RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 ARMT1Q9H993 441 aa8.82□□□□□ -1
RTN4-212ENST00000461004 TMOD2Q9NZR1 351 aa8.82□□□□□ -1
RTN4-212ENST00000461004 TLL2Q9Y6L7 1015 aa8.82□□□□□ -1
RTN4-212ENST00000461004 TRPM7Q96QT4 1865 aa8.81□□□□□ -1
RTN4-212ENST00000461004 MAGEB6P1A0A0J9YX57 407 aa8.81□□□□□ -1
RTN4-212ENST00000461004 FAM196BA6NMK8 535 aa8.81□□□□□ -1
RTN4-212ENST00000461004 SMIM22K7EJ46 135 aa8.81□□□□□ -1
RTN4-212ENST00000461004 M0R2C6 588 aa8.81□□□□□ -1
RTN4-212ENST00000461004 RNF113AO15541 343 aaKnown RBP8.81□□□□□ -1
RTN4-212ENST00000461004 TNNI2P48788 182 aa8.81□□□□□ -1
RTN4-212ENST00000461004 HUNKP57058 714 aa8.81□□□□□ -1
RTN4-212ENST00000461004 GRM1Q13255 1194 aa8.81□□□□□ -1
RTN4-212ENST00000461004 FKBP1CQ5VVH2 108 aa8.81□□□□□ -1
RTN4-212ENST00000461004 CYP4F22Q6NT55 531 aa8.81□□□□□ -1
RTN4-212ENST00000461004 PDXDC2PQ6P474 469 aa8.81□□□□□ -1
RTN4-212ENST00000461004 FAM83AQ86UY5 434 aa8.81□□□□□ -1
RTN4-212ENST00000461004 C2orf69Q8N8R5 385 aa8.81□□□□□ -1
RTN4-212ENST00000461004 ARMC2Q8NEN0 867 aa8.81□□□□□ -1
RTN4-212ENST00000461004 SDR42E1Q8WUS8 393 aa8.81□□□□□ -1
RTN4-212ENST00000461004 CCDC136Q96JN2 1154 aa8.81□□□□□ -1
RTN4-212ENST00000461004 CLMNQ96JQ2 1002 aa8.81□□□□□ -1
RTN4-212ENST00000461004 ZIC5Q96T25 663 aa8.81□□□□□ -1
RTN4-212ENST00000461004 OSBPL3Q9H4L5 887 aa8.81□□□□□ -1
RTN4-212ENST00000461004 SAP30BPQ9UHR5 308 aaKnown RBP8.81□□□□□ -1
RTN4-212ENST00000461004 ANGEL1Q9UNK9 670 aaKnown RBP8.81□□□□□ -1
RTN4-212ENST00000461004 PPP2R3BQ9Y5P8 575 aa8.81□□□□□ -1
RTN4-212ENST00000461004 ECM29Q5VYK3 1845 aa8.81□□□□□ -1
RTN4-212ENST00000461004 DOCK2Q92608 1830 aa8.81□□□□□ -1
RTN4-212ENST00000461004 ZBBXA8MT70 800 aa8.8□□□□□ -1
RTN4-212ENST00000461004 ENTPD3O75355 529 aa8.8□□□□□ -1
RTN4-212ENST00000461004 MBD4O95243 580 aa8.8□□□□□ -1
RTN4-212ENST00000461004 BAG3O95817 575 aa8.8□□□□□ -1
RTN4-212ENST00000461004 GSPT1P15170 499 aaKnown RBP8.8□□□□□ -1
RTN4-212ENST00000461004 RPIAP49247 311 aa8.8□□□□□ -1
RTN4-212ENST00000461004 VEGFBP49765 207 aa8.8□□□□□ -1
RTN4-212ENST00000461004 TNFAIP1Q13829 316 aa8.8□□□□□ -1
RTN4-212ENST00000461004 UBE3CQ15386 1083 aa8.8□□□□□ -1
RTN4-212ENST00000461004 DEFB115Q30KQ5 88 aa8.8□□□□□ -1
RTN4-212ENST00000461004 SUPT20HL1Q3ZLR7 823 aa8.8□□□□□ -1
RTN4-212ENST00000461004 CCDC129Q6ZRS4 1044 aa8.8□□□□□ -1
RTN4-212ENST00000461004 CENPQQ7L2Z9 268 aaPredicted RBP8.8□□□□□ -1
RTN4-212ENST00000461004 SH3RF1Q7Z6J0 888 aa8.8□□□□□ -1
RTN4-212ENST00000461004 RILPL2Q969X0 211 aa8.8□□□□□ -1
RTN4-212ENST00000461004 NOL10Q9BSC4 688 aaKnown RBP8.8□□□□□ -1
RTN4-212ENST00000461004 FSD1Q9BTV5 496 aa8.8□□□□□ -1
RTN4-212ENST00000461004 OSBPL5Q9H0X9 879 aaPredicted RBP8.8□□□□□ -1
RTN4-212ENST00000461004 PALD1Q9ULE6 856 aa8.8□□□□□ -1
RTN4-212ENST00000461004 FLT1P17948 1338 aa8.8□□□□□ -1
RTN4-212ENST00000461004 MAST2Q6P0Q8 1798 aa8.79□□□□□ -1
RTN4-212ENST00000461004 ATRNL1Q5VV63 1379 aa8.79□□□□□ -1
RTN4-212ENST00000461004 RASSF10A6NK89 507 aa8.79□□□□□ -1
RTN4-212ENST00000461004 AOC2O75106 756 aa8.79□□□□□ -1
RTN4-212ENST00000461004 CYP2D6P10635 497 aa8.79□□□□□ -1
RTN4-212ENST00000461004 NF2P35240 595 aa8.79□□□□□ -1
RTN4-212ENST00000461004 SLC19A1P41440 591 aa8.79□□□□□ -1
RTN4-212ENST00000461004 NR1H3Q13133 447 aa8.79□□□□□ -1
RTN4-212ENST00000461004 RRP1BQ14684 758 aaKnown RBP8.79□□□□□ -1
RTN4-212ENST00000461004 LDLRAD1Q5T700 205 aa8.79□□□□□ -1
RTN4-212ENST00000461004 ZSCAN29Q8IWY8 852 aaPredicted RBP8.79□□□□□ -1
RTN4-212ENST00000461004 GPKOWQ92917 476 aaPredicted RBP eCLIP8.79□□□□□ -1
RTN4-212ENST00000461004 EVI5LQ96CN4 794 aa8.79□□□□□ -1
RTN4-212ENST00000461004 FAM227BQ96M60 508 aa8.79□□□□□ -1
RTN4-212ENST00000461004 STRBPQ96SI9 672 aaKnown RBP8.79□□□□□ -1
RTN4-212ENST00000461004 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.79□□□□□ -1
RTN4-212ENST00000461004 CYP2D7A0A087X1C5 515 aa8.78□□□□□ -1
RTN4-212ENST00000461004 FAM155AB1AL88 458 aaPredicted RBP8.78□□□□□ -1
RTN4-212ENST00000461004 ZBTB24O43167 697 aaPredicted RBP8.78□□□□□ -1
RTN4-212ENST00000461004 IGSF3O75054 1194 aa8.78□□□□□ -1
RTN4-212ENST00000461004 SDSP20132 328 aa8.78□□□□□ -1
RTN4-212ENST00000461004 INPP5BP32019 993 aa8.78□□□□□ -1
RTN4-212ENST00000461004 USP5P45974 858 aa8.78□□□□□ -1
RTN4-212ENST00000461004 PLCD1P51178 756 aa8.78□□□□□ -1
RTN4-212ENST00000461004 ZNF157P51786 506 aaPredicted RBP8.78□□□□□ -1
RTN4-212ENST00000461004 MAP3K11Q16584 847 aa8.78□□□□□ -1
RTN4-212ENST00000461004 SHROOM1Q2M3G4 852 aaPredicted RBP8.78□□□□□ -1
RTN4-212ENST00000461004 ZMYM1Q5SVZ6 1142 aa8.78□□□□□ -1
RTN4-212ENST00000461004 TTC22Q5TAA0 569 aa8.78□□□□□ -1
RTN4-212ENST00000461004 ZSCAN25Q6NSZ9 544 aa8.78□□□□□ -1
RTN4-212ENST00000461004 RGMBQ6NW40 437 aa8.78□□□□□ -1
RTN4-212ENST00000461004 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.78□□□□□ -1
RTN4-212ENST00000461004 ARMC9Q7Z3E5 817 aa8.78□□□□□ -1
RTN4-212ENST00000461004 PNMA1Q8ND90 353 aa8.78□□□□□ -1
RTN4-212ENST00000461004 APPBP2Q92624 585 aa8.78□□□□□ -1
RTN4-212ENST00000461004 ZKSCAN4Q969J2 545 aaPredicted RBP8.78□□□□□ -1
RTN4-212ENST00000461004 KLRG1Q96E93 195 aa8.78□□□□□ -1
RTN4-212ENST00000461004 CAPNS2Q96L46 248 aa8.78□□□□□ -1
RTN4-212ENST00000461004 CSRNP1Q96S65 589 aa8.78□□□□□ -1
RTN4-212ENST00000461004 PPP4R2Q9NY27 417 aa8.78□□□□□ -1
RTN4-212ENST00000461004 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.78□□□□□ -1
RTN4-212ENST00000461004 A0A0D9SFI3 127 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 GSG1L2A8MUP6 293 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 PHF20L1A8MW92 1017 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 FOXP2O15409 715 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 GPAA1O43292 621 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 PPP1R12BO60237 982 aaPredicted RBP8.77□□□□□ -1.01
RTN4-212ENST00000461004 FKBP1BP68106 108 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 JAG1P78504 1218 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 PTK2Q05397 1052 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 NMIQ13287 307 aaPredicted RBP8.77□□□□□ -1.01
RTN4-212ENST00000461004 VGLL4Q14135 290 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms