RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 GPAA1O43292 621 aa22.71■■□□□ 1.23
VARS-220ENST00000461874 FARP2O94887 1054 aaPredicted RBP22.71■■□□□ 1.23
VARS-220ENST00000461874 TFRCP02786 760 aaKnown RBP22.71■■□□□ 1.23
VARS-220ENST00000461874 MX1P20591 662 aa22.71■■□□□ 1.23
VARS-220ENST00000461874 LPAR1Q92633 364 aa22.71■■□□□ 1.23
VARS-220ENST00000461874 SH2D4AQ9H788 454 aa22.71■■□□□ 1.23
VARS-220ENST00000461874 RPTORQ8N122 1335 aa22.71■■□□□ 1.23
VARS-220ENST00000461874 CEP290O15078 2479 aa22.7■■□□□ 1.22
VARS-220ENST00000461874 M0R2C6 588 aa22.7■■□□□ 1.22
VARS-220ENST00000461874 GNAT2P19087 354 aa22.7■■□□□ 1.22
VARS-220ENST00000461874 RGS2P41220 211 aa22.7■■□□□ 1.22
VARS-220ENST00000461874 HDAC1Q13547 482 aaPredicted RBP22.7■■□□□ 1.22
VARS-220ENST00000461874 ANKRD45Q5TZF3 282 aa22.7■■□□□ 1.22
VARS-220ENST00000461874 TRMT44Q8IYL2 757 aaKnown RBP22.7■■□□□ 1.22
VARS-220ENST00000461874 GCC1Q96CN9 775 aa22.7■■□□□ 1.22
VARS-220ENST00000461874 TANGO6Q9C0B7 1094 aa22.7■■□□□ 1.22
VARS-220ENST00000461874 VCPKMTQ9H867 229 aa22.7■■□□□ 1.22
VARS-220ENST00000461874 KANSL2Q9H9L4 492 aa22.7■■□□□ 1.22
VARS-220ENST00000461874 HMX1Q9NP08 348 aaPredicted RBP22.7■■□□□ 1.22
VARS-220ENST00000461874 PLXNB2O15031 1838 aa22.7■■□□□ 1.22
VARS-220ENST00000461874 SALL3Q9BXA9 1300 aa22.69■■□□□ 1.22
VARS-220ENST00000461874 MAP3K21Q5TCX8 1036 aa22.69■■□□□ 1.22
VARS-220ENST00000461874 CWC22Q9HCG8 908 aaKnown RBP22.69■■□□□ 1.22
VARS-220ENST00000461874 ZBTB47Q9UFB7 747 aaPredicted RBP22.69■■□□□ 1.22
VARS-220ENST00000461874 EEF2P13639 858 aaKnown RBP22.68■■□□□ 1.22
VARS-220ENST00000461874 SPICE1Q8N0Z3 855 aa22.68■■□□□ 1.22
VARS-220ENST00000461874 APBA2Q99767 749 aa22.68■■□□□ 1.22
VARS-220ENST00000461874 FSD1Q9BTV5 496 aa22.68■■□□□ 1.22
VARS-220ENST00000461874 HTATIP2Q9BUP3 242 aa22.68■■□□□ 1.22
VARS-220ENST00000461874 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.68■■□□□ 1.22
VARS-220ENST00000461874 EPB41L4AQ9HCS5 686 aaPredicted RBP22.68■■□□□ 1.22
VARS-220ENST00000461874 SLC15A5A6NIM6 579 aa22.67■■□□□ 1.22
VARS-220ENST00000461874 MINDY4BA8MYZ0 360 aa22.67■■□□□ 1.22
VARS-220ENST00000461874 PATL2C9JE40 543 aaKnown RBP22.67■■□□□ 1.22
VARS-220ENST00000461874 PRKAR2AP13861 404 aaKnown RBP22.67■■□□□ 1.22
VARS-220ENST00000461874 ZKSCAN1P17029 563 aaPredicted RBP22.67■■□□□ 1.22
VARS-220ENST00000461874 PTPREP23469 700 aa22.67■■□□□ 1.22
VARS-220ENST00000461874 DSG3P32926 999 aa22.67■■□□□ 1.22
VARS-220ENST00000461874 MAP2K5Q13163 448 aa22.67■■□□□ 1.22
VARS-220ENST00000461874 WDR78Q5VTH9 848 aa22.67■■□□□ 1.22
VARS-220ENST00000461874 DPF3Q92784 378 aa22.67■■□□□ 1.22
VARS-220ENST00000461874 ROBO3Q96MS0 1386 aa22.66■■□□□ 1.22
VARS-220ENST00000461874 H0YGN5 161 aa22.66■■□□□ 1.22
VARS-220ENST00000461874 WDR46O15213 610 aaKnown RBP22.66■■□□□ 1.22
VARS-220ENST00000461874 APPP05067 770 aa22.66■■□□□ 1.22
VARS-220ENST00000461874 RASA1P20936 1047 aa22.66■■□□□ 1.22
VARS-220ENST00000461874 TDO2P48775 406 aa22.66■■□□□ 1.22
VARS-220ENST00000461874 ATP2B2Q01814 1243 aa22.66■■□□□ 1.22
VARS-220ENST00000461874 AAMPQ13685 434 aa22.66■■□□□ 1.22
VARS-220ENST00000461874 CCL14Q16627 93 aa22.66■■□□□ 1.22
VARS-220ENST00000461874 ZMYM1Q5SVZ6 1142 aa22.66■■□□□ 1.22
VARS-220ENST00000461874 MB21D1Q8N884 522 aa22.66■■□□□ 1.22
VARS-220ENST00000461874 SEC62Q99442 399 aaKnown RBP22.66■■□□□ 1.22
VARS-220ENST00000461874 MKNK2Q9HBH9 465 aa22.66■■□□□ 1.22
VARS-220ENST00000461874 FLOT1O75955 427 aa22.65■■□□□ 1.22
VARS-220ENST00000461874 CACNB2Q08289 660 aaPredicted RBP22.65■■□□□ 1.22
VARS-220ENST00000461874 IFNL3Q8IZI9 196 aa22.65■■□□□ 1.22
VARS-220ENST00000461874 STK11IPQ8N1F8 1099 aa22.65■■□□□ 1.22
VARS-220ENST00000461874 MOV10L1Q9BXT6 1211 aaKnown RBP22.65■■□□□ 1.22
VARS-220ENST00000461874 SPATC1LQ9H0A9 340 aa22.65■■□□□ 1.22
VARS-220ENST00000461874 STAP2Q9UGK3 403 aa22.65■■□□□ 1.22
VARS-220ENST00000461874 IVNS1ABPQ9Y6Y0 642 aa22.65■■□□□ 1.22
VARS-220ENST00000461874 GRB14Q14449 540 aa22.64■■□□□ 1.21
VARS-220ENST00000461874 ANKLE1Q8NAG6 615 aa22.64■■□□□ 1.21
VARS-220ENST00000461874 NACAP1Q9BZK3 213 aa22.64■■□□□ 1.21
VARS-220ENST00000461874 MYH8P13535 1937 aa22.64■■□□□ 1.21
VARS-220ENST00000461874 HOXC6P09630 235 aa22.63■■□□□ 1.21
VARS-220ENST00000461874 HABP4Q5JVS0 413 aaKnown RBP22.63■■□□□ 1.21
VARS-220ENST00000461874 SHCBP1Q8NEM2 672 aa22.63■■□□□ 1.21
VARS-220ENST00000461874 ATG4CQ96DT6 458 aa22.63■■□□□ 1.21
VARS-220ENST00000461874 GOPCQ9HD26 462 aa22.63■■□□□ 1.21
VARS-220ENST00000461874 PDE1AP54750 535 aa22.62■■□□□ 1.21
VARS-220ENST00000461874 PAWRQ96IZ0 340 aaKnown RBP22.62■■□□□ 1.21
VARS-220ENST00000461874 ZNF287Q9HBT7 754 aa22.62■■□□□ 1.21
VARS-220ENST00000461874 NYAP2Q9P242 653 aa22.62■■□□□ 1.21
VARS-220ENST00000461874 OGDHLQ9ULD0 1010 aa22.62■■□□□ 1.21
VARS-220ENST00000461874 ADAMTS5Q9UNA0 930 aa22.62■■□□□ 1.21
VARS-220ENST00000461874 STRNO43815 780 aa22.61■■□□□ 1.21
VARS-220ENST00000461874 ERCC3P19447 782 aa22.61■■□□□ 1.21
VARS-220ENST00000461874 NECAB2Q7Z6G3 386 aa22.61■■□□□ 1.21
VARS-220ENST00000461874 DIS3LQ8TF46 1054 aaKnown RBP22.61■■□□□ 1.21
VARS-220ENST00000461874 EVI5LQ96CN4 794 aa22.61■■□□□ 1.21
VARS-220ENST00000461874 FLRT1Q9NZU1 646 aa22.61■■□□□ 1.21
VARS-220ENST00000461874 RLFQ13129 1914 aa22.61■■□□□ 1.21
VARS-220ENST00000461874 IGKV6D-41A0A0C4DH26 115 aa22.6■■□□□ 1.21
VARS-220ENST00000461874 PRDM1O75626 825 aa22.6■■□□□ 1.21
VARS-220ENST00000461874 CCND3P30281 292 aaPredicted RBP22.6■■□□□ 1.21
VARS-220ENST00000461874 MNX1P50219 401 aaPredicted RBP22.6■■□□□ 1.21
VARS-220ENST00000461874 PLS1Q14651 629 aa22.6■■□□□ 1.21
VARS-220ENST00000461874 MFSD14CQ5VZR4 134 aa22.6■■□□□ 1.21
VARS-220ENST00000461874 SAMD1Q6SPF0 538 aaPredicted RBP22.6■■□□□ 1.21
VARS-220ENST00000461874 ZNF444Q8N0Y2 327 aaPredicted RBP22.6■■□□□ 1.21
VARS-220ENST00000461874 NPLOC4Q8TAT6 608 aa22.6■■□□□ 1.21
VARS-220ENST00000461874 NAPBQ9H115 298 aa22.6■■□□□ 1.21
VARS-220ENST00000461874 MROH8Q9H579 483 aa22.6■■□□□ 1.21
VARS-220ENST00000461874 FBXO28Q9NVF7 368 aa22.6■■□□□ 1.21
VARS-220ENST00000461874 RAD21O60216 631 aa22.59■■□□□ 1.21
VARS-220ENST00000461874 TMEM132BQ14DG7 1078 aa22.59■■□□□ 1.21
VARS-220ENST00000461874 FAM83BQ5T0W9 1011 aa22.59■■□□□ 1.21
VARS-220ENST00000461874 RWDD1Q9H446 243 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms