RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 RRAGAQ7L523 313 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 TSPYL6Q8N831 410 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 LINS1Q8NG48 757 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 CLASP1Q7Z460 1538 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 CTNND1O60716 968 aaKnown RBP9.66□□□□□ -0.86
COL6A6-201ENST00000358511 PER1O15534 1290 aaPredicted RBP9.66□□□□□ -0.86
COL6A6-201ENST00000358511 CCNT1O60563 726 aaKnown RBP9.66□□□□□ -0.86
COL6A6-201ENST00000358511 IRX1P78414 480 aaPredicted RBP9.66□□□□□ -0.86
COL6A6-201ENST00000358511 PRDM11Q9NQV5 511 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 REREQ9P2R6 1566 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 LOC102724159A0A0B4J2E5 919 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 JAK2O60674 1132 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 PWP2Q15269 919 aaKnown RBP9.66□□□□□ -0.86
COL6A6-201ENST00000358511 ANKLE2Q86XL3 938 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 FAM207AQ9NSI2 230 aaPredicted RBP9.66□□□□□ -0.86
COL6A6-201ENST00000358511 FANCLQ9NW38 375 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 IKBKBO14920 756 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 RNF8O76064 485 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 LDHCP07864 332 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 BCRP11274 1271 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 ZNF354CQ86Y25 554 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 GRK7Q8WTQ7 553 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 YY1AP1Q9H869 796 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 IL9RQ01113 521 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 ARMC2Q8NEN0 867 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 CFAP61Q8NHU2 1237 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 MRRFQ96E11 262 aaKnown RBP9.66□□□□□ -0.86
COL6A6-201ENST00000358511 DRC3Q9H069 523 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 WDR62O43379 1518 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 GSPT1P15170 499 aaKnown RBP9.66□□□□□ -0.86
COL6A6-201ENST00000358511 NBPF6Q5VWK0 638 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 NBPF4Q96M43 638 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 TRIM35Q9UPQ4 493 aa9.66□□□□□ -0.86
COL6A6-201ENST00000358511 POLE2P56282 527 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 PPP2R5BQ15173 497 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 NBPF10Q6P3W6 841 aaKnown RBP9.65□□□□□ -0.86
COL6A6-201ENST00000358511 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.65□□□□□ -0.86
COL6A6-201ENST00000358511 TRAPPC8Q9Y2L5 1435 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 MAP3K7O43318 606 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 CRCPO75575 148 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 CYP7A1P22680 504 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 TTC38Q5R3I4 469 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 SCYL3Q8IZE3 742 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 ABTB1Q969K4 478 aaPredicted RBP9.65□□□□□ -0.86
COL6A6-201ENST00000358511 PLIN2Q99541 437 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 SPZ1Q9BXG8 430 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 MGEA5O60502 916 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 BIRC2Q13490 618 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 EMBQ6PCB8 327 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 CMA1P23946 247 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 NDUFA8P51970 172 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 MYSM1Q5VVJ2 828 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 AMOTL2Q9Y2J4 779 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 A0A1W2PQ27 194 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 A0A1W2PQ64 194 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 A0A1W2PQD8 194 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 KRT5P13647 590 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 DYNC1I2Q13409 638 aaKnown RBP9.65□□□□□ -0.86
COL6A6-201ENST00000358511 THEMISQ8N1K5 641 aaPredicted RBP9.65□□□□□ -0.86
COL6A6-201ENST00000358511 KRT12Q99456 494 aa9.65□□□□□ -0.86
COL6A6-201ENST00000358511 FNBP4Q8N3X1 1017 aaPredicted RBP9.65□□□□□ -0.87
COL6A6-201ENST00000358511 MAGEB6Q8N7X4 407 aa9.65□□□□□ -0.87
COL6A6-201ENST00000358511 EPS15L1Q9UBC2 864 aa9.65□□□□□ -0.87
COL6A6-201ENST00000358511 ANKRD12Q6UB98 2062 aa9.65□□□□□ -0.87
COL6A6-201ENST00000358511 ESRRGP62508 458 aa9.65□□□□□ -0.87
COL6A6-201ENST00000358511 TEX2Q8IWB9 1127 aa9.65□□□□□ -0.87
COL6A6-201ENST00000358511 LRRC8CQ8TDW0 803 aa9.65□□□□□ -0.87
COL6A6-201ENST00000358511 TFCP2Q12800 502 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 NNTQ13423 1086 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 KMT5BQ4FZB7 885 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 HAUS3Q68CZ6 603 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 SLC35F6Q8N357 371 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 KLHL29Q96CT2 875 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 MAGEB6P1A0A0J9YX57 407 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 FAM227BQ96M60 508 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 PASKQ96RG2 1323 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 TEX13AQ9BXU3 409 aaPredicted RBP9.64□□□□□ -0.87
COL6A6-201ENST00000358511 ZBTB3Q9H5J0 574 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 ANGPTL2Q9UKU9 493 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 STK10O94804 968 aaKnown RBP9.64□□□□□ -0.87
COL6A6-201ENST00000358511 LMNAP02545 664 aaKnown RBP9.64□□□□□ -0.87
COL6A6-201ENST00000358511 PRPF31Q8WWY3 499 aaKnown RBP9.64□□□□□ -0.87
COL6A6-201ENST00000358511 DEUP1Q05D60 604 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 ST13P4Q8IZP2 240 aaPredicted RBP9.64□□□□□ -0.87
COL6A6-201ENST00000358511 TRPM2O94759 1503 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 MORC4Q8TE76 937 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 ABCC4O15439 1325 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 GABPB2Q8TAK5 448 aaPredicted RBP9.64□□□□□ -0.87
COL6A6-201ENST00000358511 SPDL1Q96EA4 605 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 NAP1L4Q99733 375 aaKnown RBP9.64□□□□□ -0.87
COL6A6-201ENST00000358511 SLC24A3Q9HC58 644 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 CXorf38Q8TB03 319 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 SUFUQ9UMX1 484 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 PZPP20742 1482 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 SBNO1A3KN83 1393 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 SLC4A8Q2Y0W8 1093 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 PPP1R21Q6ZMI0 780 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 STK24Q9Y6E0 443 aa9.64□□□□□ -0.87
COL6A6-201ENST00000358511 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.64□□□□□ -0.87
COL6A6-201ENST00000358511 TNNI2P48788 182 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms