RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 ZKSCAN3Q9BRR0 538 aa22.73■■□□□ 1.23
UBC-201ENST00000339647 NLRP2Q9NX02 1062 aa22.73■■□□□ 1.23
UBC-201ENST00000339647 GOLGA6AQ9NYA3 693 aa22.73■■□□□ 1.23
UBC-201ENST00000339647 LIMA1Q9UHB6 759 aaKnown RBP22.73■■□□□ 1.23
UBC-201ENST00000339647 SCN11AQ9UI33 1791 aa22.72■■□□□ 1.23
UBC-201ENST00000339647 MCM3P25205 808 aa22.72■■□□□ 1.23
UBC-201ENST00000339647 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.72■■□□□ 1.23
UBC-201ENST00000339647 BLZF1Q9H2G9 400 aa22.72■■□□□ 1.23
UBC-201ENST00000339647 MYO5AQ9Y4I1 1855 aaKnown RBP22.72■■□□□ 1.23
UBC-201ENST00000339647 ZNF185O15231 689 aa22.72■■□□□ 1.23
UBC-201ENST00000339647 IDH1O75874 414 aaKnown RBP22.72■■□□□ 1.23
UBC-201ENST00000339647 TTC19Q6DKK2 380 aaPredicted RBP22.72■■□□□ 1.23
UBC-201ENST00000339647 CCNI2Q6ZMN8 369 aaPredicted RBP22.72■■□□□ 1.23
UBC-201ENST00000339647 AATFQ9NY61 560 aaKnown RBP eCLIP22.72■■□□□ 1.239e-7■■□□□ 13.5
UBC-201ENST00000339647 CEP131Q9UPN4 1083 aa22.72■■□□□ 1.23
UBC-201ENST00000339647 ADAMTSL3P82987 1691 aa22.72■■□□□ 1.23
UBC-201ENST00000339647 EBAG9O00559 213 aa22.71■■□□□ 1.23
UBC-201ENST00000339647 SWT1Q5T5J6 900 aaKnown RBP22.71■■□□□ 1.23
UBC-201ENST00000339647 TRIM22Q8IYM9 498 aa22.71■■□□□ 1.23
UBC-201ENST00000339647 GSDMAQ96QA5 445 aa22.71■■□□□ 1.23
UBC-201ENST00000339647 LIFRP42702 1097 aa22.71■■□□□ 1.23
UBC-201ENST00000339647 HERVK_113P62684 666 aa22.71■■□□□ 1.23
UBC-201ENST00000339647 CCDC122Q5T0U0 273 aa22.71■■□□□ 1.23
UBC-201ENST00000339647 PIH1D3Q9NQM4 214 aaKnown RBP22.71■■□□□ 1.23
UBC-201ENST00000339647 TARSL2A2RTX5 802 aaKnown RBP22.7■■□□□ 1.22
UBC-201ENST00000339647 LRRC10BA6NIK2 292 aa22.7■■□□□ 1.22
UBC-201ENST00000339647 PDE2AO00408 941 aaPredicted RBP22.7■■□□□ 1.22
UBC-201ENST00000339647 RRAGBQ5VZM2 374 aa22.7■■□□□ 1.22
UBC-201ENST00000339647 BCAS4Q8TDM0 211 aa22.7■■□□□ 1.22
UBC-201ENST00000339647 FAM107BQ9H098 131 aa22.7■■□□□ 1.22
UBC-201ENST00000339647 HNRNPH1P31943 449 aaKnown RBP22.7■■□□□ 1.22
UBC-201ENST00000339647 ZC3H6P61129 1189 aaKnown RBP22.7■■□□□ 1.22
UBC-201ENST00000339647 RTN1Q16799 776 aa22.7■■□□□ 1.22
UBC-201ENST00000339647 EARS2Q5JPH6 523 aaKnown RBP22.7■■□□□ 1.22
UBC-201ENST00000339647 PAPD7Q5XG87 772 aaKnown RBP22.7■■□□□ 1.22
UBC-201ENST00000339647 JAKMIP2Q96AA8 810 aa22.7■■□□□ 1.22
UBC-201ENST00000339647 HAUS4Q9H6D7 363 aa22.7■■□□□ 1.22
UBC-201ENST00000339647 ZNF532Q9HCE3 1301 aa22.69■■□□□ 1.22
UBC-201ENST00000339647 GOLGA6BA6NDN3 693 aa22.69■■□□□ 1.22
UBC-201ENST00000339647 WNT7AO00755 349 aa22.69■■□□□ 1.22
UBC-201ENST00000339647 UBXN1Q04323 297 aa22.69■■□□□ 1.22
UBC-201ENST00000339647 IFNL2Q8IZJ0 200 aa22.69■■□□□ 1.22
UBC-201ENST00000339647 GNL3LQ9NVN8 582 aaKnown RBP22.69■■□□□ 1.22
UBC-201ENST00000339647 TTC26A0AVF1 554 aa22.69■■□□□ 1.22
UBC-201ENST00000339647 TATP17735 454 aaPredicted RBP22.69■■□□□ 1.22
UBC-201ENST00000339647 KCNV1Q6PIU1 500 aa22.69■■□□□ 1.22
UBC-201ENST00000339647 CEP89Q96ST8 783 aa22.69■■□□□ 1.22
UBC-201ENST00000339647 TBC1D2BQ9UPU7 963 aa22.69■■□□□ 1.22
UBC-201ENST00000339647 KCNJ18B7U540 433 aa22.68■■□□□ 1.22
UBC-201ENST00000339647 A1BGP04217 495 aa22.68■■□□□ 1.22
UBC-201ENST00000339647 C2orf54Q08AI8 447 aa22.68■■□□□ 1.22
UBC-201ENST00000339647 KCNJ12Q14500 433 aa22.68■■□□□ 1.22
UBC-201ENST00000339647 TTF1Q15361 905 aaPredicted RBP22.68■■□□□ 1.22
UBC-201ENST00000339647 TCP11X2Q5H9J9 407 aa22.68■■□□□ 1.22
UBC-201ENST00000339647 CRACR2BQ8N4Y2 399 aaPredicted RBP22.68■■□□□ 1.22
UBC-201ENST00000339647 CAGE1Q8TC20 777 aa22.68■■□□□ 1.22
UBC-201ENST00000339647 SHISA4Q96DD7 197 aa22.68■■□□□ 1.22
UBC-201ENST00000339647 CAPS2Q9BXY5 557 aa22.68■■□□□ 1.22
UBC-201ENST00000339647 MAPK8IP1Q9UQF2 711 aa22.68■■□□□ 1.22
UBC-201ENST00000339647 MYH7P12883 1935 aa22.68■■□□□ 1.22
UBC-201ENST00000339647 RRP12Q5JTH9 1297 aaKnown RBP22.68■■□□□ 1.22
UBC-201ENST00000339647 SAMM50Q9Y512 469 aa22.68■■□□□ 1.22
UBC-201ENST00000339647 LAMB4A4D0S4 1761 aa22.68■■□□□ 1.22
UBC-201ENST00000339647 TRIM75PA6NK02 468 aa22.67■■□□□ 1.22
UBC-201ENST00000339647 CYP27B1O15528 508 aa22.67■■□□□ 1.22
UBC-201ENST00000339647 MNAT1P51948 309 aa22.67■■□□□ 1.22
UBC-201ENST00000339647 PPFIA1Q13136 1202 aa22.67■■□□□ 1.22
UBC-201ENST00000339647 VPS54Q9P1Q0 977 aa22.67■■□□□ 1.22
UBC-201ENST00000339647 GRIN2DO15399 1336 aa22.67■■□□□ 1.22
UBC-201ENST00000339647 TJP1Q07157 1748 aa22.67■■□□□ 1.22
UBC-201ENST00000339647 DEXIO95424 95 aa22.67■■□□□ 1.22
UBC-201ENST00000339647 GNGT1P63211 74 aa22.67■■□□□ 1.22
UBC-201ENST00000339647 TRIM14Q14142 442 aa22.67■■□□□ 1.22
UBC-201ENST00000339647 CCDC91Q7Z6B0 441 aa22.67■■□□□ 1.22
UBC-201ENST00000339647 RRP36Q96EU6 259 aaKnown RBP22.67■■□□□ 1.22
UBC-201ENST00000339647 LMTK3Q96Q04 1460 aa22.67■■□□□ 1.22
UBC-201ENST00000339647 RGPD5Q99666 1765 aa22.67■■□□□ 1.22
UBC-201ENST00000339647 NUP133Q8WUM0 1156 aa22.66■■□□□ 1.22
UBC-201ENST00000339647 EPB41L4AQ9HCS5 686 aaPredicted RBP22.66■■□□□ 1.22
UBC-201ENST00000339647 XDHP47989 1333 aa22.66■■□□□ 1.22
UBC-201ENST00000339647 CAMTA1Q9Y6Y1 1673 aa22.66■■□□□ 1.22
UBC-201ENST00000339647 RCCD1A6NED2 376 aa22.66■■□□□ 1.22
UBC-201ENST00000339647 CABP4P57796 275 aa22.66■■□□□ 1.22
UBC-201ENST00000339647 MRPS25P82663 173 aaKnown RBP22.66■■□□□ 1.22
UBC-201ENST00000339647 WDR59Q6PJI9 974 aa22.66■■□□□ 1.22
UBC-201ENST00000339647 OR8K1Q8NGG5 319 aa22.66■■□□□ 1.22
UBC-201ENST00000339647 STRBPQ96SI9 672 aaKnown RBP22.66■■□□□ 1.22
UBC-201ENST00000339647 LACRTQ9GZZ8 138 aa22.66■■□□□ 1.22
UBC-201ENST00000339647 EIF3HO15372 352 aaKnown RBP eCLIP22.65■■□□□ 1.22
UBC-201ENST00000339647 EZH2Q15910 746 aaKnown RBP22.65■■□□□ 1.22
UBC-201ENST00000339647 SND1Q7KZF4 910 aaKnown RBP eCLIP22.65■■□□□ 1.221e-10■■□□□ 11.6
UBC-201ENST00000339647 NELFBQ8WX92 580 aa22.65■■□□□ 1.22
UBC-201ENST00000339647 CKAP4Q07065 602 aaKnown RBP22.65■■□□□ 1.22
UBC-201ENST00000339647 TEX2Q8IWB9 1127 aa22.65■■□□□ 1.22
UBC-201ENST00000339647 HDAC7Q8WUI4 952 aa22.65■■□□□ 1.22
UBC-201ENST00000339647 DCAF5Q96JK2 942 aa22.65■■□□□ 1.22
UBC-201ENST00000339647 RWDD2AQ9UIY3 292 aa22.65■■□□□ 1.22
UBC-201ENST00000339647 DUSP10Q9Y6W6 482 aa22.65■■□□□ 1.22
UBC-201ENST00000339647 hCG_1642624A0A1W2PR95 340 aa22.65■■□□□ 1.22
UBC-201ENST00000339647 PDE6AP16499 860 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms