RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 TMEM47Q9BQJ4 181 aa15.25■□□□□ 0.03
LIMS2-203ENST00000409254 COL11A1P12107 1806 aaPredicted RBP15.24■□□□□ 0.03
LIMS2-203ENST00000409254 KIF5BP33176 963 aa15.24■□□□□ 0.03
LIMS2-203ENST00000409254 BACE1P56817 501 aa15.24■□□□□ 0.03
LIMS2-203ENST00000409254 GPATCH4Q5T3I0 446 aaKnown RBP15.24■□□□□ 0.03
LIMS2-203ENST00000409254 SYNE3Q6ZMZ3 975 aa15.24■□□□□ 0.03
LIMS2-203ENST00000409254 SIAH1Q8IUQ4 282 aa15.24■□□□□ 0.03
LIMS2-203ENST00000409254 NKX2-3Q8TAU0 364 aa15.24■□□□□ 0.03
LIMS2-203ENST00000409254 BRF1Q92994 677 aa15.24■□□□□ 0.03
LIMS2-203ENST00000409254 CCDC102AQ96A19 550 aa15.24■□□□□ 0.03
LIMS2-203ENST00000409254 VCPKMTQ9H867 229 aa15.24■□□□□ 0.03
LIMS2-203ENST00000409254 ZCCHC17Q9NP64 241 aaKnown RBP15.24■□□□□ 0.03
LIMS2-203ENST00000409254 SLC12A7Q9Y666 1083 aa15.24■□□□□ 0.03
LIMS2-203ENST00000409254 A0A0G2JLL6 359 aaPredicted RBP15.23■□□□□ 0.03
LIMS2-203ENST00000409254 CCDC196A0A1B0GTZ2 297 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 RASSF10A6NK89 507 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 UBE2Q2LH0YL09 131 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 WDR46O15213 610 aaKnown RBP15.23■□□□□ 0.03
LIMS2-203ENST00000409254 NMT2O60551 498 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 PLA2G6O60733 806 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 AK2P54819 239 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 FMR1Q06787 632 aaKnown RBP eCLIP15.23■□□□□ 0.03
LIMS2-203ENST00000409254 TROAPQ12815 778 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 PRKG1Q13976 671 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 ASPRV1Q53RT3 343 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 RGMBQ6NW40 437 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 USP17L2Q6R6M4 530 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 PRRT2Q7Z6L0 340 aaPredicted RBP15.23■□□□□ 0.03
LIMS2-203ENST00000409254 REM2Q8IYK8 340 aaPredicted RBP15.23■□□□□ 0.03
LIMS2-203ENST00000409254 ZNF654Q8IZM8 581 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 OPTNQ96CV9 577 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 WNK4Q96J92 1243 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 FEZ1Q99689 392 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 RBM28Q9NW13 759 aaKnown RBP15.23■□□□□ 0.03
LIMS2-203ENST00000409254 CLIP2Q9UDT6 1046 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 LIMCH1Q9UPQ0 1083 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 ZHX2Q9Y6X8 837 aa15.23■□□□□ 0.03
LIMS2-203ENST00000409254 RBBP6Q7Z6E9 1792 aaKnown RBP15.23■□□□□ 0.03
LIMS2-203ENST00000409254 MYPNQ86TC9 1320 aa15.22■□□□□ 0.03
LIMS2-203ENST00000409254 ZBTB43O43298 467 aa15.22■□□□□ 0.03
LIMS2-203ENST00000409254 DHX16O60231 1041 aaKnown RBP15.22■□□□□ 0.03
LIMS2-203ENST00000409254 SLC10A3P09131 477 aa15.22■□□□□ 0.03
LIMS2-203ENST00000409254 CPA1P15085 419 aa15.22■□□□□ 0.03
LIMS2-203ENST00000409254 SMARCA1P28370 1054 aa15.22■□□□□ 0.03
LIMS2-203ENST00000409254 GNAQP50148 359 aa15.22■□□□□ 0.03
LIMS2-203ENST00000409254 GTF2A2P52657 109 aa15.22■□□□□ 0.03
LIMS2-203ENST00000409254 SNAPC2Q13487 334 aa15.22■□□□□ 0.03
LIMS2-203ENST00000409254 COL9A3Q14050 684 aaPredicted RBP15.22■□□□□ 0.03
LIMS2-203ENST00000409254 SHROOM1Q2M3G4 852 aaPredicted RBP15.22■□□□□ 0.03
LIMS2-203ENST00000409254 SPRYD7Q5W111 196 aa15.22■□□□□ 0.03
LIMS2-203ENST00000409254 NFXL1Q6ZNB6 911 aa15.22■□□□□ 0.03
LIMS2-203ENST00000409254 FASTKD5Q7L8L6 764 aaKnown RBP15.22■□□□□ 0.03
LIMS2-203ENST00000409254 CHST3Q7LGC8 479 aa15.22■□□□□ 0.03
LIMS2-203ENST00000409254 CLMNQ96JQ2 1002 aa15.22■□□□□ 0.03
LIMS2-203ENST00000409254 ZKSCAN3Q9BRR0 538 aa15.22■□□□□ 0.03
LIMS2-203ENST00000409254 ELP3Q9H9T3 547 aa15.22■□□□□ 0.03
LIMS2-203ENST00000409254 SLC45A1Q9Y2W3 748 aa15.22■□□□□ 0.03
LIMS2-203ENST00000409254 KLF18A0A0U1RQI7 1052 aa15.21■□□□□ 0.03
LIMS2-203ENST00000409254 A0A1W2PRG0 241 aa15.21■□□□□ 0.03
LIMS2-203ENST00000409254 PDHBP11177 359 aa15.21■□□□□ 0.03
LIMS2-203ENST00000409254 INHBEP58166 350 aa15.21■□□□□ 0.03
LIMS2-203ENST00000409254 SPP2Q13103 211 aa15.21■□□□□ 0.03
LIMS2-203ENST00000409254 MOB2Q70IA6 237 aa15.21■□□□□ 0.03
LIMS2-203ENST00000409254 RASAL3Q86YV0 1011 aa15.21■□□□□ 0.03
LIMS2-203ENST00000409254 CTCFLQ8NI51 663 aaPredicted RBP15.21■□□□□ 0.03
LIMS2-203ENST00000409254 OTUD5Q96G74 571 aa15.21■□□□□ 0.03
LIMS2-203ENST00000409254 LZTS2Q9BRK4 669 aa15.21■□□□□ 0.03
LIMS2-203ENST00000409254 FZD1Q9UP38 647 aa15.21■□□□□ 0.03
LIMS2-203ENST00000409254 TESPA1A2RU30 521 aaPredicted RBP15.2■□□□□ 0.02
LIMS2-203ENST00000409254 GOLGA8BA8MQT2 603 aa15.2■□□□□ 0.02
LIMS2-203ENST00000409254 F5H6K3 240 aa15.2■□□□□ 0.02
LIMS2-203ENST00000409254 IRF6O14896 467 aa15.2■□□□□ 0.02
LIMS2-203ENST00000409254 NDUFB10O96000 172 aa15.2■□□□□ 0.02
LIMS2-203ENST00000409254 FDX1P10109 184 aa15.2■□□□□ 0.02
LIMS2-203ENST00000409254 CETPP11597 493 aa15.2■□□□□ 0.02
LIMS2-203ENST00000409254 ECE1P42892 770 aa15.2■□□□□ 0.02
LIMS2-203ENST00000409254 KLRC3Q07444 240 aa15.2■□□□□ 0.02
LIMS2-203ENST00000409254 PABPC4Q13310 644 aaKnown RBP eCLIP15.2■□□□□ 0.02
LIMS2-203ENST00000409254 MTMR2Q13614 643 aa15.2■□□□□ 0.02
LIMS2-203ENST00000409254 GRM4Q14833 912 aa15.2■□□□□ 0.02
LIMS2-203ENST00000409254 ACER1Q8TDN7 264 aa15.2■□□□□ 0.02
LIMS2-203ENST00000409254 TCEANC2Q96MN5 208 aa15.2■□□□□ 0.02
LIMS2-203ENST00000409254 LRRC2Q9BYS8 371 aa15.2■□□□□ 0.02
LIMS2-203ENST00000409254 TMOD4Q9NZQ9 345 aa15.2■□□□□ 0.02
LIMS2-203ENST00000409254 RBM27Q9P2N5 1060 aaKnown RBP15.2■□□□□ 0.02
LIMS2-203ENST00000409254 ABT1Q9ULW3 272 aaKnown RBP15.2■□□□□ 0.02
LIMS2-203ENST00000409254 MANSC4A6NHS7 340 aaPredicted RBP15.19■□□□□ 0.02
LIMS2-203ENST00000409254 PFKFB2O60825 505 aa15.19■□□□□ 0.02
LIMS2-203ENST00000409254 PDIA3P30101 505 aaKnown RBP15.19■□□□□ 0.02
LIMS2-203ENST00000409254 HOXA7P31268 230 aaPredicted RBP15.19■□□□□ 0.02
LIMS2-203ENST00000409254 METAP2P50579 478 aaKnown RBP eCLIP15.19■□□□□ 0.02
LIMS2-203ENST00000409254 ZNF157P51786 506 aaPredicted RBP15.19■□□□□ 0.02
LIMS2-203ENST00000409254 ATP2B2Q01814 1243 aa15.19■□□□□ 0.02
LIMS2-203ENST00000409254 ZNF543Q08ER8 600 aa15.19■□□□□ 0.02
LIMS2-203ENST00000409254 NOGQ13253 232 aa15.19■□□□□ 0.02
LIMS2-203ENST00000409254 CPLX2Q6PUV4 134 aaKnown RBP15.19■□□□□ 0.02
LIMS2-203ENST00000409254 BTNL9Q6UXG8 535 aa15.19■□□□□ 0.02
LIMS2-203ENST00000409254 FAM160B2Q86V87 743 aa15.19■□□□□ 0.02
LIMS2-203ENST00000409254 CLEC10AQ8IUN9 316 aa15.19■□□□□ 0.02
LIMS2-203ENST00000409254 LRRC47Q8N1G4 583 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms