RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 CCAR1Q8IX12 1150 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 MRPL41Q8IXM3 137 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 GALNT11Q8NCW6 608 aa9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 BAHD1Q8TBE0 780 aaPredicted RBP9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 KIFC2Q96AC6 838 aa9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 TRIM47Q96LD4 638 aa9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 DPH2Q9BQC3 489 aaPredicted RBP9.86□□□□□ -0.83
GAPVD1-217ENST00000479511 SHTN1A0MZ66 631 aa9.85□□□□□ -0.83
GAPVD1-217ENST00000479511 ADAM11O75078 769 aa9.85□□□□□ -0.83
GAPVD1-217ENST00000479511 RHBDL3P58872 404 aa9.85□□□□□ -0.83
GAPVD1-217ENST00000479511 STRN3Q13033 797 aa9.85□□□□□ -0.83
GAPVD1-217ENST00000479511 NKG7Q16617 165 aa9.85□□□□□ -0.83
GAPVD1-217ENST00000479511 TRIM61Q5EBN2 209 aa9.85□□□□□ -0.83
GAPVD1-217ENST00000479511 UBE3DQ7Z6J8 389 aa9.85□□□□□ -0.83
GAPVD1-217ENST00000479511 MORC4Q8TE76 937 aa9.85□□□□□ -0.83
GAPVD1-217ENST00000479511 NANOS1Q8WY41 292 aaKnown RBP9.85□□□□□ -0.83
GAPVD1-217ENST00000479511 ZNF512BQ96KM6 892 aaPredicted RBP9.85□□□□□ -0.83
GAPVD1-217ENST00000479511 SFMBT1Q9UHJ3 866 aa9.85□□□□□ -0.83
GAPVD1-217ENST00000479511 PHLDB1Q86UU1 1377 aa9.85□□□□□ -0.83
GAPVD1-217ENST00000479511 RASGRP1O95267 797 aa9.84□□□□□ -0.83
GAPVD1-217ENST00000479511 SLFN14P0C7P3 912 aa9.84□□□□□ -0.83
GAPVD1-217ENST00000479511 SNRPBP14678 240 aaKnown RBP9.84□□□□□ -0.83
GAPVD1-217ENST00000479511 MAP7Q14244 749 aa9.84□□□□□ -0.83
GAPVD1-217ENST00000479511 SUZ12Q15022 739 aaKnown RBP9.84□□□□□ -0.83
GAPVD1-217ENST00000479511 SETDB1Q15047 1291 aa9.84□□□□□ -0.83
GAPVD1-217ENST00000479511 PPP2R5AQ15172 486 aa9.84□□□□□ -0.83
GAPVD1-217ENST00000479511 MAP9Q49MG5 647 aa9.84□□□□□ -0.83
GAPVD1-217ENST00000479511 SLC6A19Q695T7 634 aa9.84□□□□□ -0.83
GAPVD1-217ENST00000479511 PKN3Q6P5Z2 889 aa9.84□□□□□ -0.83
GAPVD1-217ENST00000479511 C8orf86Q6ZUL3 223 aa9.84□□□□□ -0.83
GAPVD1-217ENST00000479511 HID1Q8IV36 788 aa9.84□□□□□ -0.83
GAPVD1-217ENST00000479511 MTFR1LQ9H019 292 aa9.84□□□□□ -0.83
GAPVD1-217ENST00000479511 SENP2Q9HC62 589 aa9.84□□□□□ -0.83
GAPVD1-217ENST00000479511 PICK1Q9NRD5 415 aa9.84□□□□□ -0.83
GAPVD1-217ENST00000479511 PPP1R9AQ9ULJ8 1098 aa9.84□□□□□ -0.83
GAPVD1-217ENST00000479511 FANCGO15287 622 aa9.83□□□□□ -0.84
GAPVD1-217ENST00000479511 TMPRSS2O15393 492 aa9.83□□□□□ -0.84
GAPVD1-217ENST00000479511 SCGB1D2O95969 90 aa9.83□□□□□ -0.84
GAPVD1-217ENST00000479511 GNALP38405 381 aa9.83□□□□□ -0.84
GAPVD1-217ENST00000479511 RAB27AP51159 221 aa9.83□□□□□ -0.84
GAPVD1-217ENST00000479511 MTMR1Q13613 665 aa9.83□□□□□ -0.84
GAPVD1-217ENST00000479511 ZNF460Q14592 562 aa9.83□□□□□ -0.84
GAPVD1-217ENST00000479511 BRAPQ7Z569 592 aa9.83□□□□□ -0.84
GAPVD1-217ENST00000479511 FGD2Q7Z6J4 655 aa9.83□□□□□ -0.84
GAPVD1-217ENST00000479511 CCDC74BQ96LY2 380 aa9.83□□□□□ -0.84
GAPVD1-217ENST00000479511 SLC52A2Q9HAB3 445 aa9.83□□□□□ -0.84
GAPVD1-217ENST00000479511 KCNK4Q9NYG8 393 aa9.83□□□□□ -0.84
GAPVD1-217ENST00000479511 NDOR1Q9UHB4 597 aa9.83□□□□□ -0.84
GAPVD1-217ENST00000479511 GDF2Q9UK05 429 aaPredicted RBP9.83□□□□□ -0.84
GAPVD1-217ENST00000479511 ZNF451Q9Y4E5 1061 aa9.83□□□□□ -0.84
GAPVD1-217ENST00000479511 TNPO3Q9Y5L0 923 aaKnown RBP9.83□□□□□ -0.84
GAPVD1-217ENST00000479511 CLEC3AO75596 197 aa9.82□□□□□ -0.84
GAPVD1-217ENST00000479511 ALAS2P22557 587 aa9.82□□□□□ -0.84
GAPVD1-217ENST00000479511 GBP1P32455 592 aa9.82□□□□□ -0.84
GAPVD1-217ENST00000479511 HNRNPUQ00839 825 aaKnown RBP eCLIP9.82□□□□□ -0.84
GAPVD1-217ENST00000479511 ID3Q02535 119 aa9.82□□□□□ -0.84
GAPVD1-217ENST00000479511 SEPT7Q16181 437 aaKnown RBP9.82□□□□□ -0.84
GAPVD1-217ENST00000479511 WFDC8Q8IUA0 241 aa9.82□□□□□ -0.84
GAPVD1-217ENST00000479511 PPM1KQ8N3J5 372 aa9.82□□□□□ -0.84
GAPVD1-217ENST00000479511 KLHL23Q8NBE8 558 aa9.82□□□□□ -0.84
GAPVD1-217ENST00000479511 ZNF526Q8TF50 670 aaPredicted RBP9.82□□□□□ -0.84
GAPVD1-217ENST00000479511 RELTQ969Z4 430 aa9.82□□□□□ -0.84
GAPVD1-217ENST00000479511 MRGPRX3Q96LB0 322 aa9.82□□□□□ -0.84
GAPVD1-217ENST00000479511 CCDC8Q9H0W5 538 aaPredicted RBP9.82□□□□□ -0.84
GAPVD1-217ENST00000479511 DISC1Q9NRI5 854 aa9.82□□□□□ -0.84
GAPVD1-217ENST00000479511 GMPR2Q9P2T1 348 aaKnown RBP9.82□□□□□ -0.84
GAPVD1-217ENST00000479511 BLACEA4D250 179 aa9.81□□□□□ -0.84
GAPVD1-217ENST00000479511 POU3F2P20265 443 aaPredicted RBP9.81□□□□□ -0.84
GAPVD1-217ENST00000479511 FOXD4L6Q3SYB3 417 aaPredicted RBP9.81□□□□□ -0.84
GAPVD1-217ENST00000479511 FOXD4L3Q6VB84 417 aaPredicted RBP9.81□□□□□ -0.84
GAPVD1-217ENST00000479511 CCDC144CPQ8IYA2 1237 aa9.81□□□□□ -0.84
GAPVD1-217ENST00000479511 GSTCDQ8NEC7 633 aa9.81□□□□□ -0.84
GAPVD1-217ENST00000479511 WDR66Q8TBY9 1149 aa9.81□□□□□ -0.84
GAPVD1-217ENST00000479511 TRIM8Q9BZR9 551 aa9.81□□□□□ -0.84
GAPVD1-217ENST00000479511 SLC5A4Q9NY91 659 aa9.81□□□□□ -0.84
GAPVD1-217ENST00000479511 CRIM1Q9NZV1 1036 aa9.81□□□□□ -0.84
GAPVD1-217ENST00000479511 KIF3BO15066 747 aa9.8□□□□□ -0.84
GAPVD1-217ENST00000479511 AKAP10O43572 662 aa9.8□□□□□ -0.84
GAPVD1-217ENST00000479511 DLX3O60479 287 aa9.8□□□□□ -0.84
GAPVD1-217ENST00000479511 NEK2P51955 445 aa9.8□□□□□ -0.84
GAPVD1-217ENST00000479511 SLBPQ14493 270 aaKnown RBP eCLIP9.8□□□□□ -0.84
GAPVD1-217ENST00000479511 STAT4Q14765 748 aa9.8□□□□□ -0.84
GAPVD1-217ENST00000479511 NECAB2Q7Z6G3 386 aa9.8□□□□□ -0.84
GAPVD1-217ENST00000479511 ADAT2Q7Z6V5 191 aaKnown RBP9.8□□□□□ -0.84
GAPVD1-217ENST00000479511 BVESQ8NE79 360 aa9.8□□□□□ -0.84
GAPVD1-217ENST00000479511 ZNF507Q8TCN5 953 aa9.8□□□□□ -0.84
GAPVD1-217ENST00000479511 SMARCC1Q92922 1105 aaPredicted RBP9.8□□□□□ -0.84
GAPVD1-217ENST00000479511 SCLYQ96I15 445 aa9.8□□□□□ -0.84
GAPVD1-217ENST00000479511 SMAD5Q99717 465 aaKnown RBP9.8□□□□□ -0.84
GAPVD1-217ENST00000479511 RAD18Q9NS91 495 aa9.8□□□□□ -0.84
GAPVD1-217ENST00000479511 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 SPDYE3A6NKU9 549 aa9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 C11orf95C9JLR9 678 aaPredicted RBP9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 SHOXO15266 292 aa9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 GPR39O43194 453 aa9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 NEFMP07197 916 aa9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 CPEP16870 476 aa9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 MAP2K3P46734 347 aa9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 NEK4P51957 841 aa9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 PRAMEF13Q5VWM6 474 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms