RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 FAM110CQ1W6H9 321 aa13.46□□□□□ -0.25
HDAC9-217ENST00000455069 NKX2-3Q8TAU0 364 aa13.46□□□□□ -0.25
HDAC9-217ENST00000455069 RPAP3Q9H6T3 665 aaPredicted RBP13.46□□□□□ -0.25
HDAC9-217ENST00000455069 MKNK2Q9HBH9 465 aa13.46□□□□□ -0.25
HDAC9-217ENST00000455069 TXNRD2Q9NNW7 524 aa13.46□□□□□ -0.25
HDAC9-217ENST00000455069 PTPN22Q9Y2R2 807 aa13.46□□□□□ -0.25
HDAC9-217ENST00000455069 MKI67P46013 3256 aaKnown RBP13.45□□□□□ -0.26
HDAC9-217ENST00000455069 RBBP6Q7Z6E9 1792 aaKnown RBP13.45□□□□□ -0.26
HDAC9-217ENST00000455069 HIP1O00291 1037 aa13.45□□□□□ -0.26
HDAC9-217ENST00000455069 CHMLP26374 656 aa13.45□□□□□ -0.26
HDAC9-217ENST00000455069 PSMC4P43686 418 aa13.45□□□□□ -0.26
HDAC9-217ENST00000455069 FAM47AQ5JRC9 791 aa13.45□□□□□ -0.26
HDAC9-217ENST00000455069 CATSPERGQ6ZRH7 1159 aa13.45□□□□□ -0.26
HDAC9-217ENST00000455069 TBC1D10CQ8IV04 446 aa13.45□□□□□ -0.26
HDAC9-217ENST00000455069 CEP95Q96GE4 821 aa13.45□□□□□ -0.26
HDAC9-217ENST00000455069 VCPKMTQ9H867 229 aa13.45□□□□□ -0.26
HDAC9-217ENST00000455069 KANSL2Q9H9L4 492 aa13.45□□□□□ -0.26
HDAC9-217ENST00000455069 ARHGEF10LQ9HCE6 1279 aa13.45□□□□□ -0.26
HDAC9-217ENST00000455069 MORF4L1Q9UBU8 362 aa13.45□□□□□ -0.26
HDAC9-217ENST00000455069 USP17L15C9J2P7 530 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 USP17L13C9JLJ4 530 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 USP17L11C9JVI0 530 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 USP17L18D6R9N7 530 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 USP17L22D6RA61 530 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 USP17L17D6RBQ6 530 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 USP17L19D6RCP7 530 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 USP17L20D6RJB6 530 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 CNMDO75829 334 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 FGRP09769 529 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 GCLCP48506 637 aaPredicted RBP13.44□□□□□ -0.26
HDAC9-217ENST00000455069 HAND2P61296 217 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 PDE4BQ07343 736 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 USP17L24Q0WX57 530 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 KIF22Q14807 665 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 ZNF444Q8N0Y2 327 aaPredicted RBP13.44□□□□□ -0.26
HDAC9-217ENST00000455069 SPICE1Q8N0Z3 855 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 NEDD1Q8NHV4 660 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 CCDC136Q96JN2 1154 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 RBPJLQ9UBG7 517 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 PTCH2Q9Y6C5 1203 aa13.44□□□□□ -0.26
HDAC9-217ENST00000455069 RAD50Q92878 1312 aa13.43□□□□□ -0.26
HDAC9-217ENST00000455069 SPDYE16A6NNV3 312 aaPredicted RBP13.43□□□□□ -0.26
HDAC9-217ENST00000455069 ORC4O43929 436 aa13.43□□□□□ -0.26
HDAC9-217ENST00000455069 SLC3A2P08195 630 aaKnown RBP13.43□□□□□ -0.26
HDAC9-217ENST00000455069 MFAP1P55081 439 aaKnown RBP13.43□□□□□ -0.26
HDAC9-217ENST00000455069 TFAP4Q01664 338 aa13.43□□□□□ -0.26
HDAC9-217ENST00000455069 ATP2B2Q01814 1243 aa13.43□□□□□ -0.26
HDAC9-217ENST00000455069 LPAR1Q92633 364 aa13.43□□□□□ -0.26
HDAC9-217ENST00000455069 DSCC1Q9BVC3 393 aa13.43□□□□□ -0.26
HDAC9-217ENST00000455069 ZNF287Q9HBT7 754 aa13.43□□□□□ -0.26
HDAC9-217ENST00000455069 MTMR4Q9NYA4 1195 aa13.43□□□□□ -0.26
HDAC9-217ENST00000455069 NYAP2Q9P242 653 aa13.43□□□□□ -0.26
HDAC9-217ENST00000455069 NEDD4P46934 1319 aa13.42□□□□□ -0.26
HDAC9-217ENST00000455069 NMT2O60551 498 aa13.42□□□□□ -0.26
HDAC9-217ENST00000455069 FMNL1O95466 1100 aaPredicted RBP13.42□□□□□ -0.26
HDAC9-217ENST00000455069 NEFLP07196 543 aa13.42□□□□□ -0.26
HDAC9-217ENST00000455069 TSPY3P0CV98 308 aa13.42□□□□□ -0.26
HDAC9-217ENST00000455069 TSPY8P0CW00 308 aa13.42□□□□□ -0.26
HDAC9-217ENST00000455069 FCGRTP55899 365 aa13.42□□□□□ -0.26
HDAC9-217ENST00000455069 PRKCZQ05513 592 aa13.42□□□□□ -0.26
HDAC9-217ENST00000455069 Q3C1V9 767 aa13.42□□□□□ -0.26
HDAC9-217ENST00000455069 PRPF38BQ5VTL8 546 aaKnown RBP13.42□□□□□ -0.26
HDAC9-217ENST00000455069 LBX2Q6XYB7 198 aa13.42□□□□□ -0.26
HDAC9-217ENST00000455069 SH2D4AQ9H788 454 aa13.42□□□□□ -0.26
HDAC9-217ENST00000455069 IL17RBQ9NRM6 502 aa13.42□□□□□ -0.26
HDAC9-217ENST00000455069 SRRDQ9UH36 339 aa13.42□□□□□ -0.26
HDAC9-217ENST00000455069 GABRQQ9UN88 632 aa13.42□□□□□ -0.26
HDAC9-217ENST00000455069 MYPNQ86TC9 1320 aa13.41□□□□□ -0.26
HDAC9-217ENST00000455069 WDR46O15213 610 aaKnown RBP13.41□□□□□ -0.26
HDAC9-217ENST00000455069 GNRH1P01148 92 aa13.41□□□□□ -0.26
HDAC9-217ENST00000455069 CENPBP07199 599 aaPredicted RBP13.41□□□□□ -0.26
HDAC9-217ENST00000455069 ERVK-9P63128 1117 aa13.41□□□□□ -0.26
HDAC9-217ENST00000455069 ERVK-24P63145 666 aa13.41□□□□□ -0.26
HDAC9-217ENST00000455069 LRRC47Q8N1G4 583 aaKnown RBP13.41□□□□□ -0.26
HDAC9-217ENST00000455069 STAG1Q8WVM7 1258 aa13.41□□□□□ -0.26
HDAC9-217ENST00000455069 ARMC5Q96C12 935 aa13.41□□□□□ -0.26
HDAC9-217ENST00000455069 NUP88Q99567 741 aaPredicted RBP13.41□□□□□ -0.26
HDAC9-217ENST00000455069 PAGR1Q9BTK6 254 aa13.41□□□□□ -0.26
HDAC9-217ENST00000455069 TANGO6Q9C0B7 1094 aa13.41□□□□□ -0.26
HDAC9-217ENST00000455069 PORCNQ9H237 461 aa13.41□□□□□ -0.26
HDAC9-217ENST00000455069 FBXO28Q9NVF7 368 aa13.41□□□□□ -0.26
HDAC9-217ENST00000455069 BTBD7Q9P203 1132 aa13.41□□□□□ -0.26
HDAC9-217ENST00000455069 CLIP2Q9UDT6 1046 aa13.41□□□□□ -0.26
HDAC9-217ENST00000455069 ZNF236Q9UL36 1845 aa13.41□□□□□ -0.26
HDAC9-217ENST00000455069 CEP290O15078 2479 aa13.4□□□□□ -0.26
HDAC9-217ENST00000455069 POTEFA5A3E0 1075 aa13.4□□□□□ -0.26
HDAC9-217ENST00000455069 TSPY2A6NKD2 308 aa13.4□□□□□ -0.26
HDAC9-217ENST00000455069 TNPO2O14787 897 aaKnown RBP13.4□□□□□ -0.26
HDAC9-217ENST00000455069 SGSM2O43147 1006 aa13.4□□□□□ -0.26
HDAC9-217ENST00000455069 RANBP6O60518 1105 aaKnown RBP13.4□□□□□ -0.26
HDAC9-217ENST00000455069 NDUFB10O96000 172 aa13.4□□□□□ -0.26
HDAC9-217ENST00000455069 NOVP48745 357 aa13.4□□□□□ -0.26
HDAC9-217ENST00000455069 PTH1RQ03431 593 aa13.4□□□□□ -0.26
HDAC9-217ENST00000455069 ARHGEF6Q15052 776 aa13.4□□□□□ -0.26
HDAC9-217ENST00000455069 BMP2KLQ5H9B9 411 aa13.4□□□□□ -0.26
HDAC9-217ENST00000455069 FAM83BQ5T0W9 1011 aa13.4□□□□□ -0.26
HDAC9-217ENST00000455069 AKNAD1Q5T1N1 836 aa13.4□□□□□ -0.26
HDAC9-217ENST00000455069 RASGRP2Q7LDG7 609 aa13.4□□□□□ -0.26
HDAC9-217ENST00000455069 GPRC5AQ8NFJ5 357 aa13.4□□□□□ -0.26
HDAC9-217ENST00000455069 MKL1Q969V6 931 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms