RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 VCPKMTQ9H867 229 aa21.31■■□□□ 1
CDC42EP1-203ENST00000430687 EMILIN3Q9NT22 766 aa21.31■■□□□ 1
CDC42EP1-203ENST00000430687 ERICH2A1L162 156 aa21.3■■□□□ 1
CDC42EP1-203ENST00000430687 TOP1P11387 765 aaKnown RBP21.3■■□□□ 1
CDC42EP1-203ENST00000430687 RCSD1Q6JBY9 416 aa21.3■■□□□ 1
CDC42EP1-203ENST00000430687 DHX32Q7L7V1 743 aaKnown RBP21.3■■□□□ 1
CDC42EP1-203ENST00000430687 IFNL1Q8IU54 200 aa21.3■■□□□ 1
CDC42EP1-203ENST00000430687 GMCL1P1Q8NEA9 526 aa21.3■■□□□ 1
CDC42EP1-203ENST00000430687 TMEM87BQ96K49 555 aa21.3■■□□□ 1
CDC42EP1-203ENST00000430687 ZKSCAN3Q9BRR0 538 aa21.3■■□□□ 1
CDC42EP1-203ENST00000430687 TM6SF1Q9BZW5 370 aa21.3■■□□□ 1
CDC42EP1-203ENST00000430687 AGTPBP1Q9UPW5 1226 aa21.3■■□□□ 1
CDC42EP1-203ENST00000430687 SLC45A1Q9Y2W3 748 aa21.3■■□□□ 1
CDC42EP1-203ENST00000430687 TNKSO95271 1327 aa21.29■■□□□ 1
CDC42EP1-203ENST00000430687 PRC1O43663 620 aa21.29■■□□□ 1
CDC42EP1-203ENST00000430687 ALDH1A1P00352 501 aa21.29■■□□□ 1
CDC42EP1-203ENST00000430687 ANTXR2P58335 489 aa21.29■■□□□ 1
CDC42EP1-203ENST00000430687 MAP2K1Q02750 393 aaPredicted RBP21.29■■□□□ 1
CDC42EP1-203ENST00000430687 PABPC4Q13310 644 aaKnown RBP eCLIP21.29■■□□□ 1
CDC42EP1-203ENST00000430687 SEC23AQ15436 765 aa21.29■■□□□ 1
CDC42EP1-203ENST00000430687 GPAT2Q6NUI2 795 aa21.29■■□□□ 1
CDC42EP1-203ENST00000430687 GADL1Q6ZQY3 521 aa21.29■■□□□ 1
CDC42EP1-203ENST00000430687 ENAHQ8N8S7 591 aaPredicted RBP21.29■■□□□ 1
CDC42EP1-203ENST00000430687 JAKMIP1Q96N16 626 aaKnown RBP21.29■■□□□ 1
CDC42EP1-203ENST00000430687 PTPN18Q99952 460 aa21.29■■□□□ 1
CDC42EP1-203ENST00000430687 F5H6K3 240 aa21.28■■□□□ 1
CDC42EP1-203ENST00000430687 IFIT3O14879 490 aaKnown RBP21.28■■□□□ 1
CDC42EP1-203ENST00000430687 HOXA7P31268 230 aaPredicted RBP21.28■■□□□ 1
CDC42EP1-203ENST00000430687 EXOSC10Q01780 885 aaKnown RBP21.28■■□□□ 1
CDC42EP1-203ENST00000430687 KLRC3Q07444 240 aa21.28■■□□□ 1
CDC42EP1-203ENST00000430687 ZYXQ15942 572 aaKnown RBP21.28■■□□□ 1
CDC42EP1-203ENST00000430687 BLOC1S2Q6QNY1 142 aa21.28■■□□□ 1
CDC42EP1-203ENST00000430687 TMTC2Q8N394 836 aa21.28■■□□□ 1
CDC42EP1-203ENST00000430687 JMYQ8N9B5 988 aa21.28■■□□□ 1
CDC42EP1-203ENST00000430687 IGDCC4Q8TDY8 1250 aa21.28■■□□□ 1
CDC42EP1-203ENST00000430687 TMEM47Q9BQJ4 181 aa21.28■■□□□ 1
CDC42EP1-203ENST00000430687 BTBD19C9JJ37 291 aa21.27■■□□□ 1
CDC42EP1-203ENST00000430687 IFIT1BQ5T764 474 aaKnown RBP21.27■■□□□ 1
CDC42EP1-203ENST00000430687 ZSWIM6Q9HCJ5 1215 aa21.27■■□□□ 1
CDC42EP1-203ENST00000430687 IGF2BP3O00425 579 aaKnown RBP eCLIP21.26■□□□□ 0.99
CDC42EP1-203ENST00000430687 WDR46O15213 610 aaKnown RBP21.26■□□□□ 0.99
CDC42EP1-203ENST00000430687 VCAM1P19320 739 aa21.26■□□□□ 0.99
CDC42EP1-203ENST00000430687 RBM25P49756 843 aaKnown RBP21.26■□□□□ 0.99
CDC42EP1-203ENST00000430687 WTAPQ15007 396 aa21.26■□□□□ 0.99
CDC42EP1-203ENST00000430687 TMEM67Q5HYA8 995 aa21.26■□□□□ 0.99
CDC42EP1-203ENST00000430687 CHST3Q7LGC8 479 aa21.26■□□□□ 0.99
CDC42EP1-203ENST00000430687 LRRC47Q8N1G4 583 aaKnown RBP21.26■□□□□ 0.99
CDC42EP1-203ENST00000430687 FAM43AQ8N2R8 423 aa21.26■□□□□ 0.99
CDC42EP1-203ENST00000430687 C22orf23Q9BZE7 217 aa21.26■□□□□ 0.99
CDC42EP1-203ENST00000430687 KAT14Q9H8E8 782 aa21.26■□□□□ 0.99
CDC42EP1-203ENST00000430687 USP17L15C9J2P7 530 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 USP17L13C9JLJ4 530 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 USP17L11C9JVI0 530 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 USP17L18D6R9N7 530 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 USP17L22D6RA61 530 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 USP17L17D6RBQ6 530 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 USP17L19D6RCP7 530 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 USP17L20D6RJB6 530 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 PDHXO00330 501 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 CASTP20810 708 aaKnown RBP21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 LIFRP42702 1097 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 USP17L24Q0WX57 530 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 DGKZQ13574 1117 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 TREML2Q5T2D2 321 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 RUFY3Q7L099 469 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 FBXL16Q8N461 479 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 GMCL1Q96IK5 515 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 PNMA3Q9UL41 463 aa21.25■□□□□ 0.99
CDC42EP1-203ENST00000430687 SH2B2O14492 632 aaPredicted RBP21.24■□□□□ 0.99
CDC42EP1-203ENST00000430687 NDUFB10O96000 172 aa21.24■□□□□ 0.99
CDC42EP1-203ENST00000430687 OSBPP22059 807 aa21.24■□□□□ 0.99
CDC42EP1-203ENST00000430687 RPS6KB1P23443 525 aa21.24■□□□□ 0.99
CDC42EP1-203ENST00000430687 KIAA1755Q5JYT7 1200 aa21.24■□□□□ 0.99
CDC42EP1-203ENST00000430687 SLFN13Q68D06 897 aa21.24■□□□□ 0.99
CDC42EP1-203ENST00000430687 PNMA1Q8ND90 353 aa21.24■□□□□ 0.99
CDC42EP1-203ENST00000430687 CFHR5Q9BXR6 569 aa21.24■□□□□ 0.99
CDC42EP1-203ENST00000430687 SAGE1Q9NXZ1 904 aa21.24■□□□□ 0.99
CDC42EP1-203ENST00000430687 CYP46A1Q9Y6A2 500 aa21.24■□□□□ 0.99
CDC42EP1-203ENST00000430687 LOC285556D6RIA3 1793 aa21.23■□□□□ 0.99
CDC42EP1-203ENST00000430687 CA12O43570 354 aa21.23■□□□□ 0.99
CDC42EP1-203ENST00000430687 COL9A3Q14050 684 aaPredicted RBP21.23■□□□□ 0.99
CDC42EP1-203ENST00000430687 CATSPERGQ6ZRH7 1159 aa21.23■□□□□ 0.99
CDC42EP1-203ENST00000430687 SPICE1Q8N0Z3 855 aa21.23■□□□□ 0.99
CDC42EP1-203ENST00000430687 DCAF4Q8WV16 495 aa21.23■□□□□ 0.99
CDC42EP1-203ENST00000430687 BEGAINQ9BUH8 593 aa21.23■□□□□ 0.99
CDC42EP1-203ENST00000430687 RPAP3Q9H6T3 665 aaPredicted RBP21.23■□□□□ 0.99
CDC42EP1-203ENST00000430687 LY9Q9HBG7 655 aa21.23■□□□□ 0.99
CDC42EP1-203ENST00000430687 WBP1LQ9NX94 342 aa21.23■□□□□ 0.99
CDC42EP1-203ENST00000430687 PTPRFP10586 1907 aa21.22■□□□□ 0.99
CDC42EP1-203ENST00000430687 RAD21O60216 631 aa21.22■□□□□ 0.99
CDC42EP1-203ENST00000430687 SNHG28P0DPA3 235 aa21.22■□□□□ 0.99
CDC42EP1-203ENST00000430687 SGMS1Q86VZ5 419 aa21.22■□□□□ 0.99
CDC42EP1-203ENST00000430687 PARK7Q99497 189 aaKnown RBP21.22■□□□□ 0.99
CDC42EP1-203ENST00000430687 RNF186Q9NXI6 227 aa21.22■□□□□ 0.99
CDC42EP1-203ENST00000430687 BMP3P12645 472 aa21.21■□□□□ 0.99
CDC42EP1-203ENST00000430687 SLC1A4P43007 532 aa21.21■□□□□ 0.99
CDC42EP1-203ENST00000430687 IL27Q8NEV9 243 aa21.21■□□□□ 0.99
CDC42EP1-203ENST00000430687 AGXT2Q9BYV1 514 aa21.21■□□□□ 0.99
CDC42EP1-203ENST00000430687 ASCC2Q9H1I8 757 aaPredicted RBP21.21■□□□□ 0.99
CDC42EP1-203ENST00000430687 ZFYVE28Q9HCC9 887 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms