RNA–Protein interactions for RNA: ENST00000623256.3

LINC01727-202, Transcript of long intergenic non-protein coding RNA 1727, humanhuman

TSL 4 BASIC

Gene LINC01727, Length 1,218 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01727-202ENST00000623256 ERVK-9P63128 1117 aa11.18□□□□□ -0.62
LINC01727-202ENST00000623256 ERVK-24P63145 666 aa11.18□□□□□ -0.62
LINC01727-202ENST00000623256 DYNLL1P63167 89 aaKnown RBP11.18□□□□□ -0.62
LINC01727-202ENST00000623256 LRIT3Q3SXY7 679 aa11.18□□□□□ -0.62
LINC01727-202ENST00000623256 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
LINC01727-202ENST00000623256 GPR142Q7Z601 462 aa11.18□□□□□ -0.62
LINC01727-202ENST00000623256 FOXP4Q8IVH2 680 aaPredicted RBP11.18□□□□□ -0.62
LINC01727-202ENST00000623256 CLUAP1Q96AJ1 413 aa11.18□□□□□ -0.62
LINC01727-202ENST00000623256 NUDT12Q9BQG2 462 aa11.18□□□□□ -0.62
LINC01727-202ENST00000623256 SAP30BPQ9UHR5 308 aaKnown RBP11.18□□□□□ -0.62
LINC01727-202ENST00000623256 LAMA2P24043 3122 aaKnown RBP11.18□□□□□ -0.62
LINC01727-202ENST00000623256 CDK5RAP2Q96SN8 1893 aa11.17□□□□□ -0.62
LINC01727-202ENST00000623256 FOCADQ5VW36 1801 aa11.17□□□□□ -0.62
LINC01727-202ENST00000623256 ZKSCAN1P17029 563 aaPredicted RBP11.17□□□□□ -0.62
LINC01727-202ENST00000623256 MAPK4P31152 587 aa11.17□□□□□ -0.62
LINC01727-202ENST00000623256 ZAP70P43403 619 aa11.17□□□□□ -0.62
LINC01727-202ENST00000623256 LRRC26Q2I0M4 334 aa11.17□□□□□ -0.62
LINC01727-202ENST00000623256 TTC39AQ5SRH9 613 aa11.17□□□□□ -0.62
LINC01727-202ENST00000623256 TDHQ8IZJ6 230 aa11.17□□□□□ -0.62
LINC01727-202ENST00000623256 CRACR2BQ8N4Y2 399 aaPredicted RBP11.17□□□□□ -0.62
LINC01727-202ENST00000623256 TMEM57Q8N5G2 664 aa11.17□□□□□ -0.62
LINC01727-202ENST00000623256 DEFB123Q8N688 67 aa11.17□□□□□ -0.62
LINC01727-202ENST00000623256 SSH3Q8TE77 659 aa11.17□□□□□ -0.62
LINC01727-202ENST00000623256 ZNF512BQ96KM6 892 aaPredicted RBP11.17□□□□□ -0.62
LINC01727-202ENST00000623256 NOL10Q9BSC4 688 aaKnown RBP11.17□□□□□ -0.62
LINC01727-202ENST00000623256 PAGR1Q9BTK6 254 aa11.17□□□□□ -0.62
LINC01727-202ENST00000623256 GINM1Q9NU53 330 aa11.17□□□□□ -0.62
LINC01727-202ENST00000623256 TLR7Q9NYK1 1049 aaKnown RBP11.17□□□□□ -0.62
LINC01727-202ENST00000623256 DBNLQ9UJU6 430 aaKnown RBP11.17□□□□□ -0.62
LINC01727-202ENST00000623256 DNAH12Q6ZR08 3092 aa11.17□□□□□ -0.62
LINC01727-202ENST00000623256 GH2P01242 217 aa11.16□□□□□ -0.62
LINC01727-202ENST00000623256 RGS2P41220 211 aa11.16□□□□□ -0.62
LINC01727-202ENST00000623256 PDE3AQ14432 1141 aa11.16□□□□□ -0.62
LINC01727-202ENST00000623256 TATDN1Q6P1N9 297 aa11.16□□□□□ -0.62
LINC01727-202ENST00000623256 USP17L2Q6R6M4 530 aa11.16□□□□□ -0.62
LINC01727-202ENST00000623256 PLEKHH3Q7Z736 793 aa11.16□□□□□ -0.62
LINC01727-202ENST00000623256 TRMT44Q8IYL2 757 aaKnown RBP11.16□□□□□ -0.62
LINC01727-202ENST00000623256 FRAT1Q92837 279 aaPredicted RBP11.16□□□□□ -0.62
LINC01727-202ENST00000623256 C12orf42Q96LP6 360 aa11.16□□□□□ -0.62
LINC01727-202ENST00000623256 APBA2Q99767 749 aa11.16□□□□□ -0.62
LINC01727-202ENST00000623256 MTMR10Q9NXD2 777 aa11.16□□□□□ -0.62
LINC01727-202ENST00000623256 FLRT1Q9NZU1 646 aa11.16□□□□□ -0.62
LINC01727-202ENST00000623256 TRPC6Q9Y210 931 aa11.16□□□□□ -0.62
LINC01727-202ENST00000623256 IPO8O15397 1037 aaKnown RBP11.15□□□□□ -0.62
LINC01727-202ENST00000623256 IGHA2P01877 340 aa11.15□□□□□ -0.62
LINC01727-202ENST00000623256 CYP7A1P22680 504 aa11.15□□□□□ -0.62
LINC01727-202ENST00000623256 ATP8B2P98198 1209 aa11.15□□□□□ -0.62
LINC01727-202ENST00000623256 CCDC158Q5M9N0 1113 aa11.15□□□□□ -0.62
LINC01727-202ENST00000623256 MIGA1Q8NAN2 632 aa11.15□□□□□ -0.62
LINC01727-202ENST00000623256 GTF3C2Q8WUA4 911 aaPredicted RBP11.15□□□□□ -0.62
LINC01727-202ENST00000623256 UBE2OQ9C0C9 1292 aaKnown RBP11.15□□□□□ -0.62
LINC01727-202ENST00000623256 C1orf115Q9H7X2 142 aa11.15□□□□□ -0.62
LINC01727-202ENST00000623256 NDUFB9Q9Y6M9 179 aa11.15□□□□□ -0.62
LINC01727-202ENST00000623256 IGSF3O75054 1194 aa11.14□□□□□ -0.63
LINC01727-202ENST00000623256 SURF6O75683 361 aaKnown RBP11.14□□□□□ -0.63
LINC01727-202ENST00000623256 HLA-DOAP06340 250 aa11.14□□□□□ -0.63
LINC01727-202ENST00000623256 MAP2K5Q13163 448 aa11.14□□□□□ -0.63
LINC01727-202ENST00000623256 ZYXQ15942 572 aaKnown RBP11.14□□□□□ -0.63
LINC01727-202ENST00000623256 ACER1Q8TDN7 264 aa11.14□□□□□ -0.63
LINC01727-202ENST00000623256 EAF2Q96CJ1 260 aaPredicted RBP11.14□□□□□ -0.63
LINC01727-202ENST00000623256 TRIM34Q9BYJ4 488 aa11.14□□□□□ -0.63
LINC01727-202ENST00000623256 ANTXR1Q9H6X2 564 aa11.14□□□□□ -0.63
LINC01727-202ENST00000623256 BTBD7Q9P203 1132 aa11.14□□□□□ -0.63
LINC01727-202ENST00000623256 STXBP5LQ9Y2K9 1186 aa11.14□□□□□ -0.63
LINC01727-202ENST00000623256 NOP58Q9Y2X3 529 aaKnown RBP11.14□□□□□ -0.63
LINC01727-202ENST00000623256 RABGAP1Q9Y3P9 1069 aa11.14□□□□□ -0.63
LINC01727-202ENST00000623256 MYO5AQ9Y4I1 1855 aaKnown RBP11.14□□□□□ -0.63
LINC01727-202ENST00000623256 USP17L15C9J2P7 530 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 USP17L13C9JLJ4 530 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 USP17L11C9JVI0 530 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 USP17L18D6R9N7 530 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 USP17L22D6RA61 530 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 USP17L17D6RBQ6 530 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 USP17L19D6RCP7 530 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 USP17L20D6RJB6 530 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 VCAM1P19320 739 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 GUCY1A2P33402 732 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 SHMT1P34896 483 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 MDM2Q00987 491 aaPredicted RBP11.13□□□□□ -0.63
LINC01727-202ENST00000623256 USP17L24Q0WX57 530 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 CATSPERGQ6ZRH7 1159 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 TRPV1Q8NER1 839 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 EDC3Q96F86 508 aaKnown RBP11.13□□□□□ -0.63
LINC01727-202ENST00000623256 KIAA1683Q9H0B3 1180 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 CCDC8Q9H0W5 538 aaPredicted RBP11.13□□□□□ -0.63
LINC01727-202ENST00000623256 EHD4Q9H223 541 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 SERPINB13Q9UIV8 391 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 VCANP13611 3396 aa11.13□□□□□ -0.63
LINC01727-202ENST00000623256 EYSQ5T1H1 3165 aa11.12□□□□□ -0.63
LINC01727-202ENST00000623256 SPDYE16A6NNV3 312 aaPredicted RBP11.12□□□□□ -0.63
LINC01727-202ENST00000623256 IDH1O75874 414 aaKnown RBP11.12□□□□□ -0.63
LINC01727-202ENST00000623256 HOXC6P09630 235 aa11.12□□□□□ -0.63
LINC01727-202ENST00000623256 RLBP1P12271 317 aa11.12□□□□□ -0.63
LINC01727-202ENST00000623256 PTPREP23469 700 aa11.12□□□□□ -0.63
LINC01727-202ENST00000623256 PLCD1P51178 756 aa11.12□□□□□ -0.63
LINC01727-202ENST00000623256 OS9Q13438 667 aaPredicted RBP11.12□□□□□ -0.63
LINC01727-202ENST00000623256 GRB14Q14449 540 aa11.12□□□□□ -0.63
LINC01727-202ENST00000623256 RAB3GAP1Q15042 981 aa11.12□□□□□ -0.63
LINC01727-202ENST00000623256 LBX2Q6XYB7 198 aa11.12□□□□□ -0.63
LINC01727-202ENST00000623256 CCAR1Q8IX12 1150 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms