RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 USP17L13C9JLJ4 530 aa15.79■□□□□ 0.12
LINC00399-201ENST00000439008 USP17L11C9JVI0 530 aa15.79■□□□□ 0.12
LINC00399-201ENST00000439008 USP17L18D6R9N7 530 aa15.79■□□□□ 0.12
LINC00399-201ENST00000439008 USP17L22D6RA61 530 aa15.79■□□□□ 0.12
LINC00399-201ENST00000439008 USP17L17D6RBQ6 530 aa15.79■□□□□ 0.12
LINC00399-201ENST00000439008 USP17L19D6RCP7 530 aa15.79■□□□□ 0.12
LINC00399-201ENST00000439008 USP17L20D6RJB6 530 aa15.79■□□□□ 0.12
LINC00399-201ENST00000439008 NMT2O60551 498 aa15.79■□□□□ 0.12
LINC00399-201ENST00000439008 GCLCP48506 637 aaPredicted RBP15.79■□□□□ 0.12
LINC00399-201ENST00000439008 TFAP4Q01664 338 aa15.79■□□□□ 0.12
LINC00399-201ENST00000439008 USP17L24Q0WX57 530 aa15.79■□□□□ 0.12
LINC00399-201ENST00000439008 PABPC4Q13310 644 aaKnown RBP eCLIP15.79■□□□□ 0.12
LINC00399-201ENST00000439008 NEDD1Q8NHV4 660 aa15.79■□□□□ 0.12
LINC00399-201ENST00000439008 IL17RBQ9NRM6 502 aa15.79■□□□□ 0.12
LINC00399-201ENST00000439008 MTMR4Q9NYA4 1195 aa15.79■□□□□ 0.12
LINC00399-201ENST00000439008 KIAA0100Q14667 2235 aaKnown RBP15.78■□□□□ 0.12
LINC00399-201ENST00000439008 A0A0G2JMZ2 1700 aa15.78■□□□□ 0.12
LINC00399-201ENST00000439008 SPDYE16A6NNV3 312 aaPredicted RBP15.78■□□□□ 0.12
LINC00399-201ENST00000439008 PTH1RQ03431 593 aa15.78■□□□□ 0.12
LINC00399-201ENST00000439008 ZNF444Q8N0Y2 327 aaPredicted RBP15.78■□□□□ 0.12
LINC00399-201ENST00000439008 ARHGEF10LQ9HCE6 1279 aa15.78■□□□□ 0.12
LINC00399-201ENST00000439008 BTBD7Q9P203 1132 aa15.78■□□□□ 0.12
LINC00399-201ENST00000439008 NYAP2Q9P242 653 aa15.78■□□□□ 0.12
LINC00399-201ENST00000439008 CLIP2Q9UDT6 1046 aa15.78■□□□□ 0.12
LINC00399-201ENST00000439008 SRRDQ9UH36 339 aa15.78■□□□□ 0.12
LINC00399-201ENST00000439008 COL11A1P12107 1806 aaPredicted RBP15.78■□□□□ 0.12
LINC00399-201ENST00000439008 HIP1O00291 1037 aa15.77■□□□□ 0.12
LINC00399-201ENST00000439008 ORC4O43929 436 aa15.77■□□□□ 0.12
LINC00399-201ENST00000439008 FMNL1O95466 1100 aaPredicted RBP15.77■□□□□ 0.12
LINC00399-201ENST00000439008 PRKCZQ05513 592 aa15.77■□□□□ 0.12
LINC00399-201ENST00000439008 PDE4BQ07343 736 aa15.77■□□□□ 0.12
LINC00399-201ENST00000439008 KIF22Q14807 665 aa15.77■□□□□ 0.12
LINC00399-201ENST00000439008 CCDC136Q96JN2 1154 aa15.77■□□□□ 0.12
LINC00399-201ENST00000439008 NUP88Q99567 741 aaPredicted RBP15.77■□□□□ 0.12
LINC00399-201ENST00000439008 PAGR1Q9BTK6 254 aa15.77■□□□□ 0.12
LINC00399-201ENST00000439008 PORCNQ9H237 461 aa15.77■□□□□ 0.12
LINC00399-201ENST00000439008 FBXO28Q9NVF7 368 aa15.77■□□□□ 0.12
LINC00399-201ENST00000439008 MKI67P46013 3256 aaKnown RBP15.77■□□□□ 0.11
LINC00399-201ENST00000439008 TNRC18O15417 2968 aaPredicted RBP15.77■□□□□ 0.11
LINC00399-201ENST00000439008 NEDD4P46934 1319 aa15.76■□□□□ 0.11
LINC00399-201ENST00000439008 TSPY3P0CV98 308 aa15.76■□□□□ 0.11
LINC00399-201ENST00000439008 TSPY8P0CW00 308 aa15.76■□□□□ 0.11
LINC00399-201ENST00000439008 ERVK-9P63128 1117 aa15.76■□□□□ 0.11
LINC00399-201ENST00000439008 ERVK-24P63145 666 aa15.76■□□□□ 0.11
LINC00399-201ENST00000439008 LBX2Q6XYB7 198 aa15.76■□□□□ 0.11
LINC00399-201ENST00000439008 RASGRP2Q7LDG7 609 aa15.76■□□□□ 0.11
LINC00399-201ENST00000439008 MKL1Q969V6 931 aa15.76■□□□□ 0.11
LINC00399-201ENST00000439008 DSCC1Q9BVC3 393 aa15.76■□□□□ 0.11
LINC00399-201ENST00000439008 TAF6LQ9Y6J9 622 aa15.76■□□□□ 0.11
LINC00399-201ENST00000439008 MYPNQ86TC9 1320 aa15.75■□□□□ 0.11
LINC00399-201ENST00000439008 F5H6K3 240 aa15.75■□□□□ 0.11
LINC00399-201ENST00000439008 SGSM2O43147 1006 aa15.75■□□□□ 0.11
LINC00399-201ENST00000439008 RANBP6O60518 1105 aaKnown RBP15.75■□□□□ 0.11
LINC00399-201ENST00000439008 NDUFB10O96000 172 aa15.75■□□□□ 0.11
LINC00399-201ENST00000439008 NOVP48745 357 aa15.75■□□□□ 0.11
LINC00399-201ENST00000439008 FCGRTP55899 365 aa15.75■□□□□ 0.11
LINC00399-201ENST00000439008 KLRC3Q07444 240 aa15.75■□□□□ 0.11
LINC00399-201ENST00000439008 FAM83BQ5T0W9 1011 aa15.75■□□□□ 0.11
LINC00399-201ENST00000439008 LRRC47Q8N1G4 583 aaKnown RBP15.75■□□□□ 0.11
LINC00399-201ENST00000439008 SH3TC2Q8TF17 1288 aa15.75■□□□□ 0.11
LINC00399-201ENST00000439008 LPAR1Q92633 364 aa15.75■□□□□ 0.11
LINC00399-201ENST00000439008 ATG4CQ96DT6 458 aa15.75■□□□□ 0.11
LINC00399-201ENST00000439008 TANGO6Q9C0B7 1094 aa15.75■□□□□ 0.11
LINC00399-201ENST00000439008 ZNF287Q9HBT7 754 aa15.75■□□□□ 0.11
LINC00399-201ENST00000439008 GJD2Q9UKL4 321 aa15.75■□□□□ 0.11
LINC00399-201ENST00000439008 WDR46O15213 610 aaKnown RBP15.74■□□□□ 0.11
LINC00399-201ENST00000439008 GNRH1P01148 92 aa15.74■□□□□ 0.11
LINC00399-201ENST00000439008 SLC3A2P08195 630 aaKnown RBP15.74■□□□□ 0.11
LINC00399-201ENST00000439008 DSG3P32926 999 aa15.74■□□□□ 0.11
LINC00399-201ENST00000439008 FLT3LGP49771 235 aa15.74■□□□□ 0.11
LINC00399-201ENST00000439008 MFAP1P55081 439 aaKnown RBP15.74■□□□□ 0.11
LINC00399-201ENST00000439008 SOX10P56693 466 aa15.74■□□□□ 0.11
LINC00399-201ENST00000439008 COG2Q14746 738 aa15.74■□□□□ 0.11
LINC00399-201ENST00000439008 RRP12Q5JTH9 1297 aaKnown RBP15.74■□□□□ 0.11
LINC00399-201ENST00000439008 AKNAD1Q5T1N1 836 aa15.74■□□□□ 0.11
LINC00399-201ENST00000439008 GPRC5AQ8NFJ5 357 aa15.74■□□□□ 0.11
LINC00399-201ENST00000439008 STAG1Q8WVM7 1258 aa15.74■□□□□ 0.11
LINC00399-201ENST00000439008 ARMC5Q96C12 935 aa15.74■□□□□ 0.11
LINC00399-201ENST00000439008 CHMP4CQ96CF2 233 aa15.74■□□□□ 0.11
LINC00399-201ENST00000439008 SH2D4AQ9H788 454 aa15.74■□□□□ 0.11
LINC00399-201ENST00000439008 RABGAP1Q9Y3P9 1069 aa15.74■□□□□ 0.11
LINC00399-201ENST00000439008 TSPY2A6NKD2 308 aa15.73■□□□□ 0.11
LINC00399-201ENST00000439008 TNPO2O14787 897 aaKnown RBP15.73■□□□□ 0.11
LINC00399-201ENST00000439008 RAD21O60216 631 aa15.73■□□□□ 0.11
LINC00399-201ENST00000439008 TTLL1O95922 423 aa15.73■□□□□ 0.11
LINC00399-201ENST00000439008 ARHGEF6Q15052 776 aa15.73■□□□□ 0.11
LINC00399-201ENST00000439008 RCSD1Q6JBY9 416 aa15.73■□□□□ 0.11
LINC00399-201ENST00000439008 ZNF333Q96JL9 665 aa15.73■□□□□ 0.11
LINC00399-201ENST00000439008 GOPCQ9HD26 462 aa15.73■□□□□ 0.11
LINC00399-201ENST00000439008 ADAMTS5Q9UNA0 930 aa15.73■□□□□ 0.11
LINC00399-201ENST00000439008 RAD50Q92878 1312 aa15.72■□□□□ 0.11
LINC00399-201ENST00000439008 FLOT1O75955 427 aa15.72■□□□□ 0.11
LINC00399-201ENST00000439008 NEFLP07196 543 aa15.72■□□□□ 0.11
LINC00399-201ENST00000439008 ELNP15502 786 aa15.72■□□□□ 0.11
LINC00399-201ENST00000439008 BMP2KLQ5H9B9 411 aa15.72■□□□□ 0.11
LINC00399-201ENST00000439008 SAMD1Q6SPF0 538 aaPredicted RBP15.72■□□□□ 0.11
LINC00399-201ENST00000439008 TOMM22Q9NS69 142 aa15.72■□□□□ 0.11
LINC00399-201ENST00000439008 POTEFA5A3E0 1075 aa15.71■□□□□ 0.11
LINC00399-201ENST00000439008 ZNF213O14771 459 aa15.71■□□□□ 0.11
LINC00399-201ENST00000439008 MYCP01106 439 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms