RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 SCYL3Q8IZE3 742 aa6.74□□□□□ -1.33
CBWD3-215ENST00000619322 CLUAP1Q96AJ1 413 aa6.74□□□□□ -1.33
CBWD3-215ENST00000619322 OCSTAMPQ9BR26 566 aa6.74□□□□□ -1.33
CBWD3-215ENST00000619322 GLIS2Q9BZE0 524 aaPredicted RBP6.74□□□□□ -1.33
CBWD3-215ENST00000619322 AGTPBP1Q9UPW5 1226 aa6.74□□□□□ -1.33
CBWD3-215ENST00000619322 AKAP2Q9Y2D5 859 aa6.74□□□□□ -1.33
CBWD3-215ENST00000619322 Q9Y3F1 56 aa6.74□□□□□ -1.33
CBWD3-215ENST00000619322 EYA2O00167 538 aa6.73□□□□□ -1.33
CBWD3-215ENST00000619322 ZBTB7BO15156 539 aaPredicted RBP6.73□□□□□ -1.33
CBWD3-215ENST00000619322 SLC5A1P13866 664 aa6.73□□□□□ -1.33
CBWD3-215ENST00000619322 RASIP1Q5U651 963 aa6.73□□□□□ -1.33
CBWD3-215ENST00000619322 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.73□□□□□ -1.33
CBWD3-215ENST00000619322 PRR14Q9BWN1 585 aa6.73□□□□□ -1.33
CBWD3-215ENST00000619322 PRKD2Q9BZL6 878 aa6.73□□□□□ -1.33
CBWD3-215ENST00000619322 NLRC5Q86WI3 1866 aa6.73□□□□□ -1.33
CBWD3-215ENST00000619322 KIF26AQ9ULI4 1882 aaPredicted RBP6.73□□□□□ -1.33
CBWD3-215ENST00000619322 OAZ1P54368 228 aa6.73□□□□□ -1.33
CBWD3-215ENST00000619322 CNGB1Q14028 1251 aaPredicted RBP6.73□□□□□ -1.33
CBWD3-215ENST00000619322 PPP2R2DQ66LE6 453 aa6.73□□□□□ -1.33
CBWD3-215ENST00000619322 BICDL1Q6ZP65 573 aa6.73□□□□□ -1.33
CBWD3-215ENST00000619322 SMIM5Q71RC9 77 aa6.73□□□□□ -1.33
CBWD3-215ENST00000619322 USP48Q86UV5 1035 aa6.73□□□□□ -1.33
CBWD3-215ENST00000619322 PPP1R12BO60237 982 aaPredicted RBP6.73□□□□□ -1.33
CBWD3-215ENST00000619322 HUNKP57058 714 aa6.73□□□□□ -1.33
CBWD3-215ENST00000619322 IFIT5Q13325 482 aaKnown RBP6.73□□□□□ -1.33
CBWD3-215ENST00000619322 MAP1SQ66K74 1059 aaPredicted RBP6.73□□□□□ -1.33
CBWD3-215ENST00000619322 PCMTD1Q96MG8 357 aaPredicted RBP6.73□□□□□ -1.33
CBWD3-215ENST00000619322 BCL2L13Q9BXK5 485 aa6.73□□□□□ -1.33
CBWD3-215ENST00000619322 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.73□□□□□ -1.33
CBWD3-215ENST00000619322 SRRDQ9UH36 339 aa6.73□□□□□ -1.33
CBWD3-215ENST00000619322 F12P00748 615 aaPredicted RBP6.72□□□□□ -1.33
CBWD3-215ENST00000619322 LACTBP83111 547 aaPredicted RBP6.72□□□□□ -1.33
CBWD3-215ENST00000619322 TMEM132AQ24JP5 1023 aa6.72□□□□□ -1.33
CBWD3-215ENST00000619322 MB21D1Q8N884 522 aa6.72□□□□□ -1.33
CBWD3-215ENST00000619322 SSH3Q8TE77 659 aa6.72□□□□□ -1.33
CBWD3-215ENST00000619322 FAM89AQ96GI7 184 aa6.72□□□□□ -1.33
CBWD3-215ENST00000619322 MYD88Q99836 296 aa6.72□□□□□ -1.33
CBWD3-215ENST00000619322 ANGEL2Q5VTE6 544 aaKnown RBP6.72□□□□□ -1.33
CBWD3-215ENST00000619322 CYP4F22Q6NT55 531 aa6.72□□□□□ -1.33
CBWD3-215ENST00000619322 OGFOD1Q8N543 542 aa6.72□□□□□ -1.33
CBWD3-215ENST00000619322 ZNF296Q8WUU4 475 aaPredicted RBP6.72□□□□□ -1.33
CBWD3-215ENST00000619322 BORCS6Q96GS4 357 aa6.72□□□□□ -1.33
CBWD3-215ENST00000619322 SRCIN1Q9C0H9 1055 aa6.72□□□□□ -1.33
CBWD3-215ENST00000619322 NEFLP07196 543 aa6.71□□□□□ -1.33
CBWD3-215ENST00000619322 FGRP09769 529 aa6.71□□□□□ -1.33
CBWD3-215ENST00000619322 CTHP32929 405 aa6.71□□□□□ -1.33
CBWD3-215ENST00000619322 CRKP46108 304 aa6.71□□□□□ -1.33
CBWD3-215ENST00000619322 PTPN12Q05209 780 aaKnown RBP6.71□□□□□ -1.33
CBWD3-215ENST00000619322 MCM6Q14566 821 aa6.71□□□□□ -1.33
CBWD3-215ENST00000619322 COL19A1Q14993 1142 aa6.71□□□□□ -1.33
CBWD3-215ENST00000619322 MSS51Q4VC12 460 aa6.71□□□□□ -1.33
CBWD3-215ENST00000619322 SCN10AQ9Y5Y9 1956 aa6.71□□□□□ -1.34
CBWD3-215ENST00000619322 GNAI3P08754 354 aa6.71□□□□□ -1.34
CBWD3-215ENST00000619322 JUNDP17535 347 aa6.71□□□□□ -1.34
CBWD3-215ENST00000619322 HIBADHP31937 336 aaKnown RBP6.71□□□□□ -1.34
CBWD3-215ENST00000619322 DCTN1Q14203 1278 aa6.71□□□□□ -1.34
CBWD3-215ENST00000619322 TEKT1Q969V4 418 aa6.71□□□□□ -1.34
CBWD3-215ENST00000619322 PCP11498 1178 aaKnown RBP6.71□□□□□ -1.34
CBWD3-215ENST00000619322 RHBDL3P58872 404 aa6.71□□□□□ -1.34
CBWD3-215ENST00000619322 PTPN11Q06124 597 aaPredicted RBP6.71□□□□□ -1.34
CBWD3-215ENST00000619322 GABPAQ06546 454 aa6.71□□□□□ -1.34
CBWD3-215ENST00000619322 DLGAP5Q15398 846 aa6.71□□□□□ -1.34
CBWD3-215ENST00000619322 CCDC96Q2M329 555 aa6.71□□□□□ -1.34
CBWD3-215ENST00000619322 CFAP100Q494V2 611 aa6.71□□□□□ -1.34
CBWD3-215ENST00000619322 NBPF11Q86T75 865 aa6.71□□□□□ -1.34
CBWD3-215ENST00000619322 DZIP1LQ8IYY4 767 aaKnown RBP6.71□□□□□ -1.34
CBWD3-215ENST00000619322 SLC43A3Q8NBI5 491 aa6.71□□□□□ -1.34
CBWD3-215ENST00000619322 RSPH1Q8WYR4 309 aa6.71□□□□□ -1.34
CBWD3-215ENST00000619322 GDPD2Q9HCC8 539 aa6.71□□□□□ -1.34
CBWD3-215ENST00000619322 GOPCQ9HD26 462 aa6.71□□□□□ -1.34
CBWD3-215ENST00000619322 ZMYM2Q9UBW7 1377 aa6.71□□□□□ -1.34
CBWD3-215ENST00000619322 ZNF157P51786 506 aaPredicted RBP6.7□□□□□ -1.34
CBWD3-215ENST00000619322 SP3Q02447 781 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 MVPQ14764 893 aaKnown RBP6.7□□□□□ -1.34
CBWD3-215ENST00000619322 BRI3BPQ8WY22 251 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 TRIM47Q96LD4 638 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 HTATIP2Q9BUP3 242 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 UNC93B1Q9H1C4 597 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 PI4KAP2A4QPH2 592 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 IGF2BP3O00425 579 aaKnown RBP eCLIP6.7□□□□□ -1.34
CBWD3-215ENST00000619322 LCE2BO14633 110 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 WDHD1O75717 1129 aaPredicted RBP6.7□□□□□ -1.34
CBWD3-215ENST00000619322 SMAD3P84022 425 aaKnown RBP6.7□□□□□ -1.34
CBWD3-215ENST00000619322 DGKZQ13574 1117 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 TKFCQ3LXA3 575 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 SBK1Q52WX2 424 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 LYPD8Q6UX82 237 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 FOXP4Q8IVH2 680 aaPredicted RBP6.7□□□□□ -1.34
CBWD3-215ENST00000619322 PI4KAP1Q8N8J0 262 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 AS3MTQ9HBK9 375 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 SWAP70Q9UH65 585 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 ADM5C9JUS6 153 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 LDHCP07864 332 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 BAP1Q92560 729 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 FOXJ1Q92949 421 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 USP44Q9H0E7 712 aa6.7□□□□□ -1.34
CBWD3-215ENST00000619322 SLC15A5A6NIM6 579 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 C1RP00736 705 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 TRIM32Q13049 653 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 B4GALNT3Q6L9W6 998 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms