RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 ARHGEF10LQ9HCE6 1279 aa11.86□□□□□ -0.51
CD9-201ENST00000009180 TCP11L1Q9NUJ3 509 aa11.86□□□□□ -0.51
CD9-201ENST00000009180 NYAP2Q9P242 653 aa11.86□□□□□ -0.51
CD9-201ENST00000009180 MTMR7Q9Y216 660 aa11.86□□□□□ -0.51
CD9-201ENST00000009180 LOC285556D6RIA3 1793 aa11.85□□□□□ -0.51
CD9-201ENST00000009180 IGF2BP3O00425 579 aaKnown RBP eCLIP11.85□□□□□ -0.51
CD9-201ENST00000009180 CXCL11O14625 94 aa11.85□□□□□ -0.51
CD9-201ENST00000009180 TTLL1O95922 423 aa11.85□□□□□ -0.51
CD9-201ENST00000009180 CETPP11597 493 aa11.85□□□□□ -0.51
CD9-201ENST00000009180 CASTP20810 708 aaKnown RBP11.85□□□□□ -0.51
CD9-201ENST00000009180 NOVP48745 357 aa11.85□□□□□ -0.51
CD9-201ENST00000009180 KRT32Q14532 448 aa11.85□□□□□ -0.51
CD9-201ENST00000009180 SEC23AQ15436 765 aa11.85□□□□□ -0.51
CD9-201ENST00000009180 GPAT2Q6NUI2 795 aa11.85□□□□□ -0.51
CD9-201ENST00000009180 IQCA1Q86XH1 822 aa11.85□□□□□ -0.51
CD9-201ENST00000009180 SPICE1Q8N0Z3 855 aa11.85□□□□□ -0.51
CD9-201ENST00000009180 NUP88Q99567 741 aaPredicted RBP11.85□□□□□ -0.51
CD9-201ENST00000009180 PTPN18Q99952 460 aa11.85□□□□□ -0.51
CD9-201ENST00000009180 TBC1D2Q9BYX2 928 aa11.85□□□□□ -0.51
CD9-201ENST00000009180 UPF3BQ9BZI7 483 aaKnown RBP11.85□□□□□ -0.51
CD9-201ENST00000009180 KIAA1683Q9H0B3 1180 aa11.85□□□□□ -0.51
CD9-201ENST00000009180 EMILIN3Q9NT22 766 aa11.85□□□□□ -0.51
CD9-201ENST00000009180 TMX2Q9Y320 296 aa11.85□□□□□ -0.51
CD9-201ENST00000009180 PTPRFP10586 1907 aa11.84□□□□□ -0.51
CD9-201ENST00000009180 MANSC4A6NHS7 340 aaPredicted RBP11.84□□□□□ -0.51
CD9-201ENST00000009180 BTBD19C9JJ37 291 aa11.84□□□□□ -0.51
CD9-201ENST00000009180 IFIT3O14879 490 aaKnown RBP11.84□□□□□ -0.51
CD9-201ENST00000009180 EIF5BO60841 1220 aaKnown RBP11.84□□□□□ -0.51
CD9-201ENST00000009180 VCAM1P19320 739 aa11.84□□□□□ -0.51
CD9-201ENST00000009180 MCM5P33992 734 aa11.84□□□□□ -0.51
CD9-201ENST00000009180 TMEM67Q5HYA8 995 aa11.84□□□□□ -0.51
CD9-201ENST00000009180 SH3D19Q5HYK7 790 aa11.84□□□□□ -0.51
CD9-201ENST00000009180 BLOC1S2Q6QNY1 142 aa11.84□□□□□ -0.51
CD9-201ENST00000009180 USP17L2Q6R6M4 530 aa11.84□□□□□ -0.51
CD9-201ENST00000009180 FAM43AQ8N2R8 423 aa11.84□□□□□ -0.51
CD9-201ENST00000009180 TMEM47Q9BQJ4 181 aa11.84□□□□□ -0.51
CD9-201ENST00000009180 C22orf23Q9BZE7 217 aa11.84□□□□□ -0.51
CD9-201ENST00000009180 SH2D4AQ9H788 454 aa11.84□□□□□ -0.51
CD9-201ENST00000009180 VCPKMTQ9H867 229 aa11.84□□□□□ -0.51
CD9-201ENST00000009180 TESPA1A2RU30 521 aaPredicted RBP11.83□□□□□ -0.52
CD9-201ENST00000009180 SH2B2O14492 632 aaPredicted RBP11.83□□□□□ -0.52
CD9-201ENST00000009180 NDUFB10O96000 172 aa11.83□□□□□ -0.52
CD9-201ENST00000009180 RPS6KB1P23443 525 aa11.83□□□□□ -0.52
CD9-201ENST00000009180 EXOSC10Q01780 885 aaKnown RBP11.83□□□□□ -0.52
CD9-201ENST00000009180 SREBF2Q12772 1141 aa11.83□□□□□ -0.52
CD9-201ENST00000009180 IFIT1BQ5T764 474 aaKnown RBP11.83□□□□□ -0.52
CD9-201ENST00000009180 DHX32Q7L7V1 743 aaKnown RBP11.83□□□□□ -0.52
CD9-201ENST00000009180 IGDCC4Q8TDY8 1250 aa11.83□□□□□ -0.52
CD9-201ENST00000009180 LY9Q9HBG7 655 aa11.83□□□□□ -0.52
CD9-201ENST00000009180 TMOD4Q9NZQ9 345 aa11.83□□□□□ -0.52
CD9-201ENST00000009180 PCNTO95613 3336 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 C19orf81C9J6K1 198 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 F5H6K3 240 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 TOP1P11387 765 aaKnown RBP11.82□□□□□ -0.52
CD9-201ENST00000009180 PSMA5P28066 241 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 NT5C2P49902 561 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 USP14P54578 494 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 ANAPC15P60006 121 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 KLRC3Q07444 240 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 WTAPQ15007 396 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 FAM83BQ5T0W9 1011 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 SLFN13Q68D06 897 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 Q6ZUG5 572 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 FASTKD5Q7L8L6 764 aaKnown RBP11.82□□□□□ -0.52
CD9-201ENST00000009180 DGKHQ86XP1 1220 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 RAB11FIP4Q86YS3 637 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 IFNL1Q8IU54 200 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 PROCA1Q8NCQ7 364 aaPredicted RBP11.82□□□□□ -0.52
CD9-201ENST00000009180 PNMA1Q8ND90 353 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 MKL1Q969V6 931 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 C12orf42Q96LP6 360 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 TBC1D32Q96NH3 1257 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 KIF2CQ99661 725 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 MYL10Q9BUA6 226 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 RPAP3Q9H6T3 665 aaPredicted RBP11.82□□□□□ -0.52
CD9-201ENST00000009180 KAT14Q9H8E8 782 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 UPF2Q9HAU5 1272 aaKnown RBP11.82□□□□□ -0.52
CD9-201ENST00000009180 ZSWIM6Q9HCJ5 1215 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 GOPCQ9HD26 462 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 ISY1Q9ULR0 285 aaKnown RBP11.82□□□□□ -0.52
CD9-201ENST00000009180 AGTPBP1Q9UPW5 1226 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 MYH4Q9Y623 1939 aa11.82□□□□□ -0.52
CD9-201ENST00000009180 ERICH2A1L162 156 aa11.81□□□□□ -0.52
CD9-201ENST00000009180 PDHXO00330 501 aa11.81□□□□□ -0.52
CD9-201ENST00000009180 HMGB1P09429 215 aaKnown RBP11.81□□□□□ -0.52
CD9-201ENST00000009180 MAP2K2P36507 400 aa11.81□□□□□ -0.52
CD9-201ENST00000009180 TM4SF4P48230 202 aa11.81□□□□□ -0.52
CD9-201ENST00000009180 RBM25P49756 843 aaKnown RBP11.81□□□□□ -0.52
CD9-201ENST00000009180 MKRN4PQ13434 485 aaPredicted RBP11.81□□□□□ -0.52
CD9-201ENST00000009180 SART3Q15020 963 aaKnown RBP11.81□□□□□ -0.52
CD9-201ENST00000009180 CCDC178Q5BJE1 867 aa11.81□□□□□ -0.52
CD9-201ENST00000009180 PPP4R3BQ5MIZ7 849 aa11.81□□□□□ -0.52
CD9-201ENST00000009180 RUFY3Q7L099 469 aa11.81□□□□□ -0.52
CD9-201ENST00000009180 ANKRD23Q86SG2 305 aa11.81□□□□□ -0.52
CD9-201ENST00000009180 GMCL1P1Q8NEA9 526 aa11.81□□□□□ -0.52
CD9-201ENST00000009180 ANKS1AQ92625 1134 aa11.81□□□□□ -0.52
CD9-201ENST00000009180 IL17RAQ96F46 866 aa11.81□□□□□ -0.52
CD9-201ENST00000009180 TTC14Q96N46 770 aa11.81□□□□□ -0.52
CD9-201ENST00000009180 LARP6Q9BRS8 491 aaKnown RBP11.81□□□□□ -0.52
CD9-201ENST00000009180 TM6SF1Q9BZW5 370 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms