RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 FOXO4P98177 505 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 FPGSQ05932 587 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 TTLL4Q14679 1199 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 HACE1Q8IYU2 909 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 FZD1Q9UP38 647 aa5.36□□□□□ -1.55
UBE4A-202ENST00000431736 ASTN2O75129 1339 aaPredicted RBP5.36□□□□□ -1.55
UBE4A-202ENST00000431736 LY75O60449 1722 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 TMEM232C9JQI7 657 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 SNAP23O00161 211 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 DLL1O00548 723 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 CYP2E1P05181 493 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-202ENST00000431736 NOL9Q5SY16 702 aaKnown RBP5.35□□□□□ -1.55
UBE4A-202ENST00000431736 FAM43AQ8N2R8 423 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 PRPF38AQ8NAV1 312 aaKnown RBP5.35□□□□□ -1.55
UBE4A-202ENST00000431736 SH3RF3Q8TEJ3 882 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-202ENST00000431736 U3KPZ7 1027 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-202ENST00000431736 APBB1IPQ7Z5R6 666 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-202ENST00000431736 SHCBP1Q8NEM2 672 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 CHST13Q8NET6 341 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 ZNF532Q9HCE3 1301 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 DDX20Q9UHI6 824 aaKnown RBP5.35□□□□□ -1.55
UBE4A-202ENST00000431736 SLC4A7Q9Y6M7 1214 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 SPDYE3A6NKU9 549 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 FAM196BA6NMK8 535 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 TTLL1O95922 423 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 PARP1P09874 1014 aaKnown RBP5.35□□□□□ -1.55
UBE4A-202ENST00000431736 MYCLP12524 364 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-202ENST00000431736 HMG20BQ9P0W2 317 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 PFASO15067 1338 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 AK9Q5TCS8 1911 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 CASTP20810 708 aaKnown RBP5.35□□□□□ -1.55
UBE4A-202ENST00000431736 IDI2Q9BXS1 227 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 CCDC171Q6TFL3 1326 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 A0A0U1RQG5 324 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-202ENST00000431736 IGF2BP3O00425 579 aaKnown RBP eCLIP5.35□□□□□ -1.55
UBE4A-202ENST00000431736 ADORA1P30542 326 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 RUFY4Q6ZNE9 571 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 GPCPD1Q9NPB8 672 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 MRVI1Q9Y6F6 885 aa5.35□□□□□ -1.55
UBE4A-202ENST00000431736 RGPD2P0DJD1 1756 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 GPR75-ASB3A0A0A6YYF3 556 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 H0YGN5 161 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 EFCAB14O75071 495 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 KLRK1P26718 216 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 RTP1P59025 263 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.34□□□□□ -1.55
UBE4A-202ENST00000431736 GPR142Q7Z601 462 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 OR6J1Q8NGC5 347 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 ARMC5Q96C12 935 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 EVI5LQ96CN4 794 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 DRC1Q96MC2 740 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 RPAP1Q9BWH6 1393 aaPredicted RBP5.34□□□□□ -1.55
UBE4A-202ENST00000431736 BACH1O14867 736 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 HOXC6P09630 235 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 TRIM22Q8IYM9 498 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 PANK1Q8TE04 598 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 APPBP2Q92624 585 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 FAM161BQ96MY7 647 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 UPF3BQ9BZI7 483 aaKnown RBP5.34□□□□□ -1.55
UBE4A-202ENST00000431736 TBC1D12O60347 775 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 TNFAIP2Q03169 654 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 SEPT2Q15019 361 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 TXNRD3Q86VQ6 643 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 PPP1R12CQ9BZL4 782 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 USP44Q9H0E7 712 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 SAMM50Q9Y512 469 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 SALL1Q9NSC2 1324 aa5.34□□□□□ -1.55
UBE4A-202ENST00000431736 A0A1W2PPC1 479 aa5.34□□□□□ -1.56
UBE4A-202ENST00000431736 FGBP02675 491 aa5.34□□□□□ -1.56
UBE4A-202ENST00000431736 PDE6AP16499 860 aa5.34□□□□□ -1.56
UBE4A-202ENST00000431736 IRF5Q13568 498 aa5.34□□□□□ -1.56
UBE4A-202ENST00000431736 SAFBQ15424 915 aaKnown RBP eCLIP5.34□□□□□ -1.56
UBE4A-202ENST00000431736 IFIT1BQ5T764 474 aaKnown RBP5.34□□□□□ -1.56
UBE4A-202ENST00000431736 CCDC136Q96JN2 1154 aa5.34□□□□□ -1.56
UBE4A-202ENST00000431736 AAASQ9NRG9 546 aa5.34□□□□□ -1.56
UBE4A-202ENST00000431736 SNCAIPQ9Y6H5 919 aa5.34□□□□□ -1.56
UBE4A-202ENST00000431736 UBR3Q6ZT12 1888 aa5.34□□□□□ -1.56
UBE4A-202ENST00000431736 USP54Q70EL1 1684 aa5.34□□□□□ -1.56
UBE4A-202ENST00000431736 CCDC196A0A1B0GTZ2 297 aa5.34□□□□□ -1.56
UBE4A-202ENST00000431736 ERCC3P19447 782 aa5.34□□□□□ -1.56
UBE4A-202ENST00000431736 AXDND1Q5T1B0 1012 aaPredicted RBP5.34□□□□□ -1.56
UBE4A-202ENST00000431736 P2RX7Q99572 595 aaKnown RBP5.34□□□□□ -1.56
UBE4A-202ENST00000431736 GLT8D2Q9H1C3 349 aa5.34□□□□□ -1.56
UBE4A-202ENST00000431736 RNF146Q9NTX7 359 aa5.34□□□□□ -1.56
UBE4A-202ENST00000431736 PUF60Q9UHX1 559 aaKnown RBP5.34□□□□□ -1.56
UBE4A-202ENST00000431736 A0A0G2JLL6 359 aaPredicted RBP5.33□□□□□ -1.56
UBE4A-202ENST00000431736 DYNC1LI2O43237 492 aaPredicted RBP5.33□□□□□ -1.56
UBE4A-202ENST00000431736 KCNV1Q6PIU1 500 aa5.33□□□□□ -1.56
UBE4A-202ENST00000431736 PRRT2Q7Z6L0 340 aaPredicted RBP5.33□□□□□ -1.56
UBE4A-202ENST00000431736 HOMER1Q86YM7 354 aa5.33□□□□□ -1.56
UBE4A-202ENST00000431736 TDHQ8IZJ6 230 aa5.33□□□□□ -1.56
UBE4A-202ENST00000431736 GLG1Q92896 1179 aa5.33□□□□□ -1.56
UBE4A-202ENST00000431736 FAM193BQ96PV7 902 aaPredicted RBP5.33□□□□□ -1.56
UBE4A-202ENST00000431736 WDR18Q9BV38 432 aa5.33□□□□□ -1.56
UBE4A-202ENST00000431736 ANO2Q9NQ90 1003 aa5.33□□□□□ -1.56
UBE4A-202ENST00000431736 SCN4AP35499 1836 aa5.33□□□□□ -1.56
UBE4A-202ENST00000431736 UTYO14607 1347 aa5.33□□□□□ -1.56
UBE4A-202ENST00000431736 TMEM265A0A087WTH1 108 aa5.33□□□□□ -1.56
UBE4A-202ENST00000431736 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.33□□□□□ -1.56
UBE4A-202ENST00000431736 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms