RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 AMOTL2Q9Y2J4 779 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 hCG_2014768A0A024R1R8 64 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 BLZF1Q9H2G9 400 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 NCOA2Q15596 1464 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 DHX32Q7L7V1 743 aaKnown RBP15.98■□□□□ 0.15
PTPN9-206ENST00000618819 LONP1P36776 959 aaKnown RBP15.98■□□□□ 0.15
PTPN9-206ENST00000618819 CCDC197Q8NCU1 140 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 SMYD2Q9NRG4 433 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 FLOT1O75955 427 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 RANBP1P43487 201 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 U2AF1L4Q8WU68 220 aaKnown RBP15.98■□□□□ 0.15
PTPN9-206ENST00000618819 TSC22D3Q99576 134 aa15.98■□□□□ 0.15
PTPN9-206ENST00000618819 TXKP42681 527 aa15.97■□□□□ 0.15
PTPN9-206ENST00000618819 RAP1GDS1P52306 607 aa15.97■□□□□ 0.15
PTPN9-206ENST00000618819 SKOR1P84550 965 aa15.97■□□□□ 0.15
PTPN9-206ENST00000618819 GRAMD4Q6IC98 578 aa15.97■□□□□ 0.15
PTPN9-206ENST00000618819 XPO4Q9C0E2 1151 aaKnown RBP15.97■□□□□ 0.15
PTPN9-206ENST00000618819 CHPF2Q9P2E5 772 aa15.97■□□□□ 0.15
PTPN9-206ENST00000618819 NAIPQ13075 1403 aa15.97■□□□□ 0.15
PTPN9-206ENST00000618819 EFCAB13Q8IY85 973 aa15.97■□□□□ 0.15
PTPN9-206ENST00000618819 STAMQ92783 540 aa15.97■□□□□ 0.15
PTPN9-206ENST00000618819 CHMP6Q96FZ7 201 aa15.97■□□□□ 0.15
PTPN9-206ENST00000618819 NBPF3Q9H094 633 aa15.97■□□□□ 0.15
PTPN9-206ENST00000618819 ZNF202O95125 648 aa15.97■□□□□ 0.15
PTPN9-206ENST00000618819 TEKT1Q969V4 418 aa15.97■□□□□ 0.15
PTPN9-206ENST00000618819 INTS4Q96HW7 963 aaKnown RBP15.97■□□□□ 0.15
PTPN9-206ENST00000618819 EEF1GP26641 437 aaKnown RBP15.97■□□□□ 0.15
PTPN9-206ENST00000618819 TRAF1Q13077 416 aa15.97■□□□□ 0.15
PTPN9-206ENST00000618819 TRMT10CQ7L0Y3 403 aaKnown RBP15.97■□□□□ 0.15
PTPN9-206ENST00000618819 SUN1O94901 812 aa15.96■□□□□ 0.15
PTPN9-206ENST00000618819 BIRC2Q13490 618 aa15.96■□□□□ 0.15
PTPN9-206ENST00000618819 NSMCE1Q8WV22 266 aa15.96■□□□□ 0.15
PTPN9-206ENST00000618819 SUFUQ9UMX1 484 aa15.96■□□□□ 0.15
PTPN9-206ENST00000618819 JAG2Q9Y219 1238 aa15.96■□□□□ 0.15
PTPN9-206ENST00000618819 SPDYE16A6NNV3 312 aaPredicted RBP15.96■□□□□ 0.15
PTPN9-206ENST00000618819 MAP3K7O43318 606 aa15.96■□□□□ 0.15
PTPN9-206ENST00000618819 SPDYE2Q495Y8 402 aa15.96■□□□□ 0.15
PTPN9-206ENST00000618819 DDX39AO00148 427 aaKnown RBP15.96■□□□□ 0.15
PTPN9-206ENST00000618819 RNF113AO15541 343 aaKnown RBP15.96■□□□□ 0.15
PTPN9-206ENST00000618819 GNL1P36915 607 aaPredicted RBP15.96■□□□□ 0.15
PTPN9-206ENST00000618819 OTUD7BQ6GQQ9 843 aa15.96■□□□□ 0.15
PTPN9-206ENST00000618819 TRIM56Q9BRZ2 755 aaKnown RBP15.96■□□□□ 0.15
PTPN9-206ENST00000618819 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.15
PTPN9-206ENST00000618819 KRT19P08727 400 aa15.96■□□□□ 0.15
PTPN9-206ENST00000618819 CD19P15391 556 aa15.96■□□□□ 0.15
PTPN9-206ENST00000618819 CCDC152Q4G0S7 254 aa15.96■□□□□ 0.15
PTPN9-206ENST00000618819 NCOA5Q9HCD5 579 aaKnown RBP15.96■□□□□ 0.15
PTPN9-206ENST00000618819 POC1B-GALNT4F8VUJ3 575 aa15.96■□□□□ 0.14
PTPN9-206ENST00000618819 SMTNP53814 917 aa15.96■□□□□ 0.14
PTPN9-206ENST00000618819 FNBP4Q8N3X1 1017 aaPredicted RBP15.96■□□□□ 0.14
PTPN9-206ENST00000618819 JRKLQ9Y4A0 524 aa15.96■□□□□ 0.14
PTPN9-206ENST00000618819 ORC6Q9Y5N6 252 aa15.96■□□□□ 0.14
PTPN9-206ENST00000618819 RAD50Q92878 1312 aa15.96■□□□□ 0.14
PTPN9-206ENST00000618819 KCNH5Q8NCM2 988 aa15.96■□□□□ 0.14
PTPN9-206ENST00000618819 NAP1L4Q99733 375 aaKnown RBP15.96■□□□□ 0.14
PTPN9-206ENST00000618819 LSM14BQ9BX40 385 aaKnown RBP15.96■□□□□ 0.14
PTPN9-206ENST00000618819 DRC3Q9H069 523 aa15.96■□□□□ 0.14
PTPN9-206ENST00000618819 SBNO1A3KN83 1393 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 RIC8AQ9NPQ8 531 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 PDE6BP35913 854 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 PNOCQ13519 176 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 SLC12A1Q13621 1099 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 C16orf87Q6PH81 154 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 NACA2Q9H009 215 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 GPCPD1Q9NPB8 672 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 WWC3Q9ULE0 1092 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 PPP1R2P41236 205 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 NCAPH2Q6IBW4 605 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 BICC1Q9H694 974 aaKnown RBP15.95■□□□□ 0.14
PTPN9-206ENST00000618819 PCYT1AP49585 367 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 PMS1P54277 932 aaKnown RBP15.95■□□□□ 0.14
PTPN9-206ENST00000618819 STRN3Q13033 797 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 ZBTB41Q5SVQ8 909 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 PTPN22Q9Y2R2 807 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 KRT80Q6KB66 452 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 MAN1A2O60476 641 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 ASPHQ12797 758 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 POSTNQ15063 836 aa15.95■□□□□ 0.14
PTPN9-206ENST00000618819 PARP1P09874 1014 aaKnown RBP15.94■□□□□ 0.14
PTPN9-206ENST00000618819 ATXN8OSP0DMR3 200 aa15.94■□□□□ 0.14
PTPN9-206ENST00000618819 MCUQ8NE86 351 aa15.94■□□□□ 0.14
PTPN9-206ENST00000618819 KIF21BO75037 1637 aa15.94■□□□□ 0.14
PTPN9-206ENST00000618819 GCNT3O95395 438 aa15.94■□□□□ 0.14
PTPN9-206ENST00000618819 NAA35Q5VZE5 725 aa15.94■□□□□ 0.14
PTPN9-206ENST00000618819 INTS9Q9NV88 658 aaKnown RBP15.94■□□□□ 0.14
PTPN9-206ENST00000618819 ATF7P17544 494 aaPredicted RBP15.94■□□□□ 0.14
PTPN9-206ENST00000618819 KRT81Q14533 505 aa15.94■□□□□ 0.14
PTPN9-206ENST00000618819 ANKRD35Q8N283 1001 aa15.94■□□□□ 0.14
PTPN9-206ENST00000618819 USP26Q9BXU7 913 aa15.94■□□□□ 0.14
PTPN9-206ENST00000618819 YIPF3Q9GZM5 350 aa15.94■□□□□ 0.14
PTPN9-206ENST00000618819 GINS2Q9Y248 185 aa15.94■□□□□ 0.14
PTPN9-206ENST00000618819 HFM1A2PYH4 1435 aa15.94■□□□□ 0.14
PTPN9-206ENST00000618819 EFCAB8A8MWE9 144 aa15.94■□□□□ 0.14
PTPN9-206ENST00000618819 ZRANB2O95218 330 aaKnown RBP eCLIP15.94■□□□□ 0.14
PTPN9-206ENST00000618819 FCHSD1Q86WN1 690 aa15.94■□□□□ 0.14
PTPN9-206ENST00000618819 MLKLQ8NB16 471 aa15.94■□□□□ 0.14
PTPN9-206ENST00000618819 HNRNPCL2B2RXH8 293 aa15.94■□□□□ 0.14
PTPN9-206ENST00000618819 HNRNPCL1O60812 293 aaKnown RBP15.94■□□□□ 0.14
PTPN9-206ENST00000618819 C4orf50Q6ZRC1 276 aa15.94■□□□□ 0.14
PTPN9-206ENST00000618819 ANKRD13DQ6ZTN6 518 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms