RNA–Protein interactions for RNA: ENST00000454043.1

LINC00299-204, long intergenic non-protein coding RNA 299, humanhuman

TSL 4

Gene LINC00299, Length 591 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-204ENST00000454043 C2orf49Q9BVC5 232 aaPredicted RBP9.23□□□□□ -0.93
LINC00299-204ENST00000454043 PUS3Q9BZE2 481 aaKnown RBP9.23□□□□□ -0.93
LINC00299-204ENST00000454043 ANKRD2Q9GZV1 360 aa9.23□□□□□ -0.93
LINC00299-204ENST00000454043 DIAPH3Q9NSV4 1193 aa9.23□□□□□ -0.93
LINC00299-204ENST00000454043 BSDC1Q9NW68 430 aaPredicted RBP9.23□□□□□ -0.93
LINC00299-204ENST00000454043 MARK1Q9P0L2 795 aa9.23□□□□□ -0.93
LINC00299-204ENST00000454043 KLF15Q9UIH9 416 aa9.23□□□□□ -0.93
LINC00299-204ENST00000454043 DBNLQ9UJU6 430 aaKnown RBP9.23□□□□□ -0.93
LINC00299-204ENST00000454043 USP17L15C9J2P7 530 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 USP17L10C9JJH3 530 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 USP17L13C9JLJ4 530 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 USP17L12C9JPN9 530 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 USP17L11C9JVI0 530 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 USP17L21D6R901 530 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 USP17L18D6R9N7 530 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 USP17L22D6RA61 530 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 USP17L17D6RBQ6 530 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 USP17L19D6RCP7 530 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 USP17L20D6RJB6 530 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 SERPINB2P05120 415 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 UQCRFS1P1P0C7P4 283 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 CHMLP26374 656 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 TM4SF1P30408 202 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 RPS8P62241 208 aaKnown RBP9.22□□□□□ -0.93
LINC00299-204ENST00000454043 USP17L24Q0WX57 530 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 TTC39AQ5SRH9 613 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 RPGRQ92834 1020 aaKnown RBP9.22□□□□□ -0.93
LINC00299-204ENST00000454043 IPO9Q96P70 1041 aaKnown RBP9.22□□□□□ -0.93
LINC00299-204ENST00000454043 HAUS7Q99871 368 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 HINFPQ9BQA5 517 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 PHACTR1Q9C0D0 580 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 BOLA2Q9H3K6 86 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 ABCC12Q96J65 1359 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 BCORQ6W2J9 1755 aa9.22□□□□□ -0.93
LINC00299-204ENST00000454043 TAF1LQ8IZX4 1826 aa9.21□□□□□ -0.93
LINC00299-204ENST00000454043 SCN7AQ01118 1682 aa9.21□□□□□ -0.93
LINC00299-204ENST00000454043 RBM25P49756 843 aaKnown RBP9.21□□□□□ -0.94
LINC00299-204ENST00000454043 TTF1Q15361 905 aaPredicted RBP9.21□□□□□ -0.94
LINC00299-204ENST00000454043 SLCO4C1Q6ZQN7 724 aa9.21□□□□□ -0.94
LINC00299-204ENST00000454043 RBM17Q96I25 401 aaKnown RBP9.21□□□□□ -0.94
LINC00299-204ENST00000454043 ZNF512BQ96KM6 892 aaPredicted RBP9.21□□□□□ -0.94
LINC00299-204ENST00000454043 CAMKK2Q96RR4 588 aa9.21□□□□□ -0.94
LINC00299-204ENST00000454043 DBNDD2Q9BQY9 259 aa9.21□□□□□ -0.94
LINC00299-204ENST00000454043 FSD1Q9BTV5 496 aa9.21□□□□□ -0.94
LINC00299-204ENST00000454043 AVENQ9NQS1 362 aaPredicted RBP9.21□□□□□ -0.94
LINC00299-204ENST00000454043 GNL3LQ9NVN8 582 aaKnown RBP9.21□□□□□ -0.94
LINC00299-204ENST00000454043 RIC1Q4ADV7 1423 aa9.21□□□□□ -0.94
LINC00299-204ENST00000454043 PHF20L1A8MW92 1017 aa9.2□□□□□ -0.94
LINC00299-204ENST00000454043 EPXP11678 715 aa9.2□□□□□ -0.94
LINC00299-204ENST00000454043 UBE4AQ14139 1066 aa9.2□□□□□ -0.94
LINC00299-204ENST00000454043 SLC15A2Q16348 729 aa9.2□□□□□ -0.94
LINC00299-204ENST00000454043 ZSCAN25Q6NSZ9 544 aa9.2□□□□□ -0.94
LINC00299-204ENST00000454043 SMIM5Q71RC9 77 aa9.2□□□□□ -0.94
LINC00299-204ENST00000454043 TMC4Q7Z404 712 aa9.2□□□□□ -0.94
LINC00299-204ENST00000454043 AMIGO3Q86WK7 504 aa9.2□□□□□ -0.94
LINC00299-204ENST00000454043 COL23A1Q86Y22 540 aaPredicted RBP9.2□□□□□ -0.94
LINC00299-204ENST00000454043 ALDH16A1Q8IZ83 802 aa9.2□□□□□ -0.94
LINC00299-204ENST00000454043 BTBD6Q96KE9 485 aa9.2□□□□□ -0.94
LINC00299-204ENST00000454043 TMX4Q9H1E5 349 aaPredicted RBP9.2□□□□□ -0.94
LINC00299-204ENST00000454043 SEC31BQ9NQW1 1179 aa9.2□□□□□ -0.94
LINC00299-204ENST00000454043 TLR7Q9NYK1 1049 aaKnown RBP9.2□□□□□ -0.94
LINC00299-204ENST00000454043 ANKIB1Q9P2G1 1089 aa9.2□□□□□ -0.94
LINC00299-204ENST00000454043 RAD50Q92878 1312 aa9.2□□□□□ -0.94
LINC00299-204ENST00000454043 RFX7Q2KHR2 1363 aa9.2□□□□□ -0.94
LINC00299-204ENST00000454043 LGR5O75473 907 aa9.19□□□□□ -0.94
LINC00299-204ENST00000454043 BBOX1O75936 387 aa9.19□□□□□ -0.94
LINC00299-204ENST00000454043 MAP4K4O95819 1239 aaPredicted RBP9.19□□□□□ -0.94
LINC00299-204ENST00000454043 ZFYP08048 801 aaPredicted RBP9.19□□□□□ -0.94
LINC00299-204ENST00000454043 RFX1P22670 979 aa9.19□□□□□ -0.94
LINC00299-204ENST00000454043 PDE6BP35913 854 aa9.19□□□□□ -0.94
LINC00299-204ENST00000454043 KCNJ4P48050 445 aa9.19□□□□□ -0.94
LINC00299-204ENST00000454043 SNRPNP63162 240 aaKnown RBP9.19□□□□□ -0.94
LINC00299-204ENST00000454043 CHRNDQ07001 517 aa9.19□□□□□ -0.94
LINC00299-204ENST00000454043 SFSWAPQ12872 951 aaKnown RBP9.19□□□□□ -0.94
LINC00299-204ENST00000454043 EZH2Q15910 746 aaKnown RBP9.19□□□□□ -0.94
LINC00299-204ENST00000454043 ZNF827Q17R98 1081 aa9.19□□□□□ -0.94
LINC00299-204ENST00000454043 CAVIN4Q5BKX8 364 aa9.19□□□□□ -0.94
LINC00299-204ENST00000454043 PRR5LQ6MZQ0 368 aa9.19□□□□□ -0.94
LINC00299-204ENST00000454043 KCTD17Q8N5Z5 321 aa9.19□□□□□ -0.94
LINC00299-204ENST00000454043 VGLL2Q8N8G2 317 aa9.19□□□□□ -0.94
LINC00299-204ENST00000454043 DNAJC2Q99543 621 aaKnown RBP9.19□□□□□ -0.94
LINC00299-204ENST00000454043 BRIP1Q9BX63 1249 aa9.19□□□□□ -0.94
LINC00299-204ENST00000454043 USP26Q9BXU7 913 aa9.19□□□□□ -0.94
LINC00299-204ENST00000454043 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.19□□□□□ -0.94
LINC00299-204ENST00000454043 ANO2Q9NQ90 1003 aa9.19□□□□□ -0.94
LINC00299-204ENST00000454043 PAG1Q9NWQ8 432 aa9.19□□□□□ -0.94
LINC00299-204ENST00000454043 ZNF609O15014 1411 aa9.19□□□□□ -0.94
LINC00299-204ENST00000454043 RGPD3A6NKT7 1758 aaPredicted RBP9.18□□□□□ -0.94
LINC00299-204ENST00000454043 POLRMTO00411 1230 aaKnown RBP9.18□□□□□ -0.94
LINC00299-204ENST00000454043 SGSM2O43147 1006 aa9.18□□□□□ -0.94
LINC00299-204ENST00000454043 MYH3P11055 1940 aa9.18□□□□□ -0.94
LINC00299-204ENST00000454043 HOXB4P17483 251 aaPredicted RBP9.18□□□□□ -0.94
LINC00299-204ENST00000454043 FGFR2P21802 821 aa9.18□□□□□ -0.94
LINC00299-204ENST00000454043 IGFBP4P22692 258 aa9.18□□□□□ -0.94
LINC00299-204ENST00000454043 ALDH1B1P30837 517 aa9.18□□□□□ -0.94
LINC00299-204ENST00000454043 ANAPC15P60006 121 aa9.18□□□□□ -0.94
LINC00299-204ENST00000454043 FKBP4Q02790 459 aaKnown RBP eCLIP9.18□□□□□ -0.94
LINC00299-204ENST00000454043 GRAPQ13588 217 aa9.18□□□□□ -0.94
LINC00299-204ENST00000454043 CWC27Q6UX04 472 aaKnown RBP9.18□□□□□ -0.94
LINC00299-204ENST00000454043 RGPD4Q7Z3J3 1758 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms