RNA–Protein interactions for RNA: ENST00000335798.8

UBE2E2-201, Transcript of ubiquitin conjugating enzyme E2 E2, humanhuman

TSL 1 (best)

Gene UBE2E2, Length 1,330 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2-201ENST00000335798 FEZ1Q99689 392 aa22.86■■□□□ 1.25
UBE2E2-201ENST00000335798 SH2D4AQ9H788 454 aa22.86■■□□□ 1.25
UBE2E2-201ENST00000335798 VCPKMTQ9H867 229 aa22.86■■□□□ 1.25
UBE2E2-201ENST00000335798 PRC1O43663 620 aa22.85■■□□□ 1.25
UBE2E2-201ENST00000335798 RBM25P49756 843 aaKnown RBP22.85■■□□□ 1.25
UBE2E2-201ENST00000335798 USP14P54578 494 aa22.85■■□□□ 1.25
UBE2E2-201ENST00000335798 INHBEP58166 350 aa22.85■■□□□ 1.25
UBE2E2-201ENST00000335798 ATP2B2Q01814 1243 aa22.85■■□□□ 1.25
UBE2E2-201ENST00000335798 ZYXQ15942 572 aaKnown RBP22.85■■□□□ 1.25
UBE2E2-201ENST00000335798 CCDC178Q5BJE1 867 aa22.85■■□□□ 1.25
UBE2E2-201ENST00000335798 GPAT2Q6NUI2 795 aa22.85■■□□□ 1.25
UBE2E2-201ENST00000335798 USP17L2Q6R6M4 530 aa22.85■■□□□ 1.25
UBE2E2-201ENST00000335798 DHX32Q7L7V1 743 aaKnown RBP22.85■■□□□ 1.25
UBE2E2-201ENST00000335798 LRRC47Q8N1G4 583 aaKnown RBP22.85■■□□□ 1.25
UBE2E2-201ENST00000335798 TMEM47Q9BQJ4 181 aa22.85■■□□□ 1.25
UBE2E2-201ENST00000335798 UBAC1Q9BSL1 405 aa22.85■■□□□ 1.25
UBE2E2-201ENST00000335798 TM6SF1Q9BZW5 370 aa22.85■■□□□ 1.25
UBE2E2-201ENST00000335798 IGF2BP3O00425 579 aaKnown RBP eCLIP22.84■■□□□ 1.25
UBE2E2-201ENST00000335798 HMGB1P09429 215 aaKnown RBP22.84■■□□□ 1.25
UBE2E2-201ENST00000335798 CPA1P15085 419 aa22.84■■□□□ 1.25
UBE2E2-201ENST00000335798 SREBF2Q12772 1141 aa22.84■■□□□ 1.25
UBE2E2-201ENST00000335798 FASTKD5Q7L8L6 764 aaKnown RBP22.84■■□□□ 1.25
UBE2E2-201ENST00000335798 REM2Q8IYK8 340 aaPredicted RBP22.84■■□□□ 1.25
UBE2E2-201ENST00000335798 GMCL1P1Q8NEA9 526 aa22.84■■□□□ 1.25
UBE2E2-201ENST00000335798 C22orf23Q9BZE7 217 aa22.84■■□□□ 1.25
UBE2E2-201ENST00000335798 ZSWIM6Q9HCJ5 1215 aa22.84■■□□□ 1.25
UBE2E2-201ENST00000335798 A0A0G2JMZ2 1700 aa22.84■■□□□ 1.25
UBE2E2-201ENST00000335798 BTBD19C9JJ37 291 aa22.83■■□□□ 1.25
UBE2E2-201ENST00000335798 TOP1P11387 765 aaKnown RBP22.83■■□□□ 1.25
UBE2E2-201ENST00000335798 CASTP20810 708 aaKnown RBP22.83■■□□□ 1.25
UBE2E2-201ENST00000335798 PSMA5P28066 241 aa22.83■■□□□ 1.25
UBE2E2-201ENST00000335798 TREML2Q5T2D2 321 aa22.83■■□□□ 1.25
UBE2E2-201ENST00000335798 LPAR1Q92633 364 aa22.83■■□□□ 1.25
UBE2E2-201ENST00000335798 TMEM87BQ96K49 555 aa22.83■■□□□ 1.25
UBE2E2-201ENST00000335798 KIF2CQ99661 725 aa22.83■■□□□ 1.25
UBE2E2-201ENST00000335798 SENP2Q9HC62 589 aa22.83■■□□□ 1.25
UBE2E2-201ENST00000335798 AGTPBP1Q9UPW5 1226 aa22.83■■□□□ 1.25
UBE2E2-201ENST00000335798 F5H6K3 240 aa22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 SH2B2O14492 632 aaPredicted RBP22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 IFIT3O14879 490 aaKnown RBP22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 NDUFB10O96000 172 aa22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 VCAM1P19320 739 aa22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 RPS6KB1P23443 525 aa22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 KLRC3Q07444 240 aa22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 BLOC1S2Q6QNY1 142 aa22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 IFNL1Q8IU54 200 aa22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 FAM43AQ8N2R8 423 aa22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 TCEANC2Q96MN5 208 aa22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 LY9Q9HBG7 655 aa22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 GOPCQ9HD26 462 aa22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 GPHNQ9NQX3 736 aaPredicted RBP22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 TMOD4Q9NZQ9 345 aa22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 COL11A1P12107 1806 aaPredicted RBP22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 SART3Q15020 963 aaKnown RBP22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 GADL1Q6ZQY3 521 aa22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 RUFY3Q7L099 469 aa22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 ANKRD23Q86SG2 305 aa22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 FBXL16Q8N461 479 aa22.82■■□□□ 1.24
UBE2E2-201ENST00000335798 PCNTO95613 3336 aa22.81■■□□□ 1.24
UBE2E2-201ENST00000335798 LIFRP42702 1097 aa22.81■■□□□ 1.24
UBE2E2-201ENST00000335798 WTAPQ15007 396 aa22.81■■□□□ 1.24
UBE2E2-201ENST00000335798 TMEM67Q5HYA8 995 aa22.81■■□□□ 1.24
UBE2E2-201ENST00000335798 IFIT1BQ5T764 474 aaKnown RBP22.81■■□□□ 1.24
UBE2E2-201ENST00000335798 RASGRP2Q7LDG7 609 aa22.81■■□□□ 1.24
UBE2E2-201ENST00000335798 SPICE1Q8N0Z3 855 aa22.81■■□□□ 1.24
UBE2E2-201ENST00000335798 TBC1D32Q96NH3 1257 aa22.81■■□□□ 1.24
UBE2E2-201ENST00000335798 LRRC2Q9BYS8 371 aa22.81■■□□□ 1.24
UBE2E2-201ENST00000335798 AGXT2Q9BYV1 514 aa22.81■■□□□ 1.24
UBE2E2-201ENST00000335798 UPF2Q9HAU5 1272 aaKnown RBP22.81■■□□□ 1.24
UBE2E2-201ENST00000335798 ZCCHC17Q9NP64 241 aaKnown RBP22.81■■□□□ 1.24
UBE2E2-201ENST00000335798 SLC45A1Q9Y2W3 748 aa22.81■■□□□ 1.24
UBE2E2-201ENST00000335798 WDR46O15213 610 aaKnown RBP22.8■■□□□ 1.24
UBE2E2-201ENST00000335798 HOXA7P31268 230 aaPredicted RBP22.8■■□□□ 1.24
UBE2E2-201ENST00000335798 JMYQ8N9B5 988 aa22.8■■□□□ 1.24
UBE2E2-201ENST00000335798 GMCL1Q96IK5 515 aa22.8■■□□□ 1.24
UBE2E2-201ENST00000335798 UPF3BQ9BZI7 483 aaKnown RBP22.8■■□□□ 1.24
UBE2E2-201ENST00000335798 ERICH2A1L162 156 aa22.79■■□□□ 1.24
UBE2E2-201ENST00000335798 SNHG28P0DPA3 235 aa22.79■■□□□ 1.24
UBE2E2-201ENST00000335798 SLFN13Q68D06 897 aa22.79■■□□□ 1.24
UBE2E2-201ENST00000335798 SGMS1Q86VZ5 419 aa22.79■■□□□ 1.24
UBE2E2-201ENST00000335798 PNMA1Q8ND90 353 aa22.79■■□□□ 1.24
UBE2E2-201ENST00000335798 PDHXO00330 501 aa22.78■■□□□ 1.24
UBE2E2-201ENST00000335798 PDHBP11177 359 aa22.78■■□□□ 1.24
UBE2E2-201ENST00000335798 RPAP3Q9H6T3 665 aaPredicted RBP22.78■■□□□ 1.24
UBE2E2-201ENST00000335798 KAT14Q9H8E8 782 aa22.78■■□□□ 1.24
UBE2E2-201ENST00000335798 CYP46A1Q9Y6A2 500 aa22.78■■□□□ 1.24
UBE2E2-201ENST00000335798 CATSPERGQ6ZRH7 1159 aa22.77■■□□□ 1.24
UBE2E2-201ENST00000335798 NUP88Q99567 741 aaPredicted RBP22.77■■□□□ 1.24
UBE2E2-201ENST00000335798 TROAPQ12815 778 aa22.76■■□□□ 1.23
UBE2E2-201ENST00000335798 FAM83BQ5T0W9 1011 aa22.76■■□□□ 1.23
UBE2E2-201ENST00000335798 Q6ZUG5 572 aa22.76■■□□□ 1.23
UBE2E2-201ENST00000335798 TMTC2Q8N394 836 aa22.76■■□□□ 1.23
UBE2E2-201ENST00000335798 DCAF4Q8WV16 495 aa22.76■■□□□ 1.23
UBE2E2-201ENST00000335798 ADGRA2Q96PE1 1338 aa22.75■■□□□ 1.23
UBE2E2-201ENST00000335798 USP17L15C9J2P7 530 aa22.75■■□□□ 1.23
UBE2E2-201ENST00000335798 USP17L13C9JLJ4 530 aa22.75■■□□□ 1.23
UBE2E2-201ENST00000335798 USP17L11C9JVI0 530 aa22.75■■□□□ 1.23
UBE2E2-201ENST00000335798 USP17L18D6R9N7 530 aa22.75■■□□□ 1.23
UBE2E2-201ENST00000335798 USP17L22D6RA61 530 aa22.75■■□□□ 1.23
UBE2E2-201ENST00000335798 USP17L17D6RBQ6 530 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms