RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 CCDC96Q2M329 555 aa11.34□□□□□ -0.59
CCM2-204ENST00000470837 ASPRV1Q53RT3 343 aa11.34□□□□□ -0.59
CCM2-204ENST00000470837 ARMC9Q7Z3E5 817 aa11.34□□□□□ -0.59
CCM2-204ENST00000470837 LDHDQ86WU2 507 aa11.34□□□□□ -0.59
CCM2-204ENST00000470837 NSUN7Q8NE18 718 aaKnown RBP11.34□□□□□ -0.59
CCM2-204ENST00000470837 SLC26A6Q9BXS9 759 aa11.34□□□□□ -0.59
CCM2-204ENST00000470837 CSADQ9Y600 493 aa11.34□□□□□ -0.59
CCM2-204ENST00000470837 WDR33Q9C0J8 1336 aaKnown RBP11.34□□□□□ -0.59
CCM2-204ENST00000470837 NID2Q14112 1375 aa11.33□□□□□ -0.6
CCM2-204ENST00000470837 USP17L5A8MUK1 530 aa11.33□□□□□ -0.6
CCM2-204ENST00000470837 PHF20L1A8MW92 1017 aa11.33□□□□□ -0.6
CCM2-204ENST00000470837 JAK2O60674 1132 aa11.33□□□□□ -0.6
CCM2-204ENST00000470837 IFNAR1P17181 557 aa11.33□□□□□ -0.6
CCM2-204ENST00000470837 CDC27P30260 824 aa11.33□□□□□ -0.6
CCM2-204ENST00000470837 SLC1A4P43007 532 aa11.33□□□□□ -0.6
CCM2-204ENST00000470837 NOVP48745 357 aa11.33□□□□□ -0.6
CCM2-204ENST00000470837 IKQ13123 557 aaPredicted RBP11.33□□□□□ -0.6
CCM2-204ENST00000470837 PRKG1Q13976 671 aa11.33□□□□□ -0.6
CCM2-204ENST00000470837 GRM4Q14833 912 aa11.33□□□□□ -0.6
CCM2-204ENST00000470837 GPATCH4Q5T3I0 446 aaKnown RBP11.33□□□□□ -0.6
CCM2-204ENST00000470837 CLEC10AQ8IUN9 316 aa11.33□□□□□ -0.6
CCM2-204ENST00000470837 SCYL3Q8IZE3 742 aa11.33□□□□□ -0.6
CCM2-204ENST00000470837 CCDC82Q8N4S0 544 aa11.33□□□□□ -0.6
CCM2-204ENST00000470837 DCAF4Q8WV16 495 aa11.33□□□□□ -0.6
CCM2-204ENST00000470837 MKL1Q969V6 931 aa11.33□□□□□ -0.6
CCM2-204ENST00000470837 CDCA5Q96FF9 252 aa11.33□□□□□ -0.6
CCM2-204ENST00000470837 SEC63Q9UGP8 760 aaKnown RBP11.33□□□□□ -0.6
CCM2-204ENST00000470837 CDK5RAP2Q96SN8 1893 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 VPS37CA5D8V6 355 aaPredicted RBP11.32□□□□□ -0.6
CCM2-204ENST00000470837 POTECB2RU33 542 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 STX6O43752 255 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 DEXIO95424 95 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 FMNL1O95466 1100 aaPredicted RBP11.32□□□□□ -0.6
CCM2-204ENST00000470837 INPP5BP32019 993 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 MAP3K9P80192 1104 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 ST3GAL1Q11201 340 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 SLFN13Q68D06 897 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 TMTC3Q6ZXV5 915 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 GMCL1P1Q8NEA9 526 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 SMARCC2Q8TAQ2 1214 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 PHKBQ93100 1093 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 KLRG1Q96E93 195 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 C8orf76Q96K31 380 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 RNF26Q9BY78 433 aaPredicted RBP11.32□□□□□ -0.6
CCM2-204ENST00000470837 GLIS2Q9BZE0 524 aaPredicted RBP11.32□□□□□ -0.6
CCM2-204ENST00000470837 ZNF112Q9UJU3 913 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 ATP6V1DQ9Y5K8 247 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 STK36Q9NRP7 1315 aa11.32□□□□□ -0.6
CCM2-204ENST00000470837 KLRF2D3W0D1 207 aa11.31□□□□□ -0.6
CCM2-204ENST00000470837 F5H6K3 240 aa11.31□□□□□ -0.6
CCM2-204ENST00000470837 PPFIA3O75145 1194 aa11.31□□□□□ -0.6
CCM2-204ENST00000470837 CTDNEP1O95476 244 aa11.31□□□□□ -0.6
CCM2-204ENST00000470837 PDHBP11177 359 aa11.31□□□□□ -0.6
CCM2-204ENST00000470837 SYT1P21579 422 aa11.31□□□□□ -0.6
CCM2-204ENST00000470837 GUCY1A2P33402 732 aa11.31□□□□□ -0.6
CCM2-204ENST00000470837 USP14P54578 494 aa11.31□□□□□ -0.6
CCM2-204ENST00000470837 KLRC3Q07444 240 aa11.31□□□□□ -0.6
CCM2-204ENST00000470837 GNL2Q13823 731 aaKnown RBP11.31□□□□□ -0.6
CCM2-204ENST00000470837 RRP1BQ14684 758 aaKnown RBP11.31□□□□□ -0.6
CCM2-204ENST00000470837 MAP1SQ66K74 1059 aaPredicted RBP11.31□□□□□ -0.6
CCM2-204ENST00000470837 USP17L2Q6R6M4 530 aa11.31□□□□□ -0.6
CCM2-204ENST00000470837 RRP36Q96EU6 259 aaKnown RBP11.31□□□□□ -0.6
CCM2-204ENST00000470837 ALG1Q9BT22 464 aa11.31□□□□□ -0.6
CCM2-204ENST00000470837 ZNF408Q9H9D4 720 aa11.31□□□□□ -0.6
CCM2-204ENST00000470837 GPBP1L1Q9HC44 474 aaPredicted RBP11.31□□□□□ -0.6
CCM2-204ENST00000470837 GPCPD1Q9NPB8 672 aa11.31□□□□□ -0.6
CCM2-204ENST00000470837 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.31□□□□□ -0.6
CCM2-204ENST00000470837 MAD2L2Q9UI95 211 aa11.31□□□□□ -0.6
CCM2-204ENST00000470837 TMX2Q9Y320 296 aa11.31□□□□□ -0.6
CCM2-204ENST00000470837 FRMPD2Q68DX3 1309 aaPredicted RBP11.31□□□□□ -0.6
CCM2-204ENST00000470837 SCN4AP35499 1836 aa11.3□□□□□ -0.6
CCM2-204ENST00000470837 WDR90Q96KV7 1748 aa11.3□□□□□ -0.6
CCM2-204ENST00000470837 PALM3A6NDB9 673 aaPredicted RBP11.3□□□□□ -0.6
CCM2-204ENST00000470837 USP17L10C9JJH3 530 aa11.3□□□□□ -0.6
CCM2-204ENST00000470837 PRPF3O43395 683 aaKnown RBP11.3□□□□□ -0.6
CCM2-204ENST00000470837 USP2O75604 605 aaPredicted RBP11.3□□□□□ -0.6
CCM2-204ENST00000470837 PLEKHA8P1O95397 391 aa11.3□□□□□ -0.6
CCM2-204ENST00000470837 GOLGA8HP0CJ92 632 aa11.3□□□□□ -0.6
CCM2-204ENST00000470837 BMP3P12645 472 aa11.3□□□□□ -0.6
CCM2-204ENST00000470837 SMARCA1P28370 1054 aa11.3□□□□□ -0.6
CCM2-204ENST00000470837 ZNF543Q08ER8 600 aa11.3□□□□□ -0.6
CCM2-204ENST00000470837 SAFBQ15424 915 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCM2-204ENST00000470837 ZYXQ15942 572 aaKnown RBP11.3□□□□□ -0.6
CCM2-204ENST00000470837 SHROOM1Q2M3G4 852 aaPredicted RBP11.3□□□□□ -0.6
CCM2-204ENST00000470837 NOL9Q5SY16 702 aaKnown RBP11.3□□□□□ -0.6
CCM2-204ENST00000470837 ANKRD13AQ8IZ07 590 aa11.3□□□□□ -0.6
CCM2-204ENST00000470837 CMTR1Q8N1G2 835 aaKnown RBP11.3□□□□□ -0.6
CCM2-204ENST00000470837 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCM2-204ENST00000470837 LPAR1Q92633 364 aa11.3□□□□□ -0.6
CCM2-204ENST00000470837 ZKSCAN4Q969J2 545 aaPredicted RBP11.3□□□□□ -0.6
CCM2-204ENST00000470837 GMCL1Q96IK5 515 aa11.3□□□□□ -0.6
CCM2-204ENST00000470837 VCPKMTQ9H867 229 aa11.3□□□□□ -0.6
CCM2-204ENST00000470837 BRMS1Q9HCU9 246 aa11.3□□□□□ -0.6
CCM2-204ENST00000470837 NMRK2Q9NPI5 230 aa11.3□□□□□ -0.6
CCM2-204ENST00000470837 FAM217BQ9NTX9 383 aaPredicted RBP11.3□□□□□ -0.6
CCM2-204ENST00000470837 V9GY48 417 aaPredicted RBP11.3□□□□□ -0.6
CCM2-204ENST00000470837 NDUFB10O96000 172 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 SNHG28P0DPA3 235 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 PTPRAP18433 802 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 DDIT3P35638 169 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms