RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 PRPHP41219 470 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 NNTQ13423 1086 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 TUBB8Q3ZCM7 444 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 NAA16Q6N069 864 aaPredicted RBP4.74□□□□□ -1.65
VPS50-210ENST00000471188 MMS19Q96T76 1030 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 ZCWPW1Q9H0M4 648 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 TMX4Q9H1E5 349 aaPredicted RBP4.74□□□□□ -1.65
VPS50-210ENST00000471188 HSD3B7Q9H2F3 369 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 JADE2Q9NQC1 790 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 PICK1Q9NRD5 415 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 CHCHD3Q9NX63 227 aaKnown RBP4.74□□□□□ -1.65
VPS50-210ENST00000471188 TTF2Q9UNY4 1162 aaKnown RBP4.74□□□□□ -1.65
VPS50-210ENST00000471188 ADGRL3Q9HAR2 1447 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 PIK3C2BO00750 1634 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 BACH1O14867 736 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 KRT14P02533 472 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 RAB27AP51159 221 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 APBA1Q02410 837 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 RBL2Q08999 1139 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 FLIIQ13045 1269 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 ZNF827Q17R98 1081 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 SMYD5Q6GMV2 418 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 BZW1Q7L1Q6 419 aaKnown RBP4.73□□□□□ -1.65
VPS50-210ENST00000471188 NLRP14Q86W24 1093 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 FAM228AQ86W67 206 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 B4GALNT2Q8NHY0 566 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 MAP4K1Q92918 833 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 AIDAQ96BJ3 306 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 HOOK2Q96ED9 719 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 RNPC3Q96LT9 517 aaKnown RBP4.73□□□□□ -1.65
VPS50-210ENST00000471188 TSC22D3Q99576 134 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 EPN3Q9H201 632 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 BOLA2Q9H3K6 86 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 SUDS3Q9H7L9 328 aaPredicted RBP4.73□□□□□ -1.65
VPS50-210ENST00000471188 ACTR5Q9H9F9 607 aaPredicted RBP4.73□□□□□ -1.65
VPS50-210ENST00000471188 GOPCQ9HD26 462 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 ECHDC1Q9NTX5 307 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 FAM184BQ9ULE4 1060 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 L3MBTL1Q9Y468 752 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 SAR1BQ9Y6B6 198 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 A0A1W2PQ27 194 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 A0A1W2PQ64 194 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 A0A1W2PQD8 194 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 TEX33O43247 280 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 ECEL1O95672 775 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 SETSIPP0DME0 302 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 SLC7A5Q01650 507 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 CKAP4Q07065 602 aaKnown RBP4.73□□□□□ -1.65
VPS50-210ENST00000471188 C2orf54Q08AI8 447 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 FAM69CQ0P6D2 419 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 LAPTM4AQ15012 233 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 RRS1Q15050 365 aaKnown RBP4.73□□□□□ -1.65
VPS50-210ENST00000471188 FILIP1LQ4L180 1135 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 ODF2Q5BJF6 829 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 HHATQ5VTY9 493 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 ATL3Q6DD88 541 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 CCNI2Q6ZMN8 369 aaPredicted RBP4.73□□□□□ -1.65
VPS50-210ENST00000471188 AACSQ86V21 672 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 LINC00301Q8NCQ3 95 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 TRIM58Q8NG06 486 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 MYCBPAPQ8TBZ2 947 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 CCDC47Q96A33 483 aaKnown RBP4.73□□□□□ -1.65
VPS50-210ENST00000471188 EVI5LQ96CN4 794 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 NUP88Q99567 741 aaPredicted RBP4.73□□□□□ -1.65
VPS50-210ENST00000471188 SH3GL2Q99962 352 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 C19orf44Q9H6X5 657 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 NOD2Q9HC29 1040 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 SLC39A2Q9NP94 309 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 SYCP2Q9BX26 1530 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 A0A0D9SFI3 127 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 A0A0G2JS52 829 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 ANP32DO95626 131 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 CASP14P31944 242 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 STX17P56962 302 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 IFFO1Q0D2I5 559 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 TEFQ10587 303 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 KRT32Q14532 448 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 PLCB4Q15147 1175 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 TBC1D25Q3MII6 688 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 CFAP58Q5T655 872 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 SULT6B1Q6IMI4 303 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 TLDC1Q6P9B6 456 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 EHBP1Q8NDI1 1231 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 NSUN7Q8NE18 718 aaKnown RBP4.73□□□□□ -1.65
VPS50-210ENST00000471188 ZNF516Q92618 1163 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 C8orf76Q96K31 380 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 CCDC8Q9H0W5 538 aaPredicted RBP4.73□□□□□ -1.65
VPS50-210ENST00000471188 PAPOLBQ9NRJ5 636 aaKnown RBP4.73□□□□□ -1.65
VPS50-210ENST00000471188 SAMSN1Q9NSI8 373 aaKnown RBP4.73□□□□□ -1.65
VPS50-210ENST00000471188 TRIM10Q9UDY6 481 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 PCDHA5Q9Y5H7 936 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 IQGAP3Q86VI3 1631 aa4.73□□□□□ -1.65
VPS50-210ENST00000471188 SPHKAPQ2M3C7 1700 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 HIP1O00291 1037 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 DIAPH2O60879 1101 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 GNAT1P11488 350 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 NR1D1P20393 614 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 AMPHP49418 695 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 PAPOLAP51003 745 aaKnown RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 PDE4BQ07343 736 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 266 ms