RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 ELP3Q9H9T3 547 aa17.85■□□□□ 0.45
AP1S3-204ENST00000409375 TMX2Q9Y320 296 aa17.85■□□□□ 0.45
AP1S3-204ENST00000409375 ZHX2Q9Y6X8 837 aa17.85■□□□□ 0.45
AP1S3-204ENST00000409375 SPDYE5A6NIY4 337 aa17.84■□□□□ 0.45
AP1S3-204ENST00000409375 C19orf81C9J6K1 198 aa17.84■□□□□ 0.45
AP1S3-204ENST00000409375 USP17L10C9JJH3 530 aa17.84■□□□□ 0.45
AP1S3-204ENST00000409375 K7ELQ4 463 aaPredicted RBP17.84■□□□□ 0.45
AP1S3-204ENST00000409375 CD2BP2O95400 341 aaKnown RBP17.84■□□□□ 0.45
AP1S3-204ENST00000409375 SHROOM1Q2M3G4 852 aaPredicted RBP17.84■□□□□ 0.45
AP1S3-204ENST00000409375 CPLX2Q6PUV4 134 aaKnown RBP17.84■□□□□ 0.45
AP1S3-204ENST00000409375 MOB2Q70IA6 237 aa17.84■□□□□ 0.45
AP1S3-204ENST00000409375 MICU3Q86XE3 530 aa17.84■□□□□ 0.45
AP1S3-204ENST00000409375 GMCL1P1Q8NEA9 526 aa17.84■□□□□ 0.45
AP1S3-204ENST00000409375 KIAA1683Q9H0B3 1180 aa17.84■□□□□ 0.45
AP1S3-204ENST00000409375 SLKQ9H2G2 1235 aaPredicted RBP17.84■□□□□ 0.45
AP1S3-204ENST00000409375 GPHNQ9NQX3 736 aaPredicted RBP17.84■□□□□ 0.45
AP1S3-204ENST00000409375 DAXXQ9UER7 740 aaPredicted RBP17.84■□□□□ 0.45
AP1S3-204ENST00000409375 TMEM88BA6NKF7 163 aa17.83■□□□□ 0.44
AP1S3-204ENST00000409375 GOLGA8AA7E2F4 631 aa17.83■□□□□ 0.44
AP1S3-204ENST00000409375 METAP2P50579 478 aaKnown RBP eCLIP17.83■□□□□ 0.44
AP1S3-204ENST00000409375 HUNKP57058 714 aa17.83■□□□□ 0.44
AP1S3-204ENST00000409375 CST9Q5W186 159 aa17.83■□□□□ 0.44
AP1S3-204ENST00000409375 LRRC47Q8N1G4 583 aaKnown RBP17.83■□□□□ 0.44
AP1S3-204ENST00000409375 NUP133Q8WUM0 1156 aa17.83■□□□□ 0.44
AP1S3-204ENST00000409375 LPAR1Q92633 364 aa17.83■□□□□ 0.44
AP1S3-204ENST00000409375 RBM28Q9NW13 759 aaKnown RBP17.83■□□□□ 0.44
AP1S3-204ENST00000409375 BRPF3Q9ULD4 1205 aa17.83■□□□□ 0.44
AP1S3-204ENST00000409375 TPCN1Q9ULQ1 816 aa17.83■□□□□ 0.44
AP1S3-204ENST00000409375 RAD21O60216 631 aa17.82■□□□□ 0.44
AP1S3-204ENST00000409375 PDIA3P30101 505 aaKnown RBP17.82■□□□□ 0.44
AP1S3-204ENST00000409375 GNAQP50148 359 aa17.82■□□□□ 0.44
AP1S3-204ENST00000409375 BACE1P56817 501 aa17.82■□□□□ 0.44
AP1S3-204ENST00000409375 SPP2Q13103 211 aa17.82■□□□□ 0.44
AP1S3-204ENST00000409375 PPIL2Q13356 520 aa17.82■□□□□ 0.44
AP1S3-204ENST00000409375 DCAF4Q8WV16 495 aa17.82■□□□□ 0.44
AP1S3-204ENST00000409375 CLMNQ96JQ2 1002 aa17.82■□□□□ 0.44
AP1S3-204ENST00000409375 VCPKMTQ9H867 229 aa17.82■□□□□ 0.44
AP1S3-204ENST00000409375 TMOD4Q9NZQ9 345 aa17.82■□□□□ 0.44
AP1S3-204ENST00000409375 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.82■□□□□ 0.44
AP1S3-204ENST00000409375 F5H6K3 240 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 CXCL11O14625 94 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 CPLX1O14810 134 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 PFKFB2O60825 505 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 HSP90AA1P07900 732 aaKnown RBP17.81■□□□□ 0.44
AP1S3-204ENST00000409375 KLRC3Q07444 240 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 TROAPQ12815 778 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 RTN1Q16799 776 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 ASPRV1Q53RT3 343 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 GPATCH4Q5T3I0 446 aaKnown RBP17.81■□□□□ 0.44
AP1S3-204ENST00000409375 SLFN13Q68D06 897 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 USP17L2Q6R6M4 530 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 SIAH1Q8IUQ4 282 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 OPTNQ96CV9 577 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 OTUD5Q96G74 571 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 GMCL1Q96IK5 515 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 LZTS2Q9BRK4 669 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 SENP2Q9HC62 589 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 AFG3L2Q9Y4W6 797 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 PHIPQ8WWQ0 1821 aa17.81■□□□□ 0.44
AP1S3-204ENST00000409375 NID2Q14112 1375 aa17.8■□□□□ 0.44
AP1S3-204ENST00000409375 TRIM75PA6NK02 468 aa17.8■□□□□ 0.44
AP1S3-204ENST00000409375 CDKL5O76039 1030 aa17.8■□□□□ 0.44
AP1S3-204ENST00000409375 PARP1P09874 1014 aaKnown RBP17.8■□□□□ 0.44
AP1S3-204ENST00000409375 ZBTB48P10074 688 aaPredicted RBP17.8■□□□□ 0.44
AP1S3-204ENST00000409375 ECE1P42892 770 aa17.8■□□□□ 0.44
AP1S3-204ENST00000409375 SLC1A4P43007 532 aa17.8■□□□□ 0.44
AP1S3-204ENST00000409375 STK3Q13188 491 aa17.8■□□□□ 0.44
AP1S3-204ENST00000409375 MTMR2Q13614 643 aa17.8■□□□□ 0.44
AP1S3-204ENST00000409375 ME3Q16798 604 aa17.8■□□□□ 0.44
AP1S3-204ENST00000409375 CCDC96Q2M329 555 aa17.8■□□□□ 0.44
AP1S3-204ENST00000409375 CCDC84Q86UT8 332 aaPredicted RBP17.8■□□□□ 0.44
AP1S3-204ENST00000409375 FANCBQ8NB91 859 aa17.8■□□□□ 0.44
AP1S3-204ENST00000409375 ACER1Q8TDN7 264 aa17.8■□□□□ 0.44
AP1S3-204ENST00000409375 TMX3Q96JJ7 454 aa17.8■□□□□ 0.44
AP1S3-204ENST00000409375 LARP6Q9BRS8 491 aaKnown RBP17.8■□□□□ 0.44
AP1S3-204ENST00000409375 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.8■□□□□ 0.44
AP1S3-204ENST00000409375 ISY1Q9ULR0 285 aaKnown RBP17.8■□□□□ 0.44
AP1S3-204ENST00000409375 ABT1Q9ULW3 272 aaKnown RBP17.8■□□□□ 0.44
AP1S3-204ENST00000409375 MTMR7Q9Y216 660 aa17.8■□□□□ 0.44
AP1S3-204ENST00000409375 TLL2Q9Y6L7 1015 aa17.8■□□□□ 0.44
AP1S3-204ENST00000409375 A0A1W2PRG0 241 aa17.79■□□□□ 0.44
AP1S3-204ENST00000409375 SNHG28P0DPA3 235 aa17.79■□□□□ 0.44
AP1S3-204ENST00000409375 PDHBP11177 359 aa17.79■□□□□ 0.44
AP1S3-204ENST00000409375 SNAPC2Q13487 334 aa17.79■□□□□ 0.44
AP1S3-204ENST00000409375 GRM4Q14833 912 aa17.79■□□□□ 0.44
AP1S3-204ENST00000409375 ZYXQ15942 572 aaKnown RBP17.79■□□□□ 0.44
AP1S3-204ENST00000409375 SAPCD2Q86UD0 394 aa17.79■□□□□ 0.44
AP1S3-204ENST00000409375 GTF3C6Q969F1 213 aa17.79■□□□□ 0.44
AP1S3-204ENST00000409375 HHIPL1Q96JK4 782 aa17.79■□□□□ 0.44
AP1S3-204ENST00000409375 MYL10Q9BUA6 226 aa17.79■□□□□ 0.44
AP1S3-204ENST00000409375 WDR46O15213 610 aaKnown RBP17.78■□□□□ 0.44
AP1S3-204ENST00000409375 NDUFB10O96000 172 aa17.78■□□□□ 0.44
AP1S3-204ENST00000409375 ZNF157P51786 506 aaPredicted RBP17.78■□□□□ 0.44
AP1S3-204ENST00000409375 SH3D19Q5HYK7 790 aa17.78■□□□□ 0.44
AP1S3-204ENST00000409375 RGMBQ6NW40 437 aa17.78■□□□□ 0.44
AP1S3-204ENST00000409375 FASTKD5Q7L8L6 764 aaKnown RBP17.78■□□□□ 0.44
AP1S3-204ENST00000409375 WNK4Q96J92 1243 aa17.78■□□□□ 0.44
AP1S3-204ENST00000409375 C12orf42Q96LP6 360 aa17.78■□□□□ 0.44
AP1S3-204ENST00000409375 KCNH4Q9UQ05 1017 aa17.78■□□□□ 0.44
AP1S3-204ENST00000409375 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms