RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 OSBPL1AQ9BXW6 950 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 PRKAG3Q9UGI9 489 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 GTF2IRD1Q9UHL9 959 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 TPX2Q9ULW0 747 aaKnown RBP3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 SLC12A7Q9Y666 1083 aa3.67□□□□□ -1.82
CBX3P9-201ENST00000402326 CADPSQ9ULU8 1353 aa3.66□□□□□ -1.82
CBX3P9-201ENST00000402326 A0A1W2PQH9 124 aa3.66□□□□□ -1.82
CBX3P9-201ENST00000402326 SMAD7O15105 426 aaKnown RBP3.66□□□□□ -1.82
CBX3P9-201ENST00000402326 KLF4O43474 513 aa3.66□□□□□ -1.82
CBX3P9-201ENST00000402326 HYAL3O43820 417 aaPredicted RBP3.66□□□□□ -1.82
CBX3P9-201ENST00000402326 ACRP10323 421 aa3.66□□□□□ -1.82
CBX3P9-201ENST00000402326 POLR2BP30876 1174 aaKnown RBP3.66□□□□□ -1.82
CBX3P9-201ENST00000402326 SOGA3Q5TF21 947 aa3.66□□□□□ -1.82
CBX3P9-201ENST00000402326 UNC5AQ6ZN44 842 aa3.66□□□□□ -1.82
CBX3P9-201ENST00000402326 TTC6Q86TZ1 520 aa3.66□□□□□ -1.82
CBX3P9-201ENST00000402326 NOP9Q86U38 636 aaKnown RBP3.66□□□□□ -1.82
CBX3P9-201ENST00000402326 DNAJB8Q8NHS0 232 aa3.66□□□□□ -1.82
CBX3P9-201ENST00000402326 DHRS1Q96LJ7 313 aa3.66□□□□□ -1.82
CBX3P9-201ENST00000402326 PRDM5Q9NQX1 630 aaPredicted RBP3.66□□□□□ -1.82
CBX3P9-201ENST00000402326 CDK11AQ9UQ88 783 aaPredicted RBP3.66□□□□□ -1.82
CBX3P9-201ENST00000402326 MAPK8IP1Q9UQF2 711 aa3.66□□□□□ -1.82
CBX3P9-201ENST00000402326 TLDC2A0PJX2 215 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 FAM86C2PA6NEL3 165 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 IGF2BP3O00425 579 aaKnown RBP eCLIP3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 CLEC3AO75596 197 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 UBOX5O94941 541 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 RNF4P78317 190 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 SERINC3Q13530 473 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 ZYXQ15942 572 aaKnown RBP3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 BBS9Q3SYG4 887 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 PRSS36Q5K4E3 855 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 SFRP5Q5T4F7 317 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 ARHGAP27Q6ZUM4 889 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 FAM214BQ7L5A3 538 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 ZDHHC13Q8IUH4 622 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 TMEM192Q8IY95 271 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 CELF2-AS1Q8N7Q2 184 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 HEXIM2Q96MH2 286 aaKnown RBP3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 KREMEN1Q96MU8 473 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 SLC6A18Q96N87 628 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 TRIM55Q9BYV6 548 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 TNKS2Q9H2K2 1166 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 PHAXQ9H814 394 aaKnown RBP3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 ST7Q9NRC1 585 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 ACTR10Q9NZ32 417 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 LEMD3Q9Y2U8 911 aa3.65□□□□□ -1.83
CBX3P9-201ENST00000402326 FAM221BA6H8Z2 402 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 PRR19A6NJB7 356 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 CCDC85CA6NKD9 419 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 GNAT3A8MTJ3 354 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 CYP26A1O43174 497 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 CBX7O95931 251 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 KIR3DL1P43629 444 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 RAB33AQ14088 237 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 FXNQ16595 210 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 ZNF662Q6ZS27 426 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 JAZF1Q86VZ6 243 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 RNF141Q8WVD5 230 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 VWCEQ96DN2 955 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 FBXL18Q96ME1 805 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 ASPNQ9BXN1 380 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 MKNK2Q9HBH9 465 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 LRRC4CQ9HCJ2 640 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 PIM2Q9P1W9 311 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 SUCOQ9UBS9 1254 aaKnown RBP3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 ZNF214Q9UL59 606 aaPredicted RBP3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 KCNH3Q9ULD8 1083 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 CNTNAP4Q9C0A0 1308 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 LTBP3Q9NS15 1303 aa3.64□□□□□ -1.83
CBX3P9-201ENST00000402326 U2SURPO15042 1029 aaKnown RBP3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 ZNF865P0CJ78 1059 aaPredicted RBP3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 FOSL1P15407 271 aa3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 GRIK1P39086 918 aa3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 PMS1P54277 932 aaKnown RBP3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 OXCT1P55809 520 aa3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 SLC7A5Q01650 507 aa3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 GNPTABQ3T906 1256 aa3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 NBPF12Q5TAG4 269 aaPredicted RBP3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 NBPF6Q5VWK0 638 aa3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 LARP1BQ659C4 914 aaKnown RBP3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 C22orf34Q6ZV56 151 aa3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 CCDC144CPQ8IYA2 1237 aa3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 NLGN1Q8N2Q7 840 aa3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 MICAL1Q8TDZ2 1067 aa3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 SMARCC1Q92922 1105 aaPredicted RBP3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 MRFAP1L1Q96HT8 127 aa3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 NBPF4Q96M43 638 aa3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 SRPK1Q96SB4 655 aaKnown RBP3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 MKRN2Q9H000 416 aaKnown RBP3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 SIRPGQ9P1W8 387 aa3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 TMA7Q9Y2S6 64 aaKnown RBP3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 TBX22Q9Y458 520 aa3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 MRPL42Q9Y6G3 142 aaKnown RBP3.63□□□□□ -1.83
CBX3P9-201ENST00000402326 PRR33A8MZF0 331 aa3.62□□□□□ -1.83
CBX3P9-201ENST00000402326 FAM155AB1AL88 458 aaPredicted RBP3.62□□□□□ -1.83
CBX3P9-201ENST00000402326 C9IYK1 514 aa3.62□□□□□ -1.83
CBX3P9-201ENST00000402326 PSPNO60542 156 aa3.62□□□□□ -1.83
CBX3P9-201ENST00000402326 LRRN2O75325 713 aa3.62□□□□□ -1.83
CBX3P9-201ENST00000402326 DDAH1O94760 285 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms