP3-207ENST00000480219 SLC4A3P48751 1232 aa19.63■□□□□ 0.73
SCAMP3-207ENST00000480219 GNAQP50148 359 aa19.63■□□□□ 0.73
SCAMP3-207ENST00000480219 KLRC3Q07444 240 aa19.63■□□□□ 0.73
SCAMP3-207ENST00000480219 ASPRV1Q53RT3 343 aa19.63■□□□□ 0.73
SCAMP3-207ENST00000480219 TMTC3Q6ZXV5 915 aa19.63■□□□□ 0.73
SCAMP3-207ENST00000480219 CTCFLQ8NI51 663 aaPredicted RBP19.63■□□□□ 0.73
SCAMP3-207ENST00000480219 VCPKMTQ9H867 229 aa19.63■□□□□ 0.73
SCAMP3-207ENST00000480219 AS3MTQ9HBK9 375 aa19.63■□□□□ 0.73
SCAMP3-207ENST00000480219 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.63■□□□□ 0.73
SCAMP3-207ENST00000480219 CSADQ9Y600 493 aa19.63■□□□□ 0.73
SCAMP3-207ENST00000480219 STK36Q9NRP7 1315 aa19.62■□□□□ 0.73
SCAMP3-207ENST00000480219 SPDYE5A6NIY4 337 aa19.62■□□□□ 0.73
SCAMP3-207ENST00000480219 ECE1P42892 770 aa19.62■□□□□ 0.73
SCAMP3-207ENST00000480219 FMR1Q06787 632 aaKnown RBP eCLIP19.62■□□□□ 0.73
SCAMP3-207ENST00000480219 ZNF543Q08ER8 600 aa19.62■□□□□ 0.73
SCAMP3-207ENST00000480219 GPATCH4Q5T3I0 446 aaKnown RBP19.62■□□□□ 0.73
SCAMP3-207ENST00000480219 ZNF280CQ8ND82 737 aa19.62■□□□□ 0.73
SCAMP3-207ENST00000480219 RBM46Q8TBY0 533 aaKnown RBP19.62■□□□□ 0.73
SCAMP3-207ENST00000480219 NUP133Q8WUM0 1156 aa19.62■□□□□ 0.73
SCAMP3-207ENST00000480219 C12orf42Q96LP6 360 aa19.62■□□□□ 0.73
SCAMP3-207ENST00000480219 LZTS2Q9BRK4 669 aa19.62■□□□□ 0.73
SCAMP3-207ENST00000480219 CWC22Q9HCG8 908 aaKnown RBP19.62■□□□□ 0.73
SCAMP3-207ENST00000480219 NAP1L2Q9ULW6 460 aaPredicted RBP19.62■□□□□ 0.73
SCAMP3-207ENST00000480219 AFG3L2Q9Y4W6 797 aa19.62■□□□□ 0.73
SCAMP3-207ENST00000480219 CDKL5O76039 1030 aa19.61■□□□□ 0.73
SCAMP3-207ENST00000480219 NDUFB10O96000 172 aa19.61■□□□□ 0.73
SCAMP3-207ENST00000480219 HMGN5P82970 282 aaKnown RBP19.61■□□□□ 0.73
SCAMP3-207ENST00000480219 ATP2B2Q01814 1243 aa19.61■□□□□ 0.73
SCAMP3-207ENST00000480219 PPATQ06203 517 aa19.61■□□□□ 0.73
SCAMP3-207ENST00000480219 PRKG1Q13976 671 aa19.61■□□□□ 0.73
SCAMP3-207ENST00000480219 SH3D19Q5HYK7 790 aa19.61■□□□□ 0.73
SCAMP3-207ENST00000480219 CST9Q5W186 159 aa19.61■□□□□ 0.73
SCAMP3-207ENST00000480219 SLFN13Q68D06 897 aa19.61■□□□□ 0.73
SCAMP3-207ENST00000480219 CPLX2Q6PUV4 134 aaKnown RBP19.61■□□□□ 0.73
SCAMP3-207ENST00000480219 NBPF11Q86T75 865 aa19.61■□□□□ 0.73
SCAMP3-207ENST00000480219 RAB11FIP4Q86YS3 637 aa19.61■□□□□ 0.73
SCAMP3-207ENST00000480219 LPAR1Q92633 364 aa19.61■□□□□ 0.73
SCAMP3-207ENST00000480219 GBA2Q9HCG7 927 aaPredicted RBP19.61■□□□□ 0.73
SCAMP3-207ENST00000480219 GOPCQ9HD26 462 aa19.61■□□□□ 0.73
SCAMP3-207ENST00000480219 DAXXQ9UER7 740 aaPredicted RBP19.61■□□□□ 0.73
SCAMP3-207ENST00000480219 USP17L10C9JJH3 530 aa19.6■□□□□ 0.73
SCAMP3-207ENST00000480219 PLA2G6O60733 806 aa19.6■□□□□ 0.73
SCAMP3-207ENST00000480219 PARP1P09874 1014 aaKnown RBP19.6■□□□□ 0.73
SCAMP3-207ENST00000480219 BACE1P56817 501 aa19.6■□□□□ 0.73
SCAMP3-207ENST00000480219 MOB2Q70IA6 237 aa19.6■□□□□ 0.73
SCAMP3-207ENST00000480219 CCDC84Q86UT8 332 aaPredicted RBP19.6■□□□□ 0.73
SCAMP3-207ENST00000480219 ERO1BQ86YB8 467 aa19.6■□□□□ 0.73
SCAMP3-207ENST00000480219 CCDC144CPQ8IYA2 1237 aa19.6■□□□□ 0.73
SCAMP3-207ENST00000480219 SMC1BQ8NDV3 1235 aa19.6■□□□□ 0.73
SCAMP3-207ENST00000480219 RGS22Q8NE09 1264 aa19.6■□□□□ 0.73
SCAMP3-207ENST00000480219 SPZ1Q9BXG8 430 aa19.6■□□□□ 0.73
SCAMP3-207ENST00000480219 CNTNAP5Q8WYK1 1306 aa19.59■□□□□ 0.73
SCAMP3-207ENST00000480219 PTPDC1A2A3K4 754 aa19.59■□□□□ 0.73
SCAMP3-207ENST00000480219 C19orf81C9J6K1 198 aa19.59■□□□□ 0.73
SCAMP3-207ENST00000480219 CPLX1O14810 134 aa19.59■□□□□ 0.73
SCAMP3-207ENST00000480219 TOMM70O94826 608 aa19.59■□□□□ 0.73
SCAMP3-207ENST00000480219 CELF2O95319 508 aaKnown RBP19.59■□□□□ 0.73
SCAMP3-207ENST00000480219 PLEKHA8P1O95397 391 aa19.59■□□□□ 0.73
SCAMP3-207ENST00000480219 USP14P54578 494 aa19.59■□□□□ 0.73
SCAMP3-207ENST00000480219 KIAA1755Q5JYT7 1200 aa19.59■□□□□ 0.73
SCAMP3-207ENST00000480219 USP17L2Q6R6M4 530 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms