RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 SLC15A5A6NIM6 579 aa13.34□□□□□ -0.27
VTI1BP2-201ENST00000394154 HOXC6P09630 235 aa13.34□□□□□ -0.27
VTI1BP2-201ENST00000394154 CYP2C19P33261 490 aa13.34□□□□□ -0.27
VTI1BP2-201ENST00000394154 SLF2Q8IX21 1173 aa13.34□□□□□ -0.27
VTI1BP2-201ENST00000394154 TRPV1Q8NER1 839 aa13.34□□□□□ -0.27
VTI1BP2-201ENST00000394154 PBX4Q9BYU1 374 aa13.34□□□□□ -0.27
VTI1BP2-201ENST00000394154 CHD9Q3L8U1 2897 aa13.34□□□□□ -0.27
VTI1BP2-201ENST00000394154 C19orf81C9J6K1 198 aa13.33□□□□□ -0.28
VTI1BP2-201ENST00000394154 IFIT2P09913 472 aaKnown RBP13.33□□□□□ -0.28
VTI1BP2-201ENST00000394154 PTPREP23469 700 aa13.33□□□□□ -0.28
VTI1BP2-201ENST00000394154 PBX2P40425 430 aa13.33□□□□□ -0.28
VTI1BP2-201ENST00000394154 MRE11P49959 708 aa13.33□□□□□ -0.28
VTI1BP2-201ENST00000394154 PDE1AP54750 535 aa13.33□□□□□ -0.28
VTI1BP2-201ENST00000394154 ZGPATQ8N5A5 531 aaKnown RBP13.33□□□□□ -0.28
VTI1BP2-201ENST00000394154 LPIN2Q92539 896 aa13.33□□□□□ -0.28
VTI1BP2-201ENST00000394154 OSBPL3Q9H4L5 887 aa13.33□□□□□ -0.28
VTI1BP2-201ENST00000394154 GNL3LQ9NVN8 582 aaKnown RBP13.33□□□□□ -0.28
VTI1BP2-201ENST00000394154 CEP126Q9P2H0 1117 aa13.33□□□□□ -0.28
VTI1BP2-201ENST00000394154 IVNS1ABPQ9Y6Y0 642 aa13.33□□□□□ -0.28
VTI1BP2-201ENST00000394154 REV3LO60673 3130 aa13.33□□□□□ -0.28
VTI1BP2-201ENST00000394154 SEPT4O43236 478 aa13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 MX1P20591 662 aa13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 KCNQ1P51787 676 aa13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 TFF2Q03403 129 aa13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 TFCP2Q12800 502 aa13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 LRRC41Q15345 812 aa13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 BMP2KLQ5H9B9 411 aa13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 WDR78Q5VTH9 848 aa13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 CCDC174Q6PII3 467 aa13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 ATG9AQ7Z3C6 839 aa13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 AACSQ86V21 672 aa13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 DZIP1Q86YF9 867 aaKnown RBP13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 OTUD7AQ8TE49 926 aaPredicted RBP13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 FERMT2Q96AC1 680 aa13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 FAM163AQ96GL9 167 aaPredicted RBP13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 GPATCH3Q96I76 525 aa13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 DENND2AQ9ULE3 1009 aa13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 RABGAP1Q9Y3P9 1069 aa13.32□□□□□ -0.28
VTI1BP2-201ENST00000394154 SEMA3EO15041 775 aa13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 IGHA2P01877 340 aa13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 ASNSP08243 561 aa13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 BTDP43251 543 aa13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 GRB14Q14449 540 aa13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 RRP1BQ14684 758 aaKnown RBP13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 RAB30Q15771 203 aa13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 TTC22Q5TAA0 569 aa13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 ANO1Q5XXA6 986 aa13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 NPLOC4Q8TAT6 608 aa13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 GPR108Q9NPR9 543 aa13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 C11orf16Q9NQ32 467 aa13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 TMEM39AQ9NV64 488 aa13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 HERC5Q9UII4 1024 aaKnown RBP13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 PHF24Q9UPV7 400 aa13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 NDUFB9Q9Y6M9 179 aa13.31□□□□□ -0.28
VTI1BP2-201ENST00000394154 USP17L10C9JJH3 530 aa13.3□□□□□ -0.28
VTI1BP2-201ENST00000394154 ERC2O15083 957 aa13.3□□□□□ -0.28
VTI1BP2-201ENST00000394154 PQBP1O60828 265 aaKnown RBP13.3□□□□□ -0.28
VTI1BP2-201ENST00000394154 OLFML2BQ68BL8 750 aa13.3□□□□□ -0.28
VTI1BP2-201ENST00000394154 BACH2Q9BYV9 841 aa13.3□□□□□ -0.28
VTI1BP2-201ENST00000394154 MSRAQ9UJ68 235 aa13.3□□□□□ -0.28
VTI1BP2-201ENST00000394154 AKAP2Q9Y2D5 859 aa13.3□□□□□ -0.28
VTI1BP2-201ENST00000394154 MROH7-TTC4A0A0A0MT08 1334 aa13.3□□□□□ -0.28
VTI1BP2-201ENST00000394154 SALL3Q9BXA9 1300 aa13.3□□□□□ -0.28
VTI1BP2-201ENST00000394154 ZNF236Q9UL36 1845 aa13.29□□□□□ -0.28
VTI1BP2-201ENST00000394154 CHD7Q9P2D1 2997 aa13.29□□□□□ -0.28
VTI1BP2-201ENST00000394154 FAM86C2PA6NEL3 165 aa13.29□□□□□ -0.28
VTI1BP2-201ENST00000394154 GRXCR1A8MXD5 290 aa13.29□□□□□ -0.28
VTI1BP2-201ENST00000394154 RHBDL3P58872 404 aa13.29□□□□□ -0.28
VTI1BP2-201ENST00000394154 TNNI3KQ59H18 835 aa13.29□□□□□ -0.28
VTI1BP2-201ENST00000394154 RASIP1Q5U651 963 aa13.29□□□□□ -0.28
VTI1BP2-201ENST00000394154 MICALL1Q8N3F8 863 aa13.29□□□□□ -0.28
VTI1BP2-201ENST00000394154 SLC44A5Q8NCS7 719 aa13.29□□□□□ -0.28
VTI1BP2-201ENST00000394154 EAF2Q96CJ1 260 aaPredicted RBP13.29□□□□□ -0.28
VTI1BP2-201ENST00000394154 FPGT-TNNI3KV9GXZ4 949 aa13.29□□□□□ -0.28
VTI1BP2-201ENST00000394154 TTC41PQ6P2S7 1318 aa13.29□□□□□ -0.28
VTI1BP2-201ENST00000394154 LRRC37A2A6NM11 1700 aa13.28□□□□□ -0.28
VTI1BP2-201ENST00000394154 SMIM22K7EJ46 135 aa13.28□□□□□ -0.28
VTI1BP2-201ENST00000394154 CNMDO75829 334 aa13.28□□□□□ -0.28
VTI1BP2-201ENST00000394154 MAP4K4O95819 1239 aaPredicted RBP13.28□□□□□ -0.28
VTI1BP2-201ENST00000394154 TIMP1P01033 207 aa13.28□□□□□ -0.28
VTI1BP2-201ENST00000394154 PPIGQ13427 754 aaKnown RBP eCLIP13.28□□□□□ -0.28
VTI1BP2-201ENST00000394154 SKIV2LQ15477 1246 aaKnown RBP13.28□□□□□ -0.28
VTI1BP2-201ENST00000394154 DPP9Q86TI2 863 aa13.28□□□□□ -0.28
VTI1BP2-201ENST00000394154 HERVK_113Q902F9 699 aa13.28□□□□□ -0.28
VTI1BP2-201ENST00000394154 CCDC8Q9H0W5 538 aaPredicted RBP13.28□□□□□ -0.28
VTI1BP2-201ENST00000394154 SLC28A3Q9HAS3 691 aa13.28□□□□□ -0.28
VTI1BP2-201ENST00000394154 ECHDC1Q9NTX5 307 aa13.28□□□□□ -0.28
VTI1BP2-201ENST00000394154 GINM1Q9NU53 330 aa13.28□□□□□ -0.28
VTI1BP2-201ENST00000394154 GPR75-ASB3A0A0A6YYF3 556 aa13.27□□□□□ -0.29
VTI1BP2-201ENST00000394154 ZBTB22O15209 634 aa13.27□□□□□ -0.29
VTI1BP2-201ENST00000394154 FAAP100Q0VG06 881 aa13.27□□□□□ -0.29
VTI1BP2-201ENST00000394154 C8orf34Q49A92 452 aa13.27□□□□□ -0.29
VTI1BP2-201ENST00000394154 FAM47AQ5JRC9 791 aa13.27□□□□□ -0.29
VTI1BP2-201ENST00000394154 TMEM240Q5SV17 173 aa13.27□□□□□ -0.29
VTI1BP2-201ENST00000394154 SPTY2D1Q68D10 685 aaPredicted RBP13.27□□□□□ -0.29
VTI1BP2-201ENST00000394154 USP17L2Q6R6M4 530 aa13.27□□□□□ -0.29
VTI1BP2-201ENST00000394154 ANKRD33Q7Z3H0 272 aa13.27□□□□□ -0.29
VTI1BP2-201ENST00000394154 NEUROD6Q96NK8 337 aa13.27□□□□□ -0.29
VTI1BP2-201ENST00000394154 TOX2Q96NM4 488 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms