RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 INF2Q27J81 1249 aa13.4□□□□□ -0.26
LIN28A-201ENST00000254231 NBPF12Q5TAG4 269 aaPredicted RBP13.4□□□□□ -0.26
LIN28A-201ENST00000254231 TMC4Q7Z404 712 aa13.4□□□□□ -0.26
LIN28A-201ENST00000254231 DRC7Q8IY82 874 aa13.4□□□□□ -0.26
LIN28A-201ENST00000254231 SLC16A10Q8TF71 515 aa13.4□□□□□ -0.26
LIN28A-201ENST00000254231 CCDC194A0A1B0GVG4 234 aa13.4□□□□□ -0.26
LIN28A-201ENST00000254231 HOXA13P31271 388 aaPredicted RBP13.4□□□□□ -0.26
LIN28A-201ENST00000254231 TANGO6Q9C0B7 1094 aa13.4□□□□□ -0.26
LIN28A-201ENST00000254231 ZNF70Q9UC06 446 aaPredicted RBP13.4□□□□□ -0.26
LIN28A-201ENST00000254231 CEP290O15078 2479 aa13.4□□□□□ -0.27
LIN28A-201ENST00000254231 THSD7AQ9UPZ6 1657 aa13.39□□□□□ -0.27
LIN28A-201ENST00000254231 USP17L10C9JJH3 530 aa13.39□□□□□ -0.27
LIN28A-201ENST00000254231 CLSTN1O94985 981 aa13.39□□□□□ -0.27
LIN28A-201ENST00000254231 KIF5BP33176 963 aa13.39□□□□□ -0.27
LIN28A-201ENST00000254231 TMTC2Q8N394 836 aa13.39□□□□□ -0.27
LIN28A-201ENST00000254231 MYOZ2Q9NPC6 264 aa13.39□□□□□ -0.27
LIN28A-201ENST00000254231 TMEM260Q9NX78 707 aa13.39□□□□□ -0.27
LIN28A-201ENST00000254231 PI4KBQ9UBF8 816 aa13.39□□□□□ -0.27
LIN28A-201ENST00000254231 PCDHB6Q9Y5E3 794 aa13.39□□□□□ -0.27
LIN28A-201ENST00000254231 KINO60870 393 aaKnown RBP13.39□□□□□ -0.27
LIN28A-201ENST00000254231 GRIN1Q05586 938 aa13.39□□□□□ -0.27
LIN28A-201ENST00000254231 EARS2Q5JPH6 523 aaKnown RBP13.39□□□□□ -0.27
LIN28A-201ENST00000254231 KLHL10Q6JEL2 608 aa13.39□□□□□ -0.27
LIN28A-201ENST00000254231 GRAMD1CQ8IYS0 662 aa13.39□□□□□ -0.27
LIN28A-201ENST00000254231 GGA3Q9NZ52 723 aa13.39□□□□□ -0.27
LIN28A-201ENST00000254231 ZBTB21Q9ULJ3 1066 aa13.39□□□□□ -0.27
LIN28A-201ENST00000254231 INPP5BP32019 993 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 CFAP45Q9UL16 551 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 MAPK8IP1Q9UQF2 711 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 USP17L15C9J2P7 530 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 USP17L13C9JLJ4 530 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 USP17L11C9JVI0 530 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 USP17L18D6R9N7 530 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 USP17L22D6RA61 530 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 USP17L17D6RBQ6 530 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 USP17L19D6RCP7 530 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 USP17L20D6RJB6 530 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 CFBP00751 764 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 JAG1P78504 1218 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 USP17L24Q0WX57 530 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 TROAPQ12815 778 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 ALX1Q15699 326 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 USP17L6PQ6QN14 398 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 ZNF396Q96N95 335 aaPredicted RBP13.38□□□□□ -0.27
LIN28A-201ENST00000254231 BRMS1Q9HCU9 246 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 PAPPAQ13219 1627 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 TNRC6CQ9HCJ0 1690 aaKnown RBP13.38□□□□□ -0.27
LIN28A-201ENST00000254231 DDIT3P35638 169 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 C9orf131Q5VYM1 1079 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 SLFN13Q68D06 897 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 SH3BP5LQ7L8J4 393 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 C7orf43Q8WVR3 580 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 KCNB2Q92953 911 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 HACL1Q9UJ83 578 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 MYH3P11055 1940 aa13.38□□□□□ -0.27
LIN28A-201ENST00000254231 ZNF541Q9H0D2 1346 aa13.37□□□□□ -0.27
LIN28A-201ENST00000254231 KLRG2A4D1S0 409 aaPredicted RBP13.37□□□□□ -0.27
LIN28A-201ENST00000254231 SPTLC2O15270 562 aa13.37□□□□□ -0.27
LIN28A-201ENST00000254231 MYSM1Q5VVJ2 828 aa13.37□□□□□ -0.27
LIN28A-201ENST00000254231 MAP1SQ66K74 1059 aaPredicted RBP13.37□□□□□ -0.27
LIN28A-201ENST00000254231 RCSD1Q6JBY9 416 aa13.37□□□□□ -0.27
LIN28A-201ENST00000254231 TRPM4Q8TD43 1214 aa13.37□□□□□ -0.27
LIN28A-201ENST00000254231 TRIM44Q96DX7 344 aaPredicted RBP13.37□□□□□ -0.27
LIN28A-201ENST00000254231 DDX39AO00148 427 aaKnown RBP13.37□□□□□ -0.27
LIN28A-201ENST00000254231 L1TD1Q5T7N2 865 aaKnown RBP13.37□□□□□ -0.27
LIN28A-201ENST00000254231 USP49Q70CQ1 688 aa13.37□□□□□ -0.27
LIN28A-201ENST00000254231 DEFB129Q9H1M3 183 aa13.37□□□□□ -0.27
LIN28A-201ENST00000254231 SPP2Q13103 211 aa13.37□□□□□ -0.27
LIN28A-201ENST00000254231 SH2D3AQ9BRG2 576 aa13.37□□□□□ -0.27
LIN28A-201ENST00000254231 ZNF341Q9BYN7 854 aa13.37□□□□□ -0.27
LIN28A-201ENST00000254231 NUP62CLQ9H1M0 184 aa13.37□□□□□ -0.27
LIN28A-201ENST00000254231 SMCO2A6NFE2 343 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 SPDYE2BA6NHP3 402 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 DEXIO95424 95 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 POTEIP0CG38 1075 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 POTEJP0CG39 1038 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 SPDYE6P0CI01 402 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 LIFRP42702 1097 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 CNKSR2Q8WXI2 1034 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 SLX4Q8IY92 1834 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 LMOD1P29536 600 aaPredicted RBP13.36□□□□□ -0.27
LIN28A-201ENST00000254231 KIF23Q02241 960 aaPredicted RBP13.36□□□□□ -0.27
LIN28A-201ENST00000254231 KIF4BQ2VIQ3 1234 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 SKOR2Q2VWA4 1001 aaPredicted RBP13.36□□□□□ -0.27
LIN28A-201ENST00000254231 EEPD1Q7L9B9 569 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 DHX58Q96C10 678 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 WRNIP1Q96S55 665 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 PAGR1Q9BTK6 254 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 SCAND2PQ9GZW5 306 aaPredicted RBP13.36□□□□□ -0.27
LIN28A-201ENST00000254231 MYH2Q9UKX2 1941 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 NASPP49321 788 aaPredicted RBP13.36□□□□□ -0.27
LIN28A-201ENST00000254231 RESTQ13127 1097 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 RRP1BQ14684 758 aaKnown RBP13.36□□□□□ -0.27
LIN28A-201ENST00000254231 SEC23AQ15436 765 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 KLHL40Q2TBA0 621 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 FAM83BQ5T0W9 1011 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 SYAP1Q96A49 352 aaPredicted RBP13.36□□□□□ -0.27
LIN28A-201ENST00000254231 PCDHA7Q9UN72 937 aa13.36□□□□□ -0.27
LIN28A-201ENST00000254231 NHSQ6T4R5 1651 aa13.35□□□□□ -0.27
LIN28A-201ENST00000254231 F5H6K3 240 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms