RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 MED4Q9NPJ6 270 aa11.7□□□□□ -0.54
HIPK1-202ENST00000361587 ZNF518AQ6AHZ1 1483 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 TCP1P17987 556 aaKnown RBP11.69□□□□□ -0.54
HIPK1-202ENST00000361587 FBLN1P23142 703 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 CCDC170Q8IYT3 715 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 DBNDD2Q9BQY9 259 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 ARPP21Q9UBL0 812 aaPredicted RBP11.69□□□□□ -0.54
HIPK1-202ENST00000361587 DDX41Q9UJV9 622 aaKnown RBP11.69□□□□□ -0.54
HIPK1-202ENST00000361587 NOD1Q9Y239 953 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 SBNO1A3KN83 1393 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 EFCAB8A8MWE9 144 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 MGEA5O60502 916 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 IGSF3O75054 1194 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 LUC7L3O95232 432 aaKnown RBP11.69□□□□□ -0.54
HIPK1-202ENST00000361587 SLC1A4P43007 532 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 MUM1Q2TAK8 710 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 RRAGAQ7L523 313 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 PALM2Q8IXS6 379 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 SUPT20HQ8NEM7 779 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 ATP8A2Q9NTI2 1148 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 TNNQ9UQP3 1299 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 RAPGEF6Q8TEU7 1601 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 KRT3P12035 628 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 HADHQ16836 314 aaKnown RBP11.69□□□□□ -0.54
HIPK1-202ENST00000361587 TYW1BQ6NUM6 668 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 REXO1Q8N1G1 1221 aaKnown RBP11.69□□□□□ -0.54
HIPK1-202ENST00000361587 TSC1Q92574 1164 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 KRT12Q99456 494 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 RIOK1Q9BRS2 568 aaKnown RBP11.69□□□□□ -0.54
HIPK1-202ENST00000361587 NCOA5Q9HCD5 579 aaKnown RBP11.69□□□□□ -0.54
HIPK1-202ENST00000361587 TFCP2L1Q9NZI6 479 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 PCDHB13Q9Y5F0 798 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 PSDA5PKW4 1024 aaPredicted RBP11.69□□□□□ -0.54
HIPK1-202ENST00000361587 GALNT17Q6IS24 598 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 PDZD4Q76G19 769 aaPredicted RBP11.69□□□□□ -0.54
HIPK1-202ENST00000361587 ZNF274Q96GC6 653 aaPredicted RBP11.69□□□□□ -0.54
HIPK1-202ENST00000361587 LSM14BQ9BX40 385 aaKnown RBP11.69□□□□□ -0.54
HIPK1-202ENST00000361587 LMBRD1Q9NUN5 540 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 A0A1W2PP64 1363 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 GOLGA8QA0A0J9YX86 632 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 GOLGA8OA6NCC3 632 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 GOLGA8NF8WBI6 632 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 HIP1RO75146 1068 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 CD19P15391 556 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 PNMA2Q9UL42 364 aa11.69□□□□□ -0.54
HIPK1-202ENST00000361587 XRCC5P13010 732 aaKnown RBP11.68□□□□□ -0.54
HIPK1-202ENST00000361587 PDE6BP35913 854 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 TBC1D22AQ8WUA7 517 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 ZNF790Q6PG37 636 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 DYMQ7RTS9 669 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 HAUS4Q9H6D7 363 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 KCNJ18B7U540 433 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 M0QZ92 97 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 PFDN6O15212 129 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 SEC24BO95487 1268 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 KCNJ12Q14500 433 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 CDC37L1Q7L3B6 337 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 NLRX1Q86UT6 975 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 PROCA1Q8NCQ7 364 aaPredicted RBP11.68□□□□□ -0.54
HIPK1-202ENST00000361587 BAIAP2L1Q9UHR4 511 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 IVNS1ABPQ9Y6Y0 642 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 BRD1O95696 1058 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 GNGT1P63211 74 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 ZSCAN26Q16670 478 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 MYOCDQ8IZQ8 938 aa11.68□□□□□ -0.54
HIPK1-202ENST00000361587 XPO4Q9C0E2 1151 aaKnown RBP11.68□□□□□ -0.54
HIPK1-202ENST00000361587 MYCLP12524 364 aaPredicted RBP11.67□□□□□ -0.54
HIPK1-202ENST00000361587 RPS6KA2Q15349 733 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 C2CD5Q86YS7 1000 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 CCDC13Q8IYE1 715 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 SPATA5Q8NB90 893 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 FAM71BQ8TC56 605 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 MAGEF1Q9HAY2 307 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 LARSQ9P2J5 1176 aaKnown RBP11.67□□□□□ -0.54
HIPK1-202ENST00000361587 MYO1AQ9UBC5 1043 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 ZNF608Q9ULD9 1512 aaPredicted RBP11.67□□□□□ -0.54
HIPK1-202ENST00000361587 GCP02774 474 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 MAN1A1P33908 653 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 MAP2K2P36507 400 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 TIMM10P62072 90 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 MUM1L1Q5H9M0 696 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 EDC4Q6P2E9 1401 aaKnown RBP11.67□□□□□ -0.54
HIPK1-202ENST00000361587 MORC3Q14149 939 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 U2AF1L4Q8WU68 220 aaKnown RBP11.67□□□□□ -0.54
HIPK1-202ENST00000361587 FAM227BQ96M60 508 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 METTL14Q9HCE5 456 aaKnown RBP11.67□□□□□ -0.54
HIPK1-202ENST00000361587 KIAA1468Q9P260 1216 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 H7C1D1 291 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 KRIT1O00522 736 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 ARHGAP4P98171 946 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 NELFCDQ8IXH7 590 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 SLFN12Q8IYM2 578 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 NACA2Q9H009 215 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 CD2APQ9Y5K6 639 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 TRAPPC8Q9Y2L5 1435 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 WDR46O15213 610 aaKnown RBP11.67□□□□□ -0.54
HIPK1-202ENST00000361587 EVI5O60447 810 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 ATP5JP18859 108 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 MYSM1Q5VVJ2 828 aa11.67□□□□□ -0.54
HIPK1-202ENST00000361587 DDX27Q96GQ7 796 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms