RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 FHOD1Q9Y613 1164 aa18.51■□□□□ 0.55
LTBR-201ENST00000228918 AKR1B15C9JRZ8 316 aaPredicted RBP18.5■□□□□ 0.55
LTBR-201ENST00000228918 PBX1P40424 430 aa18.5■□□□□ 0.55
LTBR-201ENST00000228918 ATP2C1P98194 919 aaPredicted RBP18.5■□□□□ 0.55
LTBR-201ENST00000228918 ZNF174Q15697 407 aa18.5■□□□□ 0.55
LTBR-201ENST00000228918 ERFEQ4G0M1 354 aa18.5■□□□□ 0.55
LTBR-201ENST00000228918 KLHL10Q6JEL2 608 aa18.5■□□□□ 0.55
LTBR-201ENST00000228918 BBXQ8WY36 941 aaPredicted RBP18.5■□□□□ 0.55
LTBR-201ENST00000228918 KIFC2Q96AC6 838 aa18.5■□□□□ 0.55
LTBR-201ENST00000228918 FAM84BQ96KN1 310 aaPredicted RBP18.5■□□□□ 0.55
LTBR-201ENST00000228918 STX17P56962 302 aa18.49■□□□□ 0.55
LTBR-201ENST00000228918 MAP3K9P80192 1104 aa18.49■□□□□ 0.55
LTBR-201ENST00000228918 DESI2Q9BSY9 194 aa18.49■□□□□ 0.55
LTBR-201ENST00000228918 ARGLU1Q9NWB6 273 aaPredicted RBP18.49■□□□□ 0.55
LTBR-201ENST00000228918 ADD3Q9UEY8 706 aaKnown RBP18.49■□□□□ 0.55
LTBR-201ENST00000228918 MRFAP1Q9Y605 127 aa18.49■□□□□ 0.55
LTBR-201ENST00000228918 SPATA31A1Q5TZJ5 1347 aa18.49■□□□□ 0.55
LTBR-201ENST00000228918 PPP1R3GB7ZBB8 358 aa18.49■□□□□ 0.55
LTBR-201ENST00000228918 SEMA3EO15041 775 aa18.49■□□□□ 0.55
LTBR-201ENST00000228918 ORC4O43929 436 aa18.49■□□□□ 0.55
LTBR-201ENST00000228918 TERF2Q15554 542 aa18.49■□□□□ 0.55
LTBR-201ENST00000228918 ZNF771Q7L3S4 317 aaPredicted RBP18.49■□□□□ 0.55
LTBR-201ENST00000228918 MARCH10Q8NA82 808 aaPredicted RBP18.49■□□□□ 0.55
LTBR-201ENST00000228918 MINPP1Q9UNW1 487 aa18.49■□□□□ 0.55
LTBR-201ENST00000228918 KIAA1551Q9HCM1 1747 aa18.49■□□□□ 0.55
LTBR-201ENST00000228918 USP17L12C9JPN9 530 aa18.48■□□□□ 0.55
LTBR-201ENST00000228918 USP17L21D6R901 530 aa18.48■□□□□ 0.55
LTBR-201ENST00000228918 ZRANB2O95218 330 aaKnown RBP eCLIP18.48■□□□□ 0.555e-8■■■■■ 51.3
LTBR-201ENST00000228918 PTGDRQ13258 359 aa18.48■□□□□ 0.55
LTBR-201ENST00000228918 MTF1Q14872 753 aa18.48■□□□□ 0.55
LTBR-201ENST00000228918 CLEC4GQ6UXB4 293 aa18.48■□□□□ 0.55
LTBR-201ENST00000228918 SMYD4Q8IYR2 804 aaPredicted RBP18.48■□□□□ 0.55
LTBR-201ENST00000228918 SRBD1Q8N5C6 995 aaKnown RBP18.48■□□□□ 0.55
LTBR-201ENST00000228918 MAST2Q6P0Q8 1798 aa18.48■□□□□ 0.55
LTBR-201ENST00000228918 TPM1P09493 284 aa18.48■□□□□ 0.55
LTBR-201ENST00000228918 PNMA6AP0CW24 399 aaPredicted RBP18.48■□□□□ 0.55
LTBR-201ENST00000228918 E2F4Q16254 413 aa18.48■□□□□ 0.55
LTBR-201ENST00000228918 IGSF22Q8N9C0 903 aa18.48■□□□□ 0.55
LTBR-201ENST00000228918 CTCFLQ8NI51 663 aaPredicted RBP18.48■□□□□ 0.55
LTBR-201ENST00000228918 NSUN4Q96CB9 384 aaKnown RBP18.48■□□□□ 0.55
LTBR-201ENST00000228918 CTAGE1Q96RT6 745 aa18.48■□□□□ 0.55
LTBR-201ENST00000228918 MRPL44Q9H9J2 332 aaKnown RBP18.48■□□□□ 0.55
LTBR-201ENST00000228918 BAZ2BQ9UIF8 2168 aaKnown RBP18.48■□□□□ 0.55
LTBR-201ENST00000228918 XDHP47989 1333 aa18.48■□□□□ 0.55
LTBR-201ENST00000228918 AHDC1Q5TGY3 1603 aaPredicted RBP18.47■□□□□ 0.55
LTBR-201ENST00000228918 SOWAHDA6NJG2 315 aa18.47■□□□□ 0.55
LTBR-201ENST00000228918 CCDC175P0C221 793 aa18.47■□□□□ 0.55
LTBR-201ENST00000228918 EVX2Q03828 476 aa18.47■□□□□ 0.55
LTBR-201ENST00000228918 NAA15Q9BXJ9 866 aaKnown RBP18.47■□□□□ 0.55
LTBR-201ENST00000228918 TMEM51Q9NW97 253 aa18.47■□□□□ 0.55
LTBR-201ENST00000228918 THRAP3Q9Y2W1 955 aaKnown RBP18.47■□□□□ 0.55
LTBR-201ENST00000228918 PPP2R3AQ06190 1150 aa18.47■□□□□ 0.55
LTBR-201ENST00000228918 RBL2Q08999 1139 aa18.47■□□□□ 0.55
LTBR-201ENST00000228918 KARSQ15046 597 aaKnown RBP18.47■□□□□ 0.55
LTBR-201ENST00000228918 TMCO3Q6UWJ1 677 aa18.47■□□□□ 0.55
LTBR-201ENST00000228918 PPFIBP1Q86W92 1011 aa18.47■□□□□ 0.55
LTBR-201ENST00000228918 NMT2O60551 498 aa18.46■□□□□ 0.55
LTBR-201ENST00000228918 TRAPPC10P48553 1259 aa18.46■□□□□ 0.55
LTBR-201ENST00000228918 RAD9BQ6WBX8 426 aa18.46■□□□□ 0.55
LTBR-201ENST00000228918 FBXO33Q7Z6M2 555 aa18.46■□□□□ 0.55
LTBR-201ENST00000228918 CELF1Q92879 486 aaKnown RBP18.46■□□□□ 0.55
LTBR-201ENST00000228918 ST7Q9NRC1 585 aa18.46■□□□□ 0.55
LTBR-201ENST00000228918 MFAP3LO75121 409 aa18.46■□□□□ 0.54
LTBR-201ENST00000228918 SCG2P13521 617 aa18.46■□□□□ 0.54
LTBR-201ENST00000228918 MECOMQ03112 1051 aa18.46■□□□□ 0.54
LTBR-201ENST00000228918 DCP1AQ9NPI6 582 aaPredicted RBP18.46■□□□□ 0.54
LTBR-201ENST00000228918 CTNND2Q9UQB3 1225 aa18.46■□□□□ 0.54
LTBR-201ENST00000228918 ADGRG1Q9Y653 693 aa18.46■□□□□ 0.54
LTBR-201ENST00000228918 PDS5AQ29RF7 1337 aaKnown RBP18.45■□□□□ 0.54
LTBR-201ENST00000228918 KLRK1P26718 216 aa18.45■□□□□ 0.54
LTBR-201ENST00000228918 FILIP1LQ4L180 1135 aa18.45■□□□□ 0.54
LTBR-201ENST00000228918 PDXDC2PQ6P474 469 aa18.45■□□□□ 0.54
LTBR-201ENST00000228918 PIK3AP1Q6ZUJ8 805 aa18.45■□□□□ 0.54
LTBR-201ENST00000228918 RSRC2Q7L4I2 434 aaKnown RBP18.45■□□□□ 0.54
LTBR-201ENST00000228918 IQUBQ8NA54 791 aa18.45■□□□□ 0.54
LTBR-201ENST00000228918 STAMQ92783 540 aa18.45■□□□□ 0.54
LTBR-201ENST00000228918 ITIH6Q6UXX5 1313 aa18.45■□□□□ 0.54
LTBR-201ENST00000228918 CCDC88AQ3V6T2 1871 aa18.45■□□□□ 0.54
LTBR-201ENST00000228918 PFKFB3Q16875 520 aaPredicted RBP18.44■□□□□ 0.54
LTBR-201ENST00000228918 CRNKL1Q9BZJ0 848 aaKnown RBP18.44■□□□□ 0.54
LTBR-201ENST00000228918 ZNF831Q5JPB2 1677 aa18.44■□□□□ 0.54
LTBR-201ENST00000228918 PLA2G4AP47712 749 aa18.44■□□□□ 0.54
LTBR-201ENST00000228918 NLRP5P59047 1200 aa18.44■□□□□ 0.54
LTBR-201ENST00000228918 FAM47AQ5JRC9 791 aa18.44■□□□□ 0.54
LTBR-201ENST00000228918 GPR161Q8N6U8 529 aaKnown RBP18.44■□□□□ 0.54
LTBR-201ENST00000228918 CCDC12Q8WUD4 166 aaPredicted RBP18.44■□□□□ 0.54
LTBR-201ENST00000228918 PYM1Q9BRP8 204 aaKnown RBP18.44■□□□□ 0.54
LTBR-201ENST00000228918 BLZF1Q9H2G9 400 aa18.44■□□□□ 0.54
LTBR-201ENST00000228918 MYH8P13535 1937 aa18.44■□□□□ 0.54
LTBR-201ENST00000228918 GTPBP6O43824 516 aaPredicted RBP18.43■□□□□ 0.54
LTBR-201ENST00000228918 GYPCP04921 128 aa18.43■□□□□ 0.54
LTBR-201ENST00000228918 FECHP22830 423 aa18.43■□□□□ 0.54
LTBR-201ENST00000228918 IL17AQ16552 155 aa18.43■□□□□ 0.54
LTBR-201ENST00000228918 CPLX3Q8WVH0 158 aa18.43■□□□□ 0.54
LTBR-201ENST00000228918 MTRQ99707 1265 aa18.43■□□□□ 0.54
LTBR-201ENST00000228918 ATP8A2Q9NTI2 1148 aa18.43■□□□□ 0.54
LTBR-201ENST00000228918 ARPP21Q9UBL0 812 aaPredicted RBP18.43■□□□□ 0.54
LTBR-201ENST00000228918 CYP2D6P10635 497 aa18.43■□□□□ 0.54
LTBR-201ENST00000228918 CASP14P31944 242 aa18.43■□□□□ 0.54
LTBR-201ENST00000228918 CNGA4Q8IV77 575 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms