RNA–Protein interactions for RNA: ENST00000393709.3

CYB561D1-203, Transcript of cytochrome b561 family member D1, humanhuman

APPRIS ALT1 TSL 4 BASIC

Gene CYB561D1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561D1-203ENST00000393709 CNMDO75829 334 aa16.41■□□□□ 0.22
CYB561D1-203ENST00000393709 EEF2P13639 858 aaKnown RBP16.41■□□□□ 0.22
CYB561D1-203ENST00000393709 HERVK_113P62684 666 aa16.41■□□□□ 0.22
CYB561D1-203ENST00000393709 PRKCZQ05513 592 aa16.41■□□□□ 0.22
CYB561D1-203ENST00000393709 FAM110CQ1W6H9 321 aa16.41■□□□□ 0.22
CYB561D1-203ENST00000393709 CWC27Q6UX04 472 aaKnown RBP16.41■□□□□ 0.22
CYB561D1-203ENST00000393709 MORF4L1Q9UBU8 362 aa16.41■□□□□ 0.22
CYB561D1-203ENST00000393709 PNMA3Q9UL41 463 aa16.41■□□□□ 0.22
CYB561D1-203ENST00000393709 BRCA2P51587 3418 aa16.41■□□□□ 0.22
CYB561D1-203ENST00000393709 FGRP09769 529 aa16.4■□□□□ 0.22
CYB561D1-203ENST00000393709 GRK4P32298 578 aa16.4■□□□□ 0.22
CYB561D1-203ENST00000393709 USP14P54578 494 aa16.4■□□□□ 0.22
CYB561D1-203ENST00000393709 MTFR1Q15390 333 aa16.4■□□□□ 0.22
CYB561D1-203ENST00000393709 CATSPERGQ6ZRH7 1159 aa16.4■□□□□ 0.22
CYB561D1-203ENST00000393709 CENPQQ7L2Z9 268 aaPredicted RBP16.4■□□□□ 0.22
CYB561D1-203ENST00000393709 RPAP3Q9H6T3 665 aaPredicted RBP16.4■□□□□ 0.22
CYB561D1-203ENST00000393709 VCPKMTQ9H867 229 aa16.4■□□□□ 0.22
CYB561D1-203ENST00000393709 RBPJLQ9UBG7 517 aa16.4■□□□□ 0.22
CYB561D1-203ENST00000393709 IRX3P78415 501 aaPredicted RBP16.39■□□□□ 0.21
CYB561D1-203ENST00000393709 PABPC4Q13310 644 aaKnown RBP eCLIP16.39■□□□□ 0.21
CYB561D1-203ENST00000393709 FAM47AQ5JRC9 791 aa16.39■□□□□ 0.21
CYB561D1-203ENST00000393709 TBC1D10CQ8IV04 446 aa16.39■□□□□ 0.21
CYB561D1-203ENST00000393709 CEP95Q96GE4 821 aa16.39■□□□□ 0.21
CYB561D1-203ENST00000393709 KANSL2Q9H9L4 492 aa16.39■□□□□ 0.21
CYB561D1-203ENST00000393709 DIAPH3Q9NSV4 1193 aa16.39■□□□□ 0.21
CYB561D1-203ENST00000393709 SPDYE16A6NNV3 312 aaPredicted RBP16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 USP17L15C9J2P7 530 aa16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 USP17L13C9JLJ4 530 aa16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 USP17L11C9JVI0 530 aa16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 USP17L18D6R9N7 530 aa16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 USP17L22D6RA61 530 aa16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 USP17L17D6RBQ6 530 aa16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 USP17L19D6RCP7 530 aa16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 USP17L20D6RJB6 530 aa16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 TNPO2O14787 897 aaKnown RBP16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 CHMLP26374 656 aa16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 GCLCP48506 637 aaPredicted RBP16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 USP17L24Q0WX57 530 aa16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 Q3C1V9 767 aa16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 SPICE1Q8N0Z3 855 aa16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 NEDD1Q8NHV4 660 aa16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 MKNK2Q9HBH9 465 aa16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 MYH4Q9Y623 1939 aa16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 MKI67P46013 3256 aaKnown RBP16.38■□□□□ 0.21
CYB561D1-203ENST00000393709 FLT3LGP49771 235 aa16.37■□□□□ 0.21
CYB561D1-203ENST00000393709 HAND2P61296 217 aa16.37■□□□□ 0.21
CYB561D1-203ENST00000393709 LBX2Q6XYB7 198 aa16.37■□□□□ 0.21
CYB561D1-203ENST00000393709 ARHGEF10LQ9HCE6 1279 aa16.37■□□□□ 0.21
CYB561D1-203ENST00000393709 IL17RBQ9NRM6 502 aa16.37■□□□□ 0.21
CYB561D1-203ENST00000393709 MTMR4Q9NYA4 1195 aa16.37■□□□□ 0.21
CYB561D1-203ENST00000393709 BTBD7Q9P203 1132 aa16.37■□□□□ 0.21
CYB561D1-203ENST00000393709 NYAP2Q9P242 653 aa16.37■□□□□ 0.21
CYB561D1-203ENST00000393709 BIN2Q9UBW5 565 aaPredicted RBP16.37■□□□□ 0.21
CYB561D1-203ENST00000393709 HIP1O00291 1037 aa16.36■□□□□ 0.21
CYB561D1-203ENST00000393709 ORC4O43929 436 aa16.36■□□□□ 0.21
CYB561D1-203ENST00000393709 NMT2O60551 498 aa16.36■□□□□ 0.21
CYB561D1-203ENST00000393709 NOVP48745 357 aa16.36■□□□□ 0.21
CYB561D1-203ENST00000393709 PORCNQ9H237 461 aa16.36■□□□□ 0.21
CYB561D1-203ENST00000393709 FBXO28Q9NVF7 368 aa16.36■□□□□ 0.21
CYB561D1-203ENST00000393709 NEDD4P46934 1319 aa16.36■□□□□ 0.21
CYB561D1-203ENST00000393709 ADCY3O60266 1144 aa16.35■□□□□ 0.21
CYB561D1-203ENST00000393709 NDUFB10O96000 172 aa16.35■□□□□ 0.21
CYB561D1-203ENST00000393709 ELNP15502 786 aa16.35■□□□□ 0.21
CYB561D1-203ENST00000393709 ERVK-9P63128 1117 aa16.35■□□□□ 0.21
CYB561D1-203ENST00000393709 ERVK-24P63145 666 aa16.35■□□□□ 0.21
CYB561D1-203ENST00000393709 TFAP4Q01664 338 aa16.35■□□□□ 0.21
CYB561D1-203ENST00000393709 ATP2B2Q01814 1243 aa16.35■□□□□ 0.21
CYB561D1-203ENST00000393709 PDE4BQ07343 736 aa16.35■□□□□ 0.21
CYB561D1-203ENST00000393709 PRPF38BQ5VTL8 546 aaKnown RBP16.35■□□□□ 0.21
CYB561D1-203ENST00000393709 RASGRP2Q7LDG7 609 aa16.35■□□□□ 0.21
CYB561D1-203ENST00000393709 LRRC47Q8N1G4 583 aaKnown RBP16.35■□□□□ 0.21
CYB561D1-203ENST00000393709 LPAR1Q92633 364 aa16.35■□□□□ 0.21
CYB561D1-203ENST00000393709 COA7Q96BR5 231 aa16.35■□□□□ 0.21
CYB561D1-203ENST00000393709 NUP88Q99567 741 aaPredicted RBP16.35■□□□□ 0.21
CYB561D1-203ENST00000393709 DSCC1Q9BVC3 393 aa16.35■□□□□ 0.21
CYB561D1-203ENST00000393709 COL11A1P12107 1806 aaPredicted RBP16.34■□□□□ 0.21
CYB561D1-203ENST00000393709 WDR46O15213 610 aaKnown RBP16.34■□□□□ 0.21
CYB561D1-203ENST00000393709 CCL5P13501 91 aa16.34■□□□□ 0.21
CYB561D1-203ENST00000393709 ZNF444Q8N0Y2 327 aaPredicted RBP16.34■□□□□ 0.21
CYB561D1-203ENST00000393709 SLAIN1Q8ND83 568 aa16.34■□□□□ 0.21
CYB561D1-203ENST00000393709 MKL1Q969V6 931 aa16.34■□□□□ 0.21
CYB561D1-203ENST00000393709 ATG4CQ96DT6 458 aa16.34■□□□□ 0.21
CYB561D1-203ENST00000393709 PAGR1Q9BTK6 254 aa16.34■□□□□ 0.21
CYB561D1-203ENST00000393709 GJD2Q9UKL4 321 aa16.34■□□□□ 0.21
CYB561D1-203ENST00000393709 RAD50Q92878 1312 aa16.34■□□□□ 0.21
CYB561D1-203ENST00000393709 SGSM2O43147 1006 aa16.33■□□□□ 0.2
CYB561D1-203ENST00000393709 UBXN2AP68543 259 aa16.33■□□□□ 0.2
CYB561D1-203ENST00000393709 PTH1RQ03431 593 aa16.33■□□□□ 0.2
CYB561D1-203ENST00000393709 IRF5Q13568 498 aa16.33■□□□□ 0.2
CYB561D1-203ENST00000393709 FAM83BQ5T0W9 1011 aa16.33■□□□□ 0.2
CYB561D1-203ENST00000393709 STAG1Q8WVM7 1258 aa16.33■□□□□ 0.2
CYB561D1-203ENST00000393709 TANGO6Q9C0B7 1094 aa16.33■□□□□ 0.2
CYB561D1-203ENST00000393709 RNF208Q9H0X6 261 aa16.33■□□□□ 0.2
CYB561D1-203ENST00000393709 SH2D4AQ9H788 454 aa16.33■□□□□ 0.2
CYB561D1-203ENST00000393709 CLIP2Q9UDT6 1046 aa16.33■□□□□ 0.2
CYB561D1-203ENST00000393709 RABGAP1Q9Y3P9 1069 aa16.33■□□□□ 0.2
CYB561D1-203ENST00000393709 TAF6LQ9Y6J9 622 aa16.33■□□□□ 0.2
CYB561D1-203ENST00000393709 F5H6K3 240 aa16.32■□□□□ 0.2
CYB561D1-203ENST00000393709 SLC3A2P08195 630 aaKnown RBP16.32■□□□□ 0.2
CYB561D1-203ENST00000393709 TSPY3P0CV98 308 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms