RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 WTAPQ15007 396 aa13.22□□□□□ -0.29
MSH5-214ENST00000468602 TMEM67Q5HYA8 995 aa13.22□□□□□ -0.29
MSH5-214ENST00000468602 IFIT1BQ5T764 474 aaKnown RBP13.22□□□□□ -0.29
MSH5-214ENST00000468602 SPRYD7Q5W111 196 aa13.22□□□□□ -0.29
MSH5-214ENST00000468602 REM2Q8IYK8 340 aaPredicted RBP13.22□□□□□ -0.29
MSH5-214ENST00000468602 SNX21Q969T3 373 aa13.22□□□□□ -0.29
MSH5-214ENST00000468602 WNK4Q96J92 1243 aa13.22□□□□□ -0.29
MSH5-214ENST00000468602 CLMNQ96JQ2 1002 aa13.22□□□□□ -0.29
MSH5-214ENST00000468602 VCPKMTQ9H867 229 aa13.22□□□□□ -0.29
MSH5-214ENST00000468602 ZCCHC17Q9NP64 241 aaKnown RBP13.22□□□□□ -0.29
MSH5-214ENST00000468602 PDRG1Q9NUG6 133 aa13.22□□□□□ -0.29
MSH5-214ENST00000468602 ZHX2Q9Y6X8 837 aa13.22□□□□□ -0.29
MSH5-214ENST00000468602 IRF6O14896 467 aa13.21□□□□□ -0.29
MSH5-214ENST00000468602 CALM1P0DP23 149 aa13.21□□□□□ -0.29
MSH5-214ENST00000468602 CALM2P0DP24 149 aa13.21□□□□□ -0.29
MSH5-214ENST00000468602 CALM3P0DP25 149 aa13.21□□□□□ -0.29
MSH5-214ENST00000468602 HOXA7P31268 230 aaPredicted RBP13.21□□□□□ -0.29
MSH5-214ENST00000468602 GJA5P36382 358 aa13.21□□□□□ -0.29
MSH5-214ENST00000468602 NEK4P51957 841 aa13.21□□□□□ -0.29
MSH5-214ENST00000468602 MOGSQ13724 837 aa13.21□□□□□ -0.29
MSH5-214ENST00000468602 TTLL12Q14166 644 aaPredicted RBP13.21□□□□□ -0.29
MSH5-214ENST00000468602 RAB3GAP1Q15042 981 aa13.21□□□□□ -0.29
MSH5-214ENST00000468602 RASAL3Q86YV0 1011 aa13.21□□□□□ -0.29
MSH5-214ENST00000468602 STK11IPQ8N1F8 1099 aa13.21□□□□□ -0.29
MSH5-214ENST00000468602 OPTNQ96CV9 577 aa13.21□□□□□ -0.29
MSH5-214ENST00000468602 MS4A4AQ96JQ5 239 aa13.21□□□□□ -0.29
MSH5-214ENST00000468602 UPF3BQ9BZI7 483 aaKnown RBP13.21□□□□□ -0.29
MSH5-214ENST00000468602 ZNF408Q9H9D4 720 aa13.21□□□□□ -0.29
MSH5-214ENST00000468602 CLIP2Q9UDT6 1046 aa13.21□□□□□ -0.29
MSH5-214ENST00000468602 THSD7BQ9C0I4 1608 aa13.21□□□□□ -0.3
MSH5-214ENST00000468602 ST18O60284 1047 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 HSPA1AP0DMV8 641 aaKnown RBP13.2□□□□□ -0.3
MSH5-214ENST00000468602 HSPA1BP0DMV9 641 aaKnown RBP13.2□□□□□ -0.3
MSH5-214ENST00000468602 GTF2A2P52657 109 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 HTRA3P83110 453 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 SPP2Q13103 211 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 SNAPC2Q13487 334 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 PRKG1Q13976 671 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 APOA5Q6Q788 366 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 USP17L2Q6R6M4 530 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 BTNL9Q6UXG8 535 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 Q6ZUG5 572 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 PNMA1Q8ND90 353 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 ACER1Q8TDN7 264 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 DCAF4Q8WV16 495 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 KAT14Q9H8E8 782 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 ELP3Q9H9T3 547 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 GOPCQ9HD26 462 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 EMILIN3Q9NT22 766 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 STX8Q9UNK0 236 aa13.2□□□□□ -0.3
MSH5-214ENST00000468602 MYPNQ86TC9 1320 aa13.19□□□□□ -0.3
MSH5-214ENST00000468602 F5H6K3 240 aa13.19□□□□□ -0.3
MSH5-214ENST00000468602 WDR46O15213 610 aaKnown RBP13.19□□□□□ -0.3
MSH5-214ENST00000468602 PDHBP11177 359 aa13.19□□□□□ -0.3
MSH5-214ENST00000468602 CPA1P15085 419 aa13.19□□□□□ -0.3
MSH5-214ENST00000468602 ECE1P42892 770 aa13.19□□□□□ -0.3
MSH5-214ENST00000468602 AK2P54819 239 aa13.19□□□□□ -0.3
MSH5-214ENST00000468602 KLRC3Q07444 240 aa13.19□□□□□ -0.3
MSH5-214ENST00000468602 GPATCH4Q5T3I0 446 aaKnown RBP13.19□□□□□ -0.3
MSH5-214ENST00000468602 LBX2Q6XYB7 198 aa13.19□□□□□ -0.3
MSH5-214ENST00000468602 FASTKD5Q7L8L6 764 aaKnown RBP13.19□□□□□ -0.3
MSH5-214ENST00000468602 CHST3Q7LGC8 479 aa13.19□□□□□ -0.3
MSH5-214ENST00000468602 CHMP4CQ96CF2 233 aa13.19□□□□□ -0.3
MSH5-214ENST00000468602 ZSCAN31Q96LW9 406 aaPredicted RBP13.19□□□□□ -0.3
MSH5-214ENST00000468602 ZKSCAN3Q9BRR0 538 aa13.19□□□□□ -0.3
MSH5-214ENST00000468602 BRPF3Q9ULD4 1205 aa13.19□□□□□ -0.3
MSH5-214ENST00000468602 RLFQ13129 1914 aa13.18□□□□□ -0.3
MSH5-214ENST00000468602 PALM3A6NDB9 673 aaPredicted RBP13.18□□□□□ -0.3
MSH5-214ENST00000468602 MANSC4A6NHS7 340 aaPredicted RBP13.18□□□□□ -0.3
MSH5-214ENST00000468602 CETPP11597 493 aa13.18□□□□□ -0.3
MSH5-214ENST00000468602 PDIA3P30101 505 aaKnown RBP13.18□□□□□ -0.3
MSH5-214ENST00000468602 TM4SF4P48230 202 aa13.18□□□□□ -0.3
MSH5-214ENST00000468602 NOGQ13253 232 aa13.18□□□□□ -0.3
MSH5-214ENST00000468602 GRM4Q14833 912 aa13.18□□□□□ -0.3
MSH5-214ENST00000468602 DEFB115Q30KQ5 88 aa13.18□□□□□ -0.3
MSH5-214ENST00000468602 ASPRV1Q53RT3 343 aa13.18□□□□□ -0.3
MSH5-214ENST00000468602 CATIPQ7Z7H3 387 aa13.18□□□□□ -0.3
MSH5-214ENST00000468602 ZNF654Q8IZM8 581 aa13.18□□□□□ -0.3
MSH5-214ENST00000468602 BRF1Q92994 677 aa13.18□□□□□ -0.3
MSH5-214ENST00000468602 LZTS2Q9BRK4 669 aa13.18□□□□□ -0.3
MSH5-214ENST00000468602 SENP2Q9HC62 589 aa13.18□□□□□ -0.3
MSH5-214ENST00000468602 SH2B1Q9NRF2 756 aaPredicted RBP13.18□□□□□ -0.3
MSH5-214ENST00000468602 LIMCH1Q9UPQ0 1083 aa13.18□□□□□ -0.3
MSH5-214ENST00000468602 HPS5Q9UPZ3 1129 aa13.18□□□□□ -0.3
MSH5-214ENST00000468602 SLC12A7Q9Y666 1083 aa13.18□□□□□ -0.3
MSH5-214ENST00000468602 PARP14Q460N5 1801 aa13.18□□□□□ -0.3
MSH5-214ENST00000468602 CCDC196A0A1B0GTZ2 297 aa13.17□□□□□ -0.3
MSH5-214ENST00000468602 CCDC69A6NI79 296 aa13.17□□□□□ -0.3
MSH5-214ENST00000468602 PFKFB2O60825 505 aa13.17□□□□□ -0.3
MSH5-214ENST00000468602 NDUFB10O96000 172 aa13.17□□□□□ -0.3
MSH5-214ENST00000468602 FDX1P10109 184 aa13.17□□□□□ -0.3
MSH5-214ENST00000468602 MAP2K2P36507 400 aa13.17□□□□□ -0.3
MSH5-214ENST00000468602 ZNF157P51786 506 aaPredicted RBP13.17□□□□□ -0.3
MSH5-214ENST00000468602 ZNF543Q08ER8 600 aa13.17□□□□□ -0.3
MSH5-214ENST00000468602 MTMR2Q13614 643 aa13.17□□□□□ -0.3
MSH5-214ENST00000468602 ANKRD23Q86SG2 305 aa13.17□□□□□ -0.3
MSH5-214ENST00000468602 CLEC10AQ8IUN9 316 aa13.17□□□□□ -0.3
MSH5-214ENST00000468602 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
MSH5-214ENST00000468602 OTUD5Q96G74 571 aa13.17□□□□□ -0.3
MSH5-214ENST00000468602 CFHR5Q9BXR6 569 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms