RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 BLZF1Q9H2G9 400 aa16.99■□□□□ 0.31
SHISA9-201ENST00000423335 USP27XA6NNY8 438 aa16.98■□□□□ 0.31
SHISA9-201ENST00000423335 CUTAO60888 179 aa16.98■□□□□ 0.31
SHISA9-201ENST00000423335 R3HDM1Q15032 1099 aaKnown RBP16.98■□□□□ 0.31
SHISA9-201ENST00000423335 CEP112Q8N8E3 955 aa16.98■□□□□ 0.31
SHISA9-201ENST00000423335 LEMD3Q9Y2U8 911 aa16.98■□□□□ 0.31
SHISA9-201ENST00000423335 MACROD2A1Z1Q3 448 aa16.98■□□□□ 0.31
SHISA9-201ENST00000423335 VGLL3A8MV65 326 aa16.98■□□□□ 0.31
SHISA9-201ENST00000423335 KRT2P35908 639 aa16.98■□□□□ 0.31
SHISA9-201ENST00000423335 CCDC40Q4G0X9 1142 aa16.98■□□□□ 0.31
SHISA9-201ENST00000423335 NEK11Q8NG66 645 aa16.98■□□□□ 0.31
SHISA9-201ENST00000423335 KAZALD1Q96I82 304 aa16.98■□□□□ 0.31
SHISA9-201ENST00000423335 GPR108Q9NPR9 543 aa16.98■□□□□ 0.31
SHISA9-201ENST00000423335 PSMA7O14818 248 aa16.98■□□□□ 0.31
SHISA9-201ENST00000423335 NOP2P46087 812 aaKnown RBP16.98■□□□□ 0.31
SHISA9-201ENST00000423335 NCBP1Q09161 790 aaKnown RBP16.98■□□□□ 0.31
SHISA9-201ENST00000423335 IQUBQ8NA54 791 aa16.98■□□□□ 0.31
SHISA9-201ENST00000423335 PSMB7Q99436 277 aa16.98■□□□□ 0.31
SHISA9-201ENST00000423335 TAB2Q9NYJ8 693 aa16.98■□□□□ 0.31
SHISA9-201ENST00000423335 LUC7L2Q9Y383 392 aaKnown RBP16.98■□□□□ 0.31
SHISA9-201ENST00000423335 A0A0G2JLW4 131 aa16.97■□□□□ 0.31
SHISA9-201ENST00000423335 TUBB4AP04350 444 aa16.97■□□□□ 0.31
SHISA9-201ENST00000423335 CYP2D6P10635 497 aa16.97■□□□□ 0.31
SHISA9-201ENST00000423335 RNF187Q5TA31 235 aaPredicted RBP16.97■□□□□ 0.31
SHISA9-201ENST00000423335 SLF1Q9BQI6 1058 aa16.97■□□□□ 0.31
SHISA9-201ENST00000423335 NCOA3Q9Y6Q9 1424 aa16.97■□□□□ 0.31
SHISA9-201ENST00000423335 SLIT1O75093 1534 aa16.97■□□□□ 0.31
SHISA9-201ENST00000423335 TMCO5BA8MYB1 307 aa16.97■□□□□ 0.31
SHISA9-201ENST00000423335 SEC31AO94979 1220 aaKnown RBP16.97■□□□□ 0.31
SHISA9-201ENST00000423335 KRT9P35527 623 aa16.97■□□□□ 0.31
SHISA9-201ENST00000423335 SPAG1Q07617 926 aa16.97■□□□□ 0.31
SHISA9-201ENST00000423335 CCDC122Q5T0U0 273 aa16.97■□□□□ 0.31
SHISA9-201ENST00000423335 EXOC1Q9NV70 894 aa16.97■□□□□ 0.31
SHISA9-201ENST00000423335 OAS2P29728 719 aaKnown RBP16.97■□□□□ 0.31
SHISA9-201ENST00000423335 SPECC1LQ69YQ0 1117 aa16.97■□□□□ 0.31
SHISA9-201ENST00000423335 MIGA2Q7L4E1 593 aa16.97■□□□□ 0.31
SHISA9-201ENST00000423335 RAB34Q9BZG1 259 aa16.97■□□□□ 0.31
SHISA9-201ENST00000423335 KCNF1Q9H3M0 494 aa16.97■□□□□ 0.31
SHISA9-201ENST00000423335 DMTNQ08495 405 aa16.96■□□□□ 0.31
SHISA9-201ENST00000423335 GRAMD1CQ8IYS0 662 aa16.96■□□□□ 0.31
SHISA9-201ENST00000423335 CARMIL3Q8ND23 1372 aa16.96■□□□□ 0.31
SHISA9-201ENST00000423335 CMA1P23946 247 aa16.96■□□□□ 0.31
SHISA9-201ENST00000423335 TRIM28Q13263 835 aaKnown RBP16.96■□□□□ 0.31
SHISA9-201ENST00000423335 EZH2Q15910 746 aaKnown RBP16.96■□□□□ 0.31
SHISA9-201ENST00000423335 LINC00301Q8NCQ3 95 aa16.96■□□□□ 0.31
SHISA9-201ENST00000423335 SLC44A5Q8NCS7 719 aa16.96■□□□□ 0.31
SHISA9-201ENST00000423335 PPP1R13BQ96KQ4 1090 aa16.96■□□□□ 0.31
SHISA9-201ENST00000423335 CCDC113Q9H0I3 377 aa16.96■□□□□ 0.31
SHISA9-201ENST00000423335 RTL9Q8NET4 1388 aa16.96■□□□□ 0.31
SHISA9-201ENST00000423335 RPAP1Q9BWH6 1393 aaPredicted RBP16.96■□□□□ 0.31
SHISA9-201ENST00000423335 CYLC1P35663 651 aaPredicted RBP16.96■□□□□ 0.31
SHISA9-201ENST00000423335 PNMA1Q8ND90 353 aa16.96■□□□□ 0.31
SHISA9-201ENST00000423335 CALML4Q96GE6 196 aa16.96■□□□□ 0.31
SHISA9-201ENST00000423335 CCDC42Q96M95 316 aa16.96■□□□□ 0.31
SHISA9-201ENST00000423335 C6orf50Q9HD87 102 aa16.96■□□□□ 0.31
SHISA9-201ENST00000423335 GDF11O95390 407 aa16.95■□□□□ 0.3
SHISA9-201ENST00000423335 PRR5LQ6MZQ0 368 aa16.95■□□□□ 0.3
SHISA9-201ENST00000423335 INTS5Q6P9B9 1019 aaKnown RBP16.95■□□□□ 0.3
SHISA9-201ENST00000423335 MLKLQ8NB16 471 aa16.95■□□□□ 0.3
SHISA9-201ENST00000423335 GPKOWQ92917 476 aaPredicted RBP eCLIP16.95■□□□□ 0.3
SHISA9-201ENST00000423335 RIPOR2Q9Y4F9 1068 aa16.95■□□□□ 0.3
SHISA9-201ENST00000423335 SPDYE3A6NKU9 549 aa16.95■□□□□ 0.3
SHISA9-201ENST00000423335 CNGA4Q8IV77 575 aa16.95■□□□□ 0.3
SHISA9-201ENST00000423335 DEXIO95424 95 aa16.95■□□□□ 0.3
SHISA9-201ENST00000423335 NKX1-1Q15270 411 aaPredicted RBP16.95■□□□□ 0.3
SHISA9-201ENST00000423335 FBXO38Q6PIJ6 1188 aa16.95■□□□□ 0.3
SHISA9-201ENST00000423335 TTLL6Q8N841 843 aa16.95■□□□□ 0.3
SHISA9-201ENST00000423335 ZNF277Q9NRM2 450 aaPredicted RBP16.95■□□□□ 0.3
SHISA9-201ENST00000423335 RTEL1Q9NZ71 1219 aa16.95■□□□□ 0.3
SHISA9-201ENST00000423335 ZSWIM5Q9P217 1185 aa16.95■□□□□ 0.3
SHISA9-201ENST00000423335 PPP2R2CQ9Y2T4 447 aa16.95■□□□□ 0.3
SHISA9-201ENST00000423335 UBN2Q6ZU65 1347 aa16.94■□□□□ 0.3
SHISA9-201ENST00000423335 KIF5AQ12840 1032 aa16.94■□□□□ 0.3
SHISA9-201ENST00000423335 SYCP1Q15431 976 aa16.94■□□□□ 0.3
SHISA9-201ENST00000423335 SCLT1Q96NL6 688 aa16.94■□□□□ 0.3
SHISA9-201ENST00000423335 CPVLQ9H3G5 476 aa16.94■□□□□ 0.3
SHISA9-201ENST00000423335 RMND1Q9NWS8 449 aa16.94■□□□□ 0.3
SHISA9-201ENST00000423335 SYNRGQ9UMZ2 1314 aa16.94■□□□□ 0.3
SHISA9-201ENST00000423335 PRPF4BQ13523 1007 aaKnown RBP16.94■□□□□ 0.3
SHISA9-201ENST00000423335 BARGINQ6ZT62 677 aa16.94■□□□□ 0.3
SHISA9-201ENST00000423335 MAATS1Q7Z4T9 603 aa16.94■□□□□ 0.3
SHISA9-201ENST00000423335 ZNF34Q8IZ26 560 aa16.94■□□□□ 0.3
SHISA9-201ENST00000423335 H7C1D1 291 aa16.94■□□□□ 0.3
SHISA9-201ENST00000423335 SMC1AQ14683 1233 aaKnown RBP16.94■□□□□ 0.3
SHISA9-201ENST00000423335 GOLPH3LQ9H4A5 285 aa16.94■□□□□ 0.3
SHISA9-201ENST00000423335 CPDO75976 1380 aa16.94■□□□□ 0.3
SHISA9-201ENST00000423335 KRT86O43790 486 aa16.93■□□□□ 0.3
SHISA9-201ENST00000423335 BMP15O95972 392 aa16.93■□□□□ 0.3
SHISA9-201ENST00000423335 MCM3P25205 808 aa16.93■□□□□ 0.3
SHISA9-201ENST00000423335 TNIP1Q15025 636 aa16.93■□□□□ 0.3
SHISA9-201ENST00000423335 AOC3Q16853 763 aa16.93■□□□□ 0.3
SHISA9-201ENST00000423335 CCDC174Q6PII3 467 aa16.93■□□□□ 0.3
SHISA9-201ENST00000423335 NSMFQ6X4W1 530 aa16.93■□□□□ 0.3
SHISA9-201ENST00000423335 FAM84BQ96KN1 310 aaPredicted RBP16.93■□□□□ 0.3
SHISA9-201ENST00000423335 ALS2CR12Q96Q35 445 aa16.93■□□□□ 0.3
SHISA9-201ENST00000423335 SLC4A9Q96Q91 983 aa16.93■□□□□ 0.3
SHISA9-201ENST00000423335 MXD3Q9BW11 206 aa16.93■□□□□ 0.3
SHISA9-201ENST00000423335 CD209Q9NNX6 404 aa16.93■□□□□ 0.3
SHISA9-201ENST00000423335 KDM6AO15550 1401 aaPredicted RBP16.93■□□□□ 0.3
SHISA9-201ENST00000423335 ATP2C2O75185 946 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms