RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 RNF214Q8ND24 703 aa5.18□□□□□ -1.58
GPNMB-205ENST00000463011 UBASH3BQ8TF42 649 aa5.18□□□□□ -1.58
GPNMB-205ENST00000463011 XAGE3Q8WTP9 111 aa5.18□□□□□ -1.58
GPNMB-205ENST00000463011 LEO1Q8WVC0 666 aaPredicted RBP5.18□□□□□ -1.58
GPNMB-205ENST00000463011 DDX1Q92499 740 aaKnown RBP5.18□□□□□ -1.58
GPNMB-205ENST00000463011 OSBP2Q969R2 916 aa5.18□□□□□ -1.58
GPNMB-205ENST00000463011 FANCD2OSQ96PS1 177 aa5.18□□□□□ -1.58
GPNMB-205ENST00000463011 KLHL25Q9H0H3 589 aa5.18□□□□□ -1.58
GPNMB-205ENST00000463011 CRIM1Q9NZV1 1036 aa5.18□□□□□ -1.58
GPNMB-205ENST00000463011 MAGEC2Q9UBF1 373 aaPredicted RBP5.18□□□□□ -1.58
GPNMB-205ENST00000463011 ZNF451Q9Y4E5 1061 aa5.18□□□□□ -1.58
GPNMB-205ENST00000463011 DNAJC25-GNG10A0A024R161 153 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 CCDC194A0A1B0GVG4 234 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 DLL1O00548 723 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 NOP56O00567 594 aaKnown RBP5.17□□□□□ -1.58
GPNMB-205ENST00000463011 TBX1O43435 398 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 RNGTTO60942 597 aaKnown RBP5.17□□□□□ -1.58
GPNMB-205ENST00000463011 DEAF1O75398 565 aaPredicted RBP5.17□□□□□ -1.58
GPNMB-205ENST00000463011 ALDH1L1O75891 902 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 DNAJC8O75937 253 aaPredicted RBP5.17□□□□□ -1.58
GPNMB-205ENST00000463011 FGFR1P11362 822 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 PMLP29590 882 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 SUMO1P63165 101 aaKnown RBP5.17□□□□□ -1.58
GPNMB-205ENST00000463011 INSM1Q01101 510 aaPredicted RBP5.17□□□□□ -1.58
GPNMB-205ENST00000463011 SLBPQ14493 270 aaKnown RBP eCLIP5.17□□□□□ -1.58
GPNMB-205ENST00000463011 TTLL4Q14679 1199 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 RNFT1Q5M7Z0 435 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 PRAMEF13Q5VWM6 474 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 CHSY3Q70JA7 882 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 AFAP1L2Q8N4X5 818 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 ZNF513Q8N8E2 541 aaPredicted RBP5.17□□□□□ -1.58
GPNMB-205ENST00000463011 SLC7A14Q8TBB6 771 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 EDARADDQ8WWZ3 215 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 SMARCC1Q92922 1105 aaPredicted RBP5.17□□□□□ -1.58
GPNMB-205ENST00000463011 TSR2Q969E8 191 aaKnown RBP5.17□□□□□ -1.58
GPNMB-205ENST00000463011 COL25A1Q9BXS0 654 aaPredicted RBP5.17□□□□□ -1.58
GPNMB-205ENST00000463011 MKRN2Q9H000 416 aaKnown RBP5.17□□□□□ -1.58
GPNMB-205ENST00000463011 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.17□□□□□ -1.58
GPNMB-205ENST00000463011 NDOR1Q9UHB4 597 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 AP4E1Q9UPM8 1137 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 SYNGAP1Q96PV0 1343 aa5.17□□□□□ -1.58
GPNMB-205ENST00000463011 PEX14O75381 377 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 KATNA1O75449 491 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 PPM1BO75688 479 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 CST3P01034 146 aaPredicted RBP5.16□□□□□ -1.58
GPNMB-205ENST00000463011 NEFMP07197 916 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 STRN3Q13033 797 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 PCBP1Q15365 356 aaKnown RBP eCLIP5.16□□□□□ -1.58
GPNMB-205ENST00000463011 DUOXA2Q1HG44 320 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 MAP4K3Q8IVH8 894 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 WDR75Q8IWA0 830 aaKnown RBP5.16□□□□□ -1.58
GPNMB-205ENST00000463011 GALNT6Q8NCL4 622 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 BVESQ8NE79 360 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 ADCY4Q8NFM4 1077 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 CYB5D2Q8WUJ1 264 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 ACDQ96AP0 544 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 CCDC136Q96JN2 1154 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 BTBD6Q96KE9 485 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 PSMD1Q99460 953 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 GBP3Q9H0R5 595 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 SSU72Q9NP77 194 aaKnown RBP5.16□□□□□ -1.58
GPNMB-205ENST00000463011 INTS7Q9NVH2 962 aaKnown RBP5.16□□□□□ -1.58
GPNMB-205ENST00000463011 SFMBT1Q9UHJ3 866 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 AKT3Q9Y243 479 aa5.16□□□□□ -1.58
GPNMB-205ENST00000463011 BLACEA4D250 179 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 FAM83GA6ND36 823 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 TPD52L2O43399 206 aaKnown RBP5.15□□□□□ -1.59
GPNMB-205ENST00000463011 PRC1O43663 620 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 EYA4O95677 639 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 CAPNS1P04632 268 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 CPEP16870 476 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 CD247P20963 164 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 NEK4P51957 841 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 TBX4P57082 545 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 MAP7Q14244 749 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 TTF1Q15361 905 aaPredicted RBP5.15□□□□□ -1.59
GPNMB-205ENST00000463011 ANKRD39Q53RE8 183 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 ILDR2Q71H61 639 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 DYMQ7RTS9 669 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 FGD2Q7Z6J4 655 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 CCDC146Q8IYE0 955 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 AHI1Q8N157 1196 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 KCT2Q8NC54 265 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 RIN3Q8TB24 985 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 ISL2Q96A47 359 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 MRGPRX3Q96LB0 322 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 TMPRSS13Q9BYE2 586 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 ATXN3LQ9H3M9 355 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 SLC52A2Q9HAB3 445 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 TRIM39Q9HCM9 518 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 RIPOR2Q9Y4F9 1068 aa5.15□□□□□ -1.59
GPNMB-205ENST00000463011 TNPO3Q9Y5L0 923 aaKnown RBP5.15□□□□□ -1.59
GPNMB-205ENST00000463011 OPA1O60313 960 aa5.14□□□□□ -1.59
GPNMB-205ENST00000463011 DLX3O60479 287 aa5.14□□□□□ -1.59
GPNMB-205ENST00000463011 KCNH1O95259 989 aa5.14□□□□□ -1.59
GPNMB-205ENST00000463011 WISP1O95388 367 aa5.14□□□□□ -1.59
GPNMB-205ENST00000463011 C6orf222P0C671 652 aaPredicted RBP5.14□□□□□ -1.59
GPNMB-205ENST00000463011 DRD2P14416 443 aa5.14□□□□□ -1.59
GPNMB-205ENST00000463011 NID1P14543 1247 aa5.14□□□□□ -1.59
GPNMB-205ENST00000463011 AUHQ13825 339 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms