RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 RRAGBQ5VZM2 374 aa22.18■■□□□ 1.14
COL13A1-205ENST00000398978 SLC51AQ86UW1 340 aa22.18■■□□□ 1.14
COL13A1-205ENST00000398978 CTR9Q6PD62 1173 aa22.17■■□□□ 1.14
COL13A1-205ENST00000398978 TRIML1Q8N9V2 468 aa22.17■■□□□ 1.14
COL13A1-205ENST00000398978 ADD3Q9UEY8 706 aaKnown RBP22.17■■□□□ 1.14
COL13A1-205ENST00000398978 NID2Q14112 1375 aa22.17■■□□□ 1.14
COL13A1-205ENST00000398978 XDHP47989 1333 aa22.17■■□□□ 1.14
COL13A1-205ENST00000398978 MYO1BO43795 1136 aa22.17■■□□□ 1.14
COL13A1-205ENST00000398978 CCDC175P0C221 793 aa22.17■■□□□ 1.14
COL13A1-205ENST00000398978 IL17AQ16552 155 aa22.17■■□□□ 1.14
COL13A1-205ENST00000398978 CDC5LQ99459 802 aaKnown RBP22.17■■□□□ 1.14
COL13A1-205ENST00000398978 TAB2Q9NYJ8 693 aa22.17■■□□□ 1.14
COL13A1-205ENST00000398978 ABCA3Q99758 1704 aa22.17■■□□□ 1.14
COL13A1-205ENST00000398978 DOCK2Q92608 1830 aa22.17■■□□□ 1.14
COL13A1-205ENST00000398978 ERCC5P28715 1186 aaPredicted RBP22.17■■□□□ 1.14
COL13A1-205ENST00000398978 ZNF569Q5MCW4 686 aa22.17■■□□□ 1.14
COL13A1-205ENST00000398978 IQCA1Q86XH1 822 aa22.17■■□□□ 1.14
COL13A1-205ENST00000398978 MTRQ99707 1265 aa22.17■■□□□ 1.14
COL13A1-205ENST00000398978 SRRTQ9BXP5 876 aaKnown RBP22.17■■□□□ 1.14
COL13A1-205ENST00000398978 ADGRG1Q9Y653 693 aa22.17■■□□□ 1.14
COL13A1-205ENST00000398978 RTL9Q8NET4 1388 aa22.17■■□□□ 1.14
COL13A1-205ENST00000398978 LOC102724428A0A0B4J2F2 783 aa22.16■■□□□ 1.14
COL13A1-205ENST00000398978 ADAMTS2O95450 1211 aa22.16■■□□□ 1.14
COL13A1-205ENST00000398978 SIK1P57059 783 aa22.16■■□□□ 1.14
COL13A1-205ENST00000398978 ELOA2Q8IYF1 753 aaPredicted RBP22.16■■□□□ 1.14
COL13A1-205ENST00000398978 PRPF3O43395 683 aaKnown RBP22.16■■□□□ 1.14
COL13A1-205ENST00000398978 TBC1D8O95759 1140 aa22.16■■□□□ 1.14
COL13A1-205ENST00000398978 NLRP5P59047 1200 aa22.16■■□□□ 1.14
COL13A1-205ENST00000398978 CELF1Q92879 486 aaKnown RBP22.16■■□□□ 1.14
COL13A1-205ENST00000398978 GPKOWQ92917 476 aaPredicted RBP eCLIP22.16■■□□□ 1.14
COL13A1-205ENST00000398978 GYPCP04921 128 aa22.15■■□□□ 1.14
COL13A1-205ENST00000398978 CC2D1AQ6P1N0 951 aaPredicted RBP22.15■■□□□ 1.14
COL13A1-205ENST00000398978 SH3RF1Q7Z6J0 888 aa22.15■■□□□ 1.14
COL13A1-205ENST00000398978 GDAQ9Y2T3 454 aa22.15■■□□□ 1.14
COL13A1-205ENST00000398978 TIAM2Q8IVF5 1701 aa22.15■■□□□ 1.14
COL13A1-205ENST00000398978 TRERF1Q96PN7 1200 aa22.15■■□□□ 1.14
COL13A1-205ENST00000398978 PES1O00541 588 aaKnown RBP22.14■■□□□ 1.14
COL13A1-205ENST00000398978 N4BP3O15049 544 aa22.14■■□□□ 1.14
COL13A1-205ENST00000398978 TMTC3Q6ZXV5 915 aa22.14■■□□□ 1.14
COL13A1-205ENST00000398978 ANKRD18AQ8IVF6 992 aa22.14■■□□□ 1.14
COL13A1-205ENST00000398978 FAM84BQ96KN1 310 aaPredicted RBP22.14■■□□□ 1.14
COL13A1-205ENST00000398978 MYH8P13535 1937 aa22.14■■□□□ 1.13
COL13A1-205ENST00000398978 PP2D1A8MPX8 630 aa22.14■■□□□ 1.13
COL13A1-205ENST00000398978 KCNQ2O43526 872 aa22.14■■□□□ 1.13
COL13A1-205ENST00000398978 KRT31Q15323 416 aa22.14■■□□□ 1.13
COL13A1-205ENST00000398978 TFR2Q9UP52 801 aa22.14■■□□□ 1.13
COL13A1-205ENST00000398978 LRP5O75197 1615 aa22.14■■□□□ 1.13
COL13A1-205ENST00000398978 CICQ96RK0 1608 aaPredicted RBP22.14■■□□□ 1.13
COL13A1-205ENST00000398978 BCORQ6W2J9 1755 aa22.14■■□□□ 1.13
COL13A1-205ENST00000398978 MFAP3LO75121 409 aa22.13■■□□□ 1.13
COL13A1-205ENST00000398978 ST5P78524 1137 aa22.13■■□□□ 1.13
COL13A1-205ENST00000398978 CDKAL1Q5VV42 579 aa22.13■■□□□ 1.13
COL13A1-205ENST00000398978 CNTNAP5Q8WYK1 1306 aa22.13■■□□□ 1.13
COL13A1-205ENST00000398978 TRIM49BA6NDI0 452 aa22.13■■□□□ 1.13
COL13A1-205ENST00000398978 ZBTB22O15209 634 aa22.13■■□□□ 1.13
COL13A1-205ENST00000398978 PRDX5P30044 214 aa22.13■■□□□ 1.13
COL13A1-205ENST00000398978 RSRC2Q7L4I2 434 aaKnown RBP22.13■■□□□ 1.13
COL13A1-205ENST00000398978 NEK11Q8NG66 645 aa22.13■■□□□ 1.13
COL13A1-205ENST00000398978 TNFRSF25Q93038 417 aa22.13■■□□□ 1.13
COL13A1-205ENST00000398978 BRMS1Q9HCU9 246 aa22.13■■□□□ 1.13
COL13A1-205ENST00000398978 GOLGA6L9A6NEM1 432 aa22.12■■□□□ 1.13
COL13A1-205ENST00000398978 GTF2E1P29083 439 aaPredicted RBP22.12■■□□□ 1.13
COL13A1-205ENST00000398978 MYH13Q9UKX3 1938 aa22.12■■□□□ 1.13
COL13A1-205ENST00000398978 SLC35F6Q8N357 371 aa22.12■■□□□ 1.13
COL13A1-205ENST00000398978 CTCFLQ8NI51 663 aaPredicted RBP22.12■■□□□ 1.13
COL13A1-205ENST00000398978 SUGCTQ9HAC7 445 aa22.12■■□□□ 1.13
COL13A1-205ENST00000398978 GNL3LQ9NVN8 582 aaKnown RBP22.12■■□□□ 1.13
COL13A1-205ENST00000398978 ANAPC4Q9UJX5 808 aa22.12■■□□□ 1.13
COL13A1-205ENST00000398978 OAS2P29728 719 aaKnown RBP22.12■■□□□ 1.13
COL13A1-205ENST00000398978 PBX1P40424 430 aa22.12■■□□□ 1.13
COL13A1-205ENST00000398978 ERVK-24P63145 666 aa22.12■■□□□ 1.13
COL13A1-205ENST00000398978 KIF4BQ2VIQ3 1234 aa22.12■■□□□ 1.13
COL13A1-205ENST00000398978 CAVIN4Q5BKX8 364 aa22.12■■□□□ 1.13
COL13A1-205ENST00000398978 AK7Q96M32 723 aa22.12■■□□□ 1.13
COL13A1-205ENST00000398978 PANX2Q96RD6 677 aa22.12■■□□□ 1.13
COL13A1-205ENST00000398978 NUP88Q99567 741 aaPredicted RBP22.12■■□□□ 1.13
COL13A1-205ENST00000398978 TRIM10Q9UDY6 481 aa22.12■■□□□ 1.13
COL13A1-205ENST00000398978 MINPP1Q9UNW1 487 aa22.12■■□□□ 1.13
COL13A1-205ENST00000398978 MECOMQ03112 1051 aa22.11■■□□□ 1.13
COL13A1-205ENST00000398978 FILIP1LQ4L180 1135 aa22.11■■□□□ 1.13
COL13A1-205ENST00000398978 WWC2Q6AWC2 1192 aa22.11■■□□□ 1.13
COL13A1-205ENST00000398978 SLF1Q9BQI6 1058 aa22.11■■□□□ 1.13
COL13A1-205ENST00000398978 ARAP2Q8WZ64 1704 aa22.11■■□□□ 1.13
COL13A1-205ENST00000398978 MYH14Q7Z406 1995 aaKnown RBP22.11■■□□□ 1.13
COL13A1-205ENST00000398978 RHOXF2BP0C7M4 288 aa22.11■■□□□ 1.13
COL13A1-205ENST00000398978 PARP10Q53GL7 1025 aa22.11■■□□□ 1.13
COL13A1-205ENST00000398978 GPR161Q8N6U8 529 aaKnown RBP22.11■■□□□ 1.13
COL13A1-205ENST00000398978 GOLGA1Q92805 767 aa22.11■■□□□ 1.13
COL13A1-205ENST00000398978 FERMT2Q96AC1 680 aa22.11■■□□□ 1.13
COL13A1-205ENST00000398978 GSDMAQ96QA5 445 aa22.11■■□□□ 1.13
COL13A1-205ENST00000398978 RHOXF2Q9BQY4 288 aa22.11■■□□□ 1.13
COL13A1-205ENST00000398978 ATP2C1P98194 919 aaPredicted RBP22.1■■□□□ 1.13
COL13A1-205ENST00000398978 FAM205AQ6ZU69 1335 aa22.1■■□□□ 1.13
COL13A1-205ENST00000398978 DISP2A7MBM2 1401 aa22.1■■□□□ 1.13
COL13A1-205ENST00000398978 KIF5CO60282 957 aa22.1■■□□□ 1.13
COL13A1-205ENST00000398978 CHMP4BP1P59074 171 aa22.1■■□□□ 1.13
COL13A1-205ENST00000398978 NELFBQ8WX92 580 aa22.1■■□□□ 1.13
COL13A1-205ENST00000398978 RNF216Q9NWF9 866 aaPredicted RBP22.1■■□□□ 1.13
COL13A1-205ENST00000398978 TSPY2A6NKD2 308 aa22.1■■□□□ 1.13
COL13A1-205ENST00000398978 USP17L8P0C7I0 530 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms