RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Cyp2c40P56657 491 aa8.89□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Wdr70Q3TWF6 657 aa8.89□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Ube2oQ6ZPJ3 1288 aa8.89□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Ano10Q8BH79 659 aa8.89□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Trmt2aQ8BNV1 574 aaKnown RBP8.89□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Taf1dQ9D4V4 322 aa8.89□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Igsf9bE9PZ19 1328 aa8.89□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Ppef2O35385 757 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Parp2O88554 559 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Lrrc36Q3V0M2 755 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Mei1Q9D4I2 1268 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Large1Q9Z1M7 756 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Pfkfb3A7UAK5 555 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Psmd14O35593 310 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 U2af2P26369 475 aaKnown RBP8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Hvcn1Q3U2S8 269 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Ankrd40Q5SUE8 363 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 March6Q6ZQ89 909 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Tas2r124Q7M718 309 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Q8BZJ8 459 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Tspyl4Q8VD63 406 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 LpxnQ99N69 386 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Chaf1aQ9QWF0 911 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Marf1Q8BJ34 1730 aaKnown RBP8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Flvcr1B2RXV4 560 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Slc39a2G3X943 309 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Kcna1P16388 495 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Cfap157Q0VFX2 523 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Nsrp1Q5NCR9 542 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Rhpn1Q61085 643 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Slc9a1Q61165 820 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 WaplQ65Z40 1200 aaKnown RBP8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Cep85Q8BMK0 761 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Ppp1r11Q8K1L5 131 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Golph3lQ8R088 285 aaKnown RBP8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Washc1Q8VDD8 475 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Mtmr4Q91XS1 1190 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Nrbp1Q99J45 535 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Cd2apQ9JLQ0 637 aa8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Ccnt1Q9QWV9 724 aaKnown RBP8.88□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Prss51A0A286YDY8 319 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Apol7aB2RT54 418 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Mars2Q499X9 586 aaKnown RBP8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 RragbQ6NTA4 374 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Ccdc172Q810N9 267 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Slc18a1Q8R090 521 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Hs2st1Q8R3H7 356 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Apobec3Q99J72 440 aaKnown RBP8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Tob2Q9JM55 345 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Nhsl1Q8CAF4 1587 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Heg1E9Q7X6 1337 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Pde4aO89084 844 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 SsbP32067 415 aaKnown RBP8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 AaasP58742 546 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 EgfrQ01279 1210 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Nell2Q61220 819 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Ces1Q8VCC2 565 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Gnl2Q99LH1 728 aaKnown RBP8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Snw1Q9CSN1 536 aaKnown RBP8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Saal1Q9D2C2 474 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Tmem191cQ9JJB1 302 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Azi2Q9QYP6 405 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Gm7356A0A087WSA6 508 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Glt1d1A4FUP9 346 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Arid4aF8VPQ2 1261 aaKnown RBP8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Nbr1P97432 988 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Ccdc162pQ0VG85 912 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Cnga2Q62398 664 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Gpbp1Q6NXH3 473 aaKnown RBP8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 PigsQ6PD26 555 aaKnown RBP8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Lrrc15Q80X72 579 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Myh2G3UW82 1942 aa8.87□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Shank3Q4ACU6 1730 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Nlrp2Q4PLS0 1046 aaKnown RBP8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Senp6Q6P7W0 1132 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Tmem39bQ810L4 492 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Frmd3Q8BHD4 595 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Tango6Q8C3S2 1079 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Trex1Q91XB0 314 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 EhhadhQ9DBM2 718 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Eif4enif1Q9EST3 983 aaKnown RBP8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Rbm6S4R1W5 1118 aaKnown RBP8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Wdr19Q3UGF1 1341 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Psen2Q61144 448 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Prkag3Q8BGM7 489 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Trpc5Q9QX29 975 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Duox1A2AQ92 1551 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Mageb2A2AHM0 380 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Nf2P46662 596 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Prl2c1Q5SVL9 228 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Mtss1lQ6P9S0 715 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Gm2163Q6PCY5 473 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Tmc4Q7TQ65 694 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Arhgef6Q8K4I3 771 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Bst2Q8R2Q8 172 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Lzts2Q91YU6 671 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Myo1hQ9D6A1 958 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 NapaQ9DB05 295 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Pex3Q9QXY9 372 aa8.86□□□□□ -0.99
Ccdc39-201ENSMUST00000029222 Sorbs3Q9R1Z8 733 aa8.86□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms