RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 EGFLAMQ63HQ2 1017 aa8.03□□□□□ -1.12
CCDC50-203ENST00000460064 CD163Q86VB7 1156 aa8.03□□□□□ -1.12
CCDC50-203ENST00000460064 TOP6BLQ8N6T0 577 aa8.03□□□□□ -1.12
CCDC50-203ENST00000460064 ZNF669Q96BR6 464 aaPredicted RBP8.03□□□□□ -1.12
CCDC50-203ENST00000460064 EPN3Q9H201 632 aa8.03□□□□□ -1.12
CCDC50-203ENST00000460064 KANSL2Q9H9L4 492 aa8.03□□□□□ -1.12
CCDC50-203ENST00000460064 TPX2Q9ULW0 747 aaKnown RBP8.03□□□□□ -1.12
CCDC50-203ENST00000460064 RNF225M0QZC1 329 aaPredicted RBP8.02□□□□□ -1.13
CCDC50-203ENST00000460064 EPHX1P07099 455 aa8.02□□□□□ -1.13
CCDC50-203ENST00000460064 NAT2P11245 290 aa8.02□□□□□ -1.13
CCDC50-203ENST00000460064 CYP7A1P22680 504 aa8.02□□□□□ -1.13
CCDC50-203ENST00000460064 RNF4P78317 190 aa8.02□□□□□ -1.13
CCDC50-203ENST00000460064 SLC10A6Q3KNW5 377 aa8.02□□□□□ -1.13
CCDC50-203ENST00000460064 ANKRD39Q53RE8 183 aa8.02□□□□□ -1.13
CCDC50-203ENST00000460064 DCAF15Q66K64 600 aa8.02□□□□□ -1.13
CCDC50-203ENST00000460064 ZNF662Q6ZS27 426 aa8.02□□□□□ -1.13
CCDC50-203ENST00000460064 VWCEQ96DN2 955 aa8.02□□□□□ -1.13
CCDC50-203ENST00000460064 HAUS7Q99871 368 aa8.02□□□□□ -1.13
CCDC50-203ENST00000460064 FAM83CQ9BQN1 747 aa8.02□□□□□ -1.13
CCDC50-203ENST00000460064 LRP2BPQ9P2M1 347 aa8.02□□□□□ -1.13
CCDC50-203ENST00000460064 SBNO2Q9Y2G9 1366 aa8.01□□□□□ -1.13
CCDC50-203ENST00000460064 IQCA1LA6NCM1 817 aa8.01□□□□□ -1.13
CCDC50-203ENST00000460064 AGRPO00253 132 aa8.01□□□□□ -1.13
CCDC50-203ENST00000460064 LEFTY1O75610 366 aa8.01□□□□□ -1.13
CCDC50-203ENST00000460064 EOMESO95936 686 aa8.01□□□□□ -1.13
CCDC50-203ENST00000460064 ZNF143P52747 638 aaPredicted RBP8.01□□□□□ -1.13
CCDC50-203ENST00000460064 AUHQ13825 339 aaKnown RBP8.01□□□□□ -1.13
CCDC50-203ENST00000460064 THAP3Q8WTV1 239 aaPredicted RBP8.01□□□□□ -1.13
CCDC50-203ENST00000460064 PPP1R14AQ96A00 147 aa8.01□□□□□ -1.13
CCDC50-203ENST00000460064 DCAF5Q96JK2 942 aa8.01□□□□□ -1.13
CCDC50-203ENST00000460064 FGD4Q96M96 766 aa8.01□□□□□ -1.13
CCDC50-203ENST00000460064 DUSP23Q9BVJ7 150 aa8.01□□□□□ -1.13
CCDC50-203ENST00000460064 SPATA9Q9BWV2 254 aa8.01□□□□□ -1.13
CCDC50-203ENST00000460064 FANCLQ9NW38 375 aa8.01□□□□□ -1.13
CCDC50-203ENST00000460064 FBXL21Q9UKT6 434 aa8.01□□□□□ -1.13
CCDC50-203ENST00000460064 ESYT3A0FGR9 886 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 HMX2A2RU54 273 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 ENPP3O14638 875 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 FAM87AP0C7U9 286 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 CD247P20963 164 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 GATA4P43694 442 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 C2orf27AQ580R0 203 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 C7orf61Q8IZ16 206 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 LRRC47Q8N1G4 583 aaKnown RBP8□□□□□ -1.13
CCDC50-203ENST00000460064 RNF141Q8WVD5 230 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 APPBP2Q92624 585 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 TP53INP1Q96A56 240 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 FBXL18Q96ME1 805 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 TBC1D32Q96NH3 1257 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 SSBP4Q9BWG4 385 aaPredicted RBP8□□□□□ -1.13
CCDC50-203ENST00000460064 STOML1Q9UBI4 398 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 SUSD2Q9UGT4 822 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 WDR3Q9UNX4 943 aaKnown RBP eCLIP8□□□□□ -1.13
CCDC50-203ENST00000460064 LEMD3Q9Y2U8 911 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 SUGT1Q9Y2Z0 365 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 ZNF451Q9Y4E5 1061 aa8□□□□□ -1.13
CCDC50-203ENST00000460064 COL17A1Q9UMD9 1497 aaPredicted RBP8□□□□□ -1.13
CCDC50-203ENST00000460064 ANKRD62A6NC57 917 aa7.99□□□□□ -1.13
CCDC50-203ENST00000460064 CBFA2T2O43439 604 aa7.99□□□□□ -1.13
CCDC50-203ENST00000460064 PPM1BO75688 479 aa7.99□□□□□ -1.13
CCDC50-203ENST00000460064 NOL9Q5SY16 702 aaKnown RBP7.99□□□□□ -1.13
CCDC50-203ENST00000460064 HOMER1Q86YM7 354 aa7.99□□□□□ -1.13
CCDC50-203ENST00000460064 LRRN4CLQ8ND94 238 aa7.99□□□□□ -1.13
CCDC50-203ENST00000460064 ASPNQ9BXN1 380 aa7.99□□□□□ -1.13
CCDC50-203ENST00000460064 KLHL25Q9H0H3 589 aa7.99□□□□□ -1.13
CCDC50-203ENST00000460064 GBP3Q9H0R5 595 aa7.99□□□□□ -1.13
CCDC50-203ENST00000460064 RAXQ9Y2V3 346 aa7.99□□□□□ -1.13
CCDC50-203ENST00000460064 CNTNAP4Q9C0A0 1308 aa7.99□□□□□ -1.13
CCDC50-203ENST00000460064 LRRN2O75325 713 aa7.98□□□□□ -1.13
CCDC50-203ENST00000460064 CDC45O75419 566 aa7.98□□□□□ -1.13
CCDC50-203ENST00000460064 SQSTM1Q13501 440 aa7.98□□□□□ -1.13
CCDC50-203ENST00000460064 NBPF9Q3BBW0 867 aa7.98□□□□□ -1.13
CCDC50-203ENST00000460064 OGFOD3Q6PK18 319 aa7.98□□□□□ -1.13
CCDC50-203ENST00000460064 JMYQ8N9B5 988 aa7.98□□□□□ -1.13
CCDC50-203ENST00000460064 SGSM3Q96HU1 749 aa7.98□□□□□ -1.13
CCDC50-203ENST00000460064 PCDHB12Q9Y5F1 795 aa7.98□□□□□ -1.13
CCDC50-203ENST00000460064 CBX7O95931 251 aa7.97□□□□□ -1.13
CCDC50-203ENST00000460064 FAM153BP0C7A2 387 aa7.97□□□□□ -1.13
CCDC50-203ENST00000460064 SFRP5Q5T4F7 317 aa7.97□□□□□ -1.13
CCDC50-203ENST00000460064 ZBTB38Q8NAP3 1195 aaPredicted RBP7.97□□□□□ -1.13
CCDC50-203ENST00000460064 C7orf69Q9H7B7 122 aa7.97□□□□□ -1.13
CCDC50-203ENST00000460064 GP6Q9HCN6 339 aa7.97□□□□□ -1.13
CCDC50-203ENST00000460064 PRDM5Q9NQX1 630 aaPredicted RBP7.97□□□□□ -1.13
CCDC50-203ENST00000460064 TMEM260Q9NX78 707 aa7.97□□□□□ -1.13
CCDC50-203ENST00000460064 WHRNQ9P202 907 aa7.97□□□□□ -1.13
CCDC50-203ENST00000460064 APEX2Q9UBZ4 518 aa7.97□□□□□ -1.13
CCDC50-203ENST00000460064 PTCH2Q9Y6C5 1203 aa7.97□□□□□ -1.13
CCDC50-203ENST00000460064 A0A1W2PQU0 124 aa7.96□□□□□ -1.14
CCDC50-203ENST00000460064 RBAK-RBAKDNI3L0D1 243 aa7.96□□□□□ -1.14
CCDC50-203ENST00000460064 NOP56O00567 594 aaKnown RBP7.96□□□□□ -1.14
CCDC50-203ENST00000460064 ITGA4P13612 1032 aa7.96□□□□□ -1.14
CCDC50-203ENST00000460064 NCLP19338 710 aaKnown RBP7.96□□□□□ -1.14
CCDC50-203ENST00000460064 ADMP35318 185 aa7.96□□□□□ -1.14
CCDC50-203ENST00000460064 CYP27C1Q4G0S4 372 aa7.96□□□□□ -1.14
CCDC50-203ENST00000460064 FBXL6Q8N531 539 aa7.96□□□□□ -1.14
CCDC50-203ENST00000460064 BVESQ8NE79 360 aa7.96□□□□□ -1.14
CCDC50-203ENST00000460064 ADCY4Q8NFM4 1077 aa7.96□□□□□ -1.14
CCDC50-203ENST00000460064 BRF1Q92994 677 aa7.96□□□□□ -1.14
CCDC50-203ENST00000460064 COX4I2Q96KJ9 171 aa7.96□□□□□ -1.14
CCDC50-203ENST00000460064 GTF2IRD1Q9UHL9 959 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms