RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ZNF397Q8NF99 534 aaPredicted RBP15.4■□□□□ 0.06
GTF2F1-201ENST00000394456 WASF1Q92558 559 aa15.4■□□□□ 0.06
GTF2F1-201ENST00000394456 IRX2Q9BZI1 471 aaPredicted RBP15.4■□□□□ 0.06
GTF2F1-201ENST00000394456 CCDC88AQ3V6T2 1871 aa15.4■□□□□ 0.06
GTF2F1-201ENST00000394456 USP17L12C9JPN9 530 aa15.39■□□□□ 0.05
GTF2F1-201ENST00000394456 USP17L21D6R901 530 aa15.39■□□□□ 0.05
GTF2F1-201ENST00000394456 NPY5RQ15761 445 aa15.39■□□□□ 0.05
GTF2F1-201ENST00000394456 CPLX3Q8WVH0 158 aa15.39■□□□□ 0.05
GTF2F1-201ENST00000394456 ZBTB9Q96C00 473 aa15.39■□□□□ 0.05
GTF2F1-201ENST00000394456 ZSCAN10Q96SZ4 725 aaPredicted RBP15.39■□□□□ 0.05
GTF2F1-201ENST00000394456 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.39■□□□□ 0.055e-7■■■■□ 20.2
GTF2F1-201ENST00000394456 NID2Q14112 1375 aa15.39■□□□□ 0.05
GTF2F1-201ENST00000394456 URI1O94763 535 aaPredicted RBP15.39■□□□□ 0.05
GTF2F1-201ENST00000394456 TBX2Q13207 712 aaPredicted RBP15.39■□□□□ 0.05
GTF2F1-201ENST00000394456 KARSQ15046 597 aaKnown RBP15.39■□□□□ 0.05
GTF2F1-201ENST00000394456 SYMPKQ92797 1274 aaKnown RBP15.39■□□□□ 0.05
GTF2F1-201ENST00000394456 GYS1P13807 737 aa15.38■□□□□ 0.05
GTF2F1-201ENST00000394456 CDC25AP30304 524 aa15.38■□□□□ 0.05
GTF2F1-201ENST00000394456 GRAPQ13588 217 aa15.38■□□□□ 0.05
GTF2F1-201ENST00000394456 CTR9Q6PD62 1173 aa15.38■□□□□ 0.05
GTF2F1-201ENST00000394456 GRAPLQ8TC17 118 aaPredicted RBP15.38■□□□□ 0.05
GTF2F1-201ENST00000394456 BLZF1Q9H2G9 400 aa15.38■□□□□ 0.05
GTF2F1-201ENST00000394456 PPP2R2CQ9Y2T4 447 aa15.38■□□□□ 0.05
GTF2F1-201ENST00000394456 CBFA2T2O43439 604 aa15.38■□□□□ 0.05
GTF2F1-201ENST00000394456 IFIT1BQ5T764 474 aaKnown RBP15.38■□□□□ 0.05
GTF2F1-201ENST00000394456 ESR2Q92731 530 aa15.38■□□□□ 0.05
GTF2F1-201ENST00000394456 CARD6Q9BX69 1037 aa15.38■□□□□ 0.05
GTF2F1-201ENST00000394456 SEMA3EO15041 775 aa15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 TROAPQ12815 778 aa15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 SRBD1Q8N5C6 995 aaKnown RBP15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 FEZ1Q99689 392 aa15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 PHF20Q9BVI0 1012 aa15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 RNF41Q9H4P4 317 aaPredicted RBP15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 TRIM75PA6NK02 468 aa15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 ARHGAP29Q52LW3 1261 aa15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 NT5DC1Q5TFE4 455 aa15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 PAGE5Q96GU1 130 aa15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 BAG1Q99933 345 aaPredicted RBP15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 SOWAHDA6NJG2 315 aa15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 APTXQ7Z2E3 356 aaKnown RBP15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 KRT27Q7Z3Y8 459 aa15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 RPGRQ92834 1020 aaKnown RBP15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 MTMR7Q9Y216 660 aa15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 PARP3Q9Y6F1 533 aa15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 MORC2Q9Y6X9 1032 aaPredicted RBP15.37■□□□□ 0.05
GTF2F1-201ENST00000394456 IRS2Q9Y4H2 1338 aa15.36■□□□□ 0.05
GTF2F1-201ENST00000394456 SERPINB2P05120 415 aa15.36■□□□□ 0.05
GTF2F1-201ENST00000394456 AKAP17AQ02040 695 aaKnown RBP15.36■□□□□ 0.05
GTF2F1-201ENST00000394456 IL17AQ16552 155 aa15.36■□□□□ 0.05
GTF2F1-201ENST00000394456 MRPL44Q9H9J2 332 aaKnown RBP15.36■□□□□ 0.05
GTF2F1-201ENST00000394456 MYH6P13533 1939 aa15.36■□□□□ 0.05
GTF2F1-201ENST00000394456 CCDC196A0A1B0GTZ2 297 aa15.36■□□□□ 0.05
GTF2F1-201ENST00000394456 TFRCP02786 760 aaKnown RBP15.36■□□□□ 0.05
GTF2F1-201ENST00000394456 ADRA2BP18089 450 aa15.36■□□□□ 0.05
GTF2F1-201ENST00000394456 KRT2P35908 639 aa15.36■□□□□ 0.05
GTF2F1-201ENST00000394456 CLCN6P51797 869 aa15.36■□□□□ 0.05
GTF2F1-201ENST00000394456 ENOX1Q8TC92 643 aaKnown RBP15.36■□□□□ 0.05
GTF2F1-201ENST00000394456 RASGRP4Q8TDF6 673 aa15.36■□□□□ 0.05
GTF2F1-201ENST00000394456 RNF26Q9BY78 433 aaPredicted RBP15.36■□□□□ 0.05
GTF2F1-201ENST00000394456 SEC31AO94979 1220 aaKnown RBP15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 SPECC1LQ69YQ0 1117 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 RASGRP2Q7LDG7 609 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 MLKLQ8NB16 471 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 RGS22Q8NE09 1264 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 MTRQ99707 1265 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 DUOX1Q9NRD9 1551 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 ABL1P00519 1130 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 KCNJ6P48051 423 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 PLCD1P51178 756 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 GNG11P61952 73 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 PTGDRQ13258 359 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 PIK3AP1Q6ZUJ8 805 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 DZIP1Q86YF9 867 aaKnown RBP15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 TMTC2Q8N394 836 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 SPATA20Q8TB22 786 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 TNFRSF25Q93038 417 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 BRIP1Q9BX63 1249 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 ANAPC4Q9UJX5 808 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 MAPK8IP1Q9UQF2 711 aa15.35■□□□□ 0.05
GTF2F1-201ENST00000394456 KIF2AO00139 706 aaPredicted RBP15.34■□□□□ 0.05
GTF2F1-201ENST00000394456 H2AFXP16104 143 aaPredicted RBP15.34■□□□□ 0.05
GTF2F1-201ENST00000394456 NR1I3Q14994 352 aa15.34■□□□□ 0.05
GTF2F1-201ENST00000394456 GRIK5Q16478 980 aa15.34■□□□□ 0.05
GTF2F1-201ENST00000394456 CATIPQ7Z7H3 387 aa15.34■□□□□ 0.05
GTF2F1-201ENST00000394456 ZNF579Q8NAF0 562 aaKnown RBP15.34■□□□□ 0.05
GTF2F1-201ENST00000394456 XDHP47989 1333 aa15.34■□□□□ 0.05
GTF2F1-201ENST00000394456 CNTNAP5Q8WYK1 1306 aa15.34■□□□□ 0.05
GTF2F1-201ENST00000394456 MCM7P33993 719 aa15.34■□□□□ 0.05
GTF2F1-201ENST00000394456 GPSM2P81274 684 aa15.34■□□□□ 0.05
GTF2F1-201ENST00000394456 DDR1Q08345 913 aa15.34■□□□□ 0.05
GTF2F1-201ENST00000394456 CUL4BQ13620 913 aa15.34■□□□□ 0.05
GTF2F1-201ENST00000394456 GPKOWQ92917 476 aaPredicted RBP eCLIP15.34■□□□□ 0.05
GTF2F1-201ENST00000394456 DCP1AQ9NPI6 582 aaPredicted RBP15.34■□□□□ 0.05
GTF2F1-201ENST00000394456 RNF225M0QZC1 329 aaPredicted RBP15.33■□□□□ 0.05
GTF2F1-201ENST00000394456 PRPF3O43395 683 aaKnown RBP15.33■□□□□ 0.05
GTF2F1-201ENST00000394456 NRDCO43847 1150 aa15.33■□□□□ 0.05
GTF2F1-201ENST00000394456 CCT6AP40227 531 aaKnown RBP15.33■□□□□ 0.05
GTF2F1-201ENST00000394456 ST5P78524 1137 aa15.33■□□□□ 0.05
GTF2F1-201ENST00000394456 RBL2Q08999 1139 aa15.33■□□□□ 0.05
GTF2F1-201ENST00000394456 DIXDC1Q155Q3 683 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms