RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 ARPP21Q9UBL0 812 aaPredicted RBP21.43■■□□□ 1.02
CPNE1-210ENST00000416778 RPTORQ8N122 1335 aa21.43■■□□□ 1.02
CPNE1-210ENST00000416778 EEF2P13639 858 aaKnown RBP21.42■■□□□ 1.02
CPNE1-210ENST00000416778 MX1P20591 662 aa21.42■■□□□ 1.02
CPNE1-210ENST00000416778 ICA1Q05084 483 aa21.42■■□□□ 1.02
CPNE1-210ENST00000416778 LRRFIP1Q32MZ4 808 aaKnown RBP21.42■■□□□ 1.02
CPNE1-210ENST00000416778 MAP3K21Q5TCX8 1036 aa21.42■■□□□ 1.02
CPNE1-210ENST00000416778 NAV1Q8NEY1 1877 aa21.42■■□□□ 1.02
CPNE1-210ENST00000416778 LPAR1Q92633 364 aa21.42■■□□□ 1.02
CPNE1-210ENST00000416778 GCC1Q96CN9 775 aa21.42■■□□□ 1.02
CPNE1-210ENST00000416778 SEC62Q99442 399 aaKnown RBP21.42■■□□□ 1.02
CPNE1-210ENST00000416778 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.42■■□□□ 1.026e-9■□□□□ 10.4
CPNE1-210ENST00000416778 VCPKMTQ9H867 229 aa21.42■■□□□ 1.02
CPNE1-210ENST00000416778 ARHGEF10LQ9HCE6 1279 aa21.42■■□□□ 1.02
CPNE1-210ENST00000416778 HMX1Q9NP08 348 aaPredicted RBP21.42■■□□□ 1.02
CPNE1-210ENST00000416778 MINDY4BA8MYZ0 360 aa21.41■■□□□ 1.02
CPNE1-210ENST00000416778 SLC34A2O95436 690 aa21.41■■□□□ 1.02
CPNE1-210ENST00000416778 GNAT2P19087 354 aa21.41■■□□□ 1.02
CPNE1-210ENST00000416778 DSG3P32926 999 aa21.41■■□□□ 1.02
CPNE1-210ENST00000416778 TRMT44Q8IYL2 757 aaKnown RBP21.41■■□□□ 1.02
CPNE1-210ENST00000416778 EPB41L4AQ9HCS5 686 aaPredicted RBP21.41■■□□□ 1.02
CPNE1-210ENST00000416778 STAP2Q9UGK3 403 aa21.41■■□□□ 1.02
CPNE1-210ENST00000416778 RASA1P20936 1047 aa21.4■■□□□ 1.02
CPNE1-210ENST00000416778 PTPREP23469 700 aa21.4■■□□□ 1.02
CPNE1-210ENST00000416778 RGS2P41220 211 aa21.4■■□□□ 1.02
CPNE1-210ENST00000416778 MAP2K5Q13163 448 aa21.4■■□□□ 1.02
CPNE1-210ENST00000416778 AAMPQ13685 434 aa21.4■■□□□ 1.02
CPNE1-210ENST00000416778 ZMYM1Q5SVZ6 1142 aa21.4■■□□□ 1.02
CPNE1-210ENST00000416778 IFNL3Q8IZI9 196 aa21.4■■□□□ 1.02
CPNE1-210ENST00000416778 SPICE1Q8N0Z3 855 aa21.4■■□□□ 1.02
CPNE1-210ENST00000416778 BAZ2AQ9UIF9 1905 aaKnown RBP21.39■■□□□ 1.02
CPNE1-210ENST00000416778 SLC15A5A6NIM6 579 aa21.39■■□□□ 1.01
CPNE1-210ENST00000416778 FARP2O94887 1054 aaPredicted RBP21.39■■□□□ 1.01
CPNE1-210ENST00000416778 APPP05067 770 aa21.39■■□□□ 1.01
CPNE1-210ENST00000416778 CACNB2Q08289 660 aaPredicted RBP21.39■■□□□ 1.01
CPNE1-210ENST00000416778 CCL14Q16627 93 aa21.39■■□□□ 1.01
CPNE1-210ENST00000416778 STK11IPQ8N1F8 1099 aa21.39■■□□□ 1.01
CPNE1-210ENST00000416778 DPF3Q92784 378 aa21.39■■□□□ 1.01
CPNE1-210ENST00000416778 TANGO6Q9C0B7 1094 aa21.39■■□□□ 1.01
CPNE1-210ENST00000416778 SH2D4AQ9H788 454 aa21.39■■□□□ 1.01
CPNE1-210ENST00000416778 MKNK2Q9HBH9 465 aa21.39■■□□□ 1.01
CPNE1-210ENST00000416778 PLXNB2O15031 1838 aa21.39■■□□□ 1.01
CPNE1-210ENST00000416778 H0YGN5 161 aa21.38■■□□□ 1.01
CPNE1-210ENST00000416778 FSD1Q9BTV5 496 aa21.38■■□□□ 1.01
CPNE1-210ENST00000416778 MOV10L1Q9BXT6 1211 aaKnown RBP21.38■■□□□ 1.01
CPNE1-210ENST00000416778 ZBTB47Q9UFB7 747 aaPredicted RBP21.38■■□□□ 1.01
CPNE1-210ENST00000416778 ADAMTS5Q9UNA0 930 aa21.38■■□□□ 1.01
CPNE1-210ENST00000416778 WDR46O15213 610 aaKnown RBP21.37■■□□□ 1.01
CPNE1-210ENST00000416778 PRKAR2AP13861 404 aaKnown RBP21.37■■□□□ 1.01
CPNE1-210ENST00000416778 PDE1AP54750 535 aa21.37■■□□□ 1.01
CPNE1-210ENST00000416778 ATP2B2Q01814 1243 aa21.37■■□□□ 1.01
CPNE1-210ENST00000416778 SPATC1LQ9H0A9 340 aa21.37■■□□□ 1.01
CPNE1-210ENST00000416778 CWC22Q9HCG8 908 aaKnown RBP21.37■■□□□ 1.01
CPNE1-210ENST00000416778 CEP290O15078 2479 aa21.36■■□□□ 1.01
CPNE1-210ENST00000416778 MYH7P12883 1935 aa21.36■■□□□ 1.01
CPNE1-210ENST00000416778 STRNO43815 780 aa21.36■■□□□ 1.01
CPNE1-210ENST00000416778 FLOT1O75955 427 aa21.36■■□□□ 1.01
CPNE1-210ENST00000416778 HOXC6P09630 235 aa21.36■■□□□ 1.01
CPNE1-210ENST00000416778 ZKSCAN1P17029 563 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-210ENST00000416778 TDO2P48775 406 aa21.36■■□□□ 1.01
CPNE1-210ENST00000416778 GRB14Q14449 540 aa21.36■■□□□ 1.01
CPNE1-210ENST00000416778 WDR78Q5VTH9 848 aa21.36■■□□□ 1.01
CPNE1-210ENST00000416778 MB21D1Q8N884 522 aa21.36■■□□□ 1.01
CPNE1-210ENST00000416778 PAWRQ96IZ0 340 aaKnown RBP21.36■■□□□ 1.01
CPNE1-210ENST00000416778 APBA2Q99767 749 aa21.36■■□□□ 1.01
CPNE1-210ENST00000416778 HTATIP2Q9BUP3 242 aa21.36■■□□□ 1.01
CPNE1-210ENST00000416778 FLRT1Q9NZU1 646 aa21.36■■□□□ 1.01
CPNE1-210ENST00000416778 NYAP2Q9P242 653 aa21.36■■□□□ 1.01
CPNE1-210ENST00000416778 IGKV6D-41A0A0C4DH26 115 aa21.35■■□□□ 1.01
CPNE1-210ENST00000416778 IGHA2P01877 340 aa21.35■■□□□ 1.01
CPNE1-210ENST00000416778 MNX1P50219 401 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-210ENST00000416778 ZNF444Q8N0Y2 327 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-210ENST00000416778 SHCBP1Q8NEM2 672 aa21.35■■□□□ 1.01
CPNE1-210ENST00000416778 EVI5LQ96CN4 794 aa21.35■■□□□ 1.01
CPNE1-210ENST00000416778 ATG4CQ96DT6 458 aa21.35■■□□□ 1.01
CPNE1-210ENST00000416778 NACAP1Q9BZK3 213 aa21.35■■□□□ 1.01
CPNE1-210ENST00000416778 RWDD1Q9H446 243 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-210ENST00000416778 OGDHLQ9ULD0 1010 aa21.35■■□□□ 1.01
CPNE1-210ENST00000416778 ROBO3Q96MS0 1386 aa21.35■■□□□ 1.01
CPNE1-210ENST00000416778 IGHDP01880 384 aa21.34■■□□□ 1.01
CPNE1-210ENST00000416778 ERCC3P19447 782 aa21.34■■□□□ 1.01
CPNE1-210ENST00000416778 HABP4Q5JVS0 413 aaKnown RBP21.34■■□□□ 1.01
CPNE1-210ENST00000416778 LHX8Q68G74 356 aa21.34■■□□□ 1.01
CPNE1-210ENST00000416778 SMC5Q8IY18 1101 aa21.34■■□□□ 1.01
CPNE1-210ENST00000416778 ANKLE1Q8NAG6 615 aa21.34■■□□□ 1.01
CPNE1-210ENST00000416778 NPLOC4Q8TAT6 608 aa21.34■■□□□ 1.01
CPNE1-210ENST00000416778 MKL1Q969V6 931 aa21.34■■□□□ 1.01
CPNE1-210ENST00000416778 GOPCQ9HD26 462 aa21.34■■□□□ 1.01
CPNE1-210ENST00000416778 IVNS1ABPQ9Y6Y0 642 aa21.34■■□□□ 1.01
CPNE1-210ENST00000416778 FOXP2O15409 715 aa21.33■■□□□ 1.01
CPNE1-210ENST00000416778 PRDM1O75626 825 aa21.33■■□□□ 1.01
CPNE1-210ENST00000416778 CCND3P30281 292 aaPredicted RBP21.33■■□□□ 1.01
CPNE1-210ENST00000416778 TMEM132BQ14DG7 1078 aa21.33■■□□□ 1.01
CPNE1-210ENST00000416778 NECAB2Q7Z6G3 386 aa21.33■■□□□ 1.01
CPNE1-210ENST00000416778 DIS3LQ8TF46 1054 aaKnown RBP21.33■■□□□ 1.01
CPNE1-210ENST00000416778 ZNF287Q9HBT7 754 aa21.33■■□□□ 1.01
CPNE1-210ENST00000416778 FBXO28Q9NVF7 368 aa21.33■■□□□ 1.01
CPNE1-210ENST00000416778 CLIP2Q9UDT6 1046 aa21.33■■□□□ 1.01
CPNE1-210ENST00000416778 F5H6K3 240 aa21.32■■□□□ 1
CPNE1-210ENST00000416778 KLRC3Q07444 240 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms