RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 TNPO2O14787 897 aaKnown RBP18.24■□□□□ 0.51
ERCC1-213ENST00000592023 GPAA1O43292 621 aa18.24■□□□□ 0.51
ERCC1-213ENST00000592023 LRRFIP1Q32MZ4 808 aaKnown RBP18.24■□□□□ 0.51
ERCC1-213ENST00000592023 NBPF11Q86T75 865 aa18.24■□□□□ 0.51
ERCC1-213ENST00000592023 ARPP21Q9UBL0 812 aaPredicted RBP18.24■□□□□ 0.51
ERCC1-213ENST00000592023 HOXA7P31268 230 aaPredicted RBP18.23■□□□□ 0.51
ERCC1-213ENST00000592023 HERVK_113P62684 666 aa18.23■□□□□ 0.51
ERCC1-213ENST00000592023 CTR9Q6PD62 1173 aa18.23■□□□□ 0.51
ERCC1-213ENST00000592023 CLEC10AQ8IUN9 316 aa18.23■□□□□ 0.51
ERCC1-213ENST00000592023 C12orf42Q96LP6 360 aa18.23■□□□□ 0.51
ERCC1-213ENST00000592023 LNPKQ9C0E8 428 aa18.23■□□□□ 0.51
ERCC1-213ENST00000592023 KIAA1683Q9H0B3 1180 aa18.23■□□□□ 0.51
ERCC1-213ENST00000592023 GABRQQ9UN88 632 aa18.23■□□□□ 0.51
ERCC1-213ENST00000592023 GSG1L2A8MUP6 293 aa18.22■□□□□ 0.51
ERCC1-213ENST00000592023 AKR1B1P15121 316 aa18.22■□□□□ 0.51
ERCC1-213ENST00000592023 VCAM1P19320 739 aa18.22■□□□□ 0.51
ERCC1-213ENST00000592023 CDK8P49336 464 aa18.22■□□□□ 0.51
ERCC1-213ENST00000592023 USP14P54578 494 aa18.22■□□□□ 0.51
ERCC1-213ENST00000592023 B4GALNT3Q6L9W6 998 aa18.22■□□□□ 0.51
ERCC1-213ENST00000592023 TMEM179Q6ZVK1 233 aa18.22■□□□□ 0.51
ERCC1-213ENST00000592023 C16orf86Q6ZW13 317 aa18.22■□□□□ 0.51
ERCC1-213ENST00000592023 P2RX7Q99572 595 aaKnown RBP18.22■□□□□ 0.51
ERCC1-213ENST00000592023 RWDD1Q9H446 243 aaPredicted RBP18.22■□□□□ 0.51
ERCC1-213ENST00000592023 EPB41L4AQ9HCS5 686 aaPredicted RBP18.22■□□□□ 0.51
ERCC1-213ENST00000592023 TAOK2Q9UL54 1235 aa18.22■□□□□ 0.51
ERCC1-213ENST00000592023 PEX10O60683 326 aa18.21■□□□□ 0.51
ERCC1-213ENST00000592023 GRK4P32298 578 aa18.21■□□□□ 0.51
ERCC1-213ENST00000592023 TDO2P48775 406 aa18.21■□□□□ 0.51
ERCC1-213ENST00000592023 FLT3LGP49771 235 aa18.21■□□□□ 0.51
ERCC1-213ENST00000592023 PDE1AP54750 535 aa18.21■□□□□ 0.51
ERCC1-213ENST00000592023 SMC5Q8IY18 1101 aa18.21■□□□□ 0.51
ERCC1-213ENST00000592023 STK11IPQ8N1F8 1099 aa18.21■□□□□ 0.51
ERCC1-213ENST00000592023 SEC62Q99442 399 aaKnown RBP18.21■□□□□ 0.51
ERCC1-213ENST00000592023 MORF4L1Q9UBU8 362 aa18.21■□□□□ 0.51
ERCC1-213ENST00000592023 ROBO3Q96MS0 1386 aa18.2■□□□□ 0.5
ERCC1-213ENST00000592023 A0A1W2PRG0 241 aa18.2■□□□□ 0.5
ERCC1-213ENST00000592023 IGHDP01880 384 aa18.2■□□□□ 0.5
ERCC1-213ENST00000592023 GNAT2P19087 354 aa18.2■□□□□ 0.5
ERCC1-213ENST00000592023 ICA1Q05084 483 aa18.2■□□□□ 0.5
ERCC1-213ENST00000592023 COA7Q96BR5 231 aa18.2■□□□□ 0.5
ERCC1-213ENST00000592023 PAGR1Q9BTK6 254 aa18.2■□□□□ 0.5
ERCC1-213ENST00000592023 TMEM106CQ9BVX2 250 aa18.2■□□□□ 0.5
ERCC1-213ENST00000592023 TXNRD2Q9NNW7 524 aa18.2■□□□□ 0.5
ERCC1-213ENST00000592023 STAP2Q9UGK3 403 aa18.2■□□□□ 0.5
ERCC1-213ENST00000592023 MINDY4BA8MYZ0 360 aa18.19■□□□□ 0.5
ERCC1-213ENST00000592023 USP17L15C9J2P7 530 aa18.19■□□□□ 0.5
ERCC1-213ENST00000592023 USP17L13C9JLJ4 530 aa18.19■□□□□ 0.5
ERCC1-213ENST00000592023 USP17L11C9JVI0 530 aa18.19■□□□□ 0.5
ERCC1-213ENST00000592023 USP17L18D6R9N7 530 aa18.19■□□□□ 0.5
ERCC1-213ENST00000592023 USP17L22D6RA61 530 aa18.19■□□□□ 0.5
ERCC1-213ENST00000592023 USP17L17D6RBQ6 530 aa18.19■□□□□ 0.5
ERCC1-213ENST00000592023 USP17L19D6RCP7 530 aa18.19■□□□□ 0.5
ERCC1-213ENST00000592023 USP17L20D6RJB6 530 aa18.19■□□□□ 0.5
ERCC1-213ENST00000592023 APPP05067 770 aa18.19■□□□□ 0.5
ERCC1-213ENST00000592023 IRX6P78412 446 aaPredicted RBP18.19■□□□□ 0.5
ERCC1-213ENST00000592023 USP17L24Q0WX57 530 aa18.19■□□□□ 0.5
ERCC1-213ENST00000592023 ZMYM1Q5SVZ6 1142 aa18.19■□□□□ 0.5
ERCC1-213ENST00000592023 GIMAP6Q6P9H5 292 aa18.19■□□□□ 0.5
ERCC1-213ENST00000592023 CCDC17Q96LX7 622 aa18.19■□□□□ 0.5
ERCC1-213ENST00000592023 RPAP3Q9H6T3 665 aaPredicted RBP18.19■□□□□ 0.5
ERCC1-213ENST00000592023 GREB1LQ9C091 1923 aaPredicted RBP18.18■□□□□ 0.5
ERCC1-213ENST00000592023 MTFR1Q15390 333 aa18.18■□□□□ 0.5
ERCC1-213ENST00000592023 SBK1Q52WX2 424 aa18.18■□□□□ 0.5
ERCC1-213ENST00000592023 SLAIN1Q8ND83 568 aa18.18■□□□□ 0.5
ERCC1-213ENST00000592023 GTF3C2Q8WUA4 911 aaPredicted RBP18.18■□□□□ 0.5
ERCC1-213ENST00000592023 EVI5LQ96CN4 794 aa18.18■□□□□ 0.5
ERCC1-213ENST00000592023 ARHGEF10LQ9HCE6 1279 aa18.18■□□□□ 0.5
ERCC1-213ENST00000592023 BIN2Q9UBW5 565 aaPredicted RBP18.18■□□□□ 0.5
ERCC1-213ENST00000592023 ADCY3O60266 1144 aa18.17■□□□□ 0.5
ERCC1-213ENST00000592023 ELNP15502 786 aa18.17■□□□□ 0.5
ERCC1-213ENST00000592023 EN2P19622 333 aaPredicted RBP18.17■□□□□ 0.5
ERCC1-213ENST00000592023 ERVK-9P63128 1117 aa18.17■□□□□ 0.5
ERCC1-213ENST00000592023 ERVK-24P63145 666 aa18.17■□□□□ 0.5
ERCC1-213ENST00000592023 ATP2B2Q01814 1243 aa18.17■□□□□ 0.5
ERCC1-213ENST00000592023 CATSPERGQ6ZRH7 1159 aa18.17■□□□□ 0.5
ERCC1-213ENST00000592023 CCDC129Q6ZRS4 1044 aa18.17■□□□□ 0.5
ERCC1-213ENST00000592023 CHD1LQ86WJ1 897 aa18.17■□□□□ 0.5
ERCC1-213ENST00000592023 GPRC5AQ8NFJ5 357 aa18.17■□□□□ 0.5
ERCC1-213ENST00000592023 RBPJLQ9UBG7 517 aa18.17■□□□□ 0.5
ERCC1-213ENST00000592023 PLXNB2O15031 1838 aa18.16■□□□□ 0.5
ERCC1-213ENST00000592023 A0A0G2JMZ2 1700 aa18.16■□□□□ 0.5
ERCC1-213ENST00000592023 UBXN2AP68543 259 aa18.16■□□□□ 0.5
ERCC1-213ENST00000592023 POTEEQ6S8J3 1075 aa18.16■□□□□ 0.5
ERCC1-213ENST00000592023 IFNL3Q8IZI9 196 aa18.16■□□□□ 0.5
ERCC1-213ENST00000592023 NACAP1Q9BZK3 213 aa18.16■□□□□ 0.5
ERCC1-213ENST00000592023 TANGO6Q9C0B7 1094 aa18.16■□□□□ 0.5
ERCC1-213ENST00000592023 SH2D4AQ9H788 454 aa18.16■□□□□ 0.5
ERCC1-213ENST00000592023 DOCK3Q8IZD9 2030 aa18.16■□□□□ 0.5
ERCC1-213ENST00000592023 SPDYE16A6NNV3 312 aaPredicted RBP18.15■□□□□ 0.5
ERCC1-213ENST00000592023 PATL2C9JE40 543 aaKnown RBP18.15■□□□□ 0.5
ERCC1-213ENST00000592023 RASA1P20936 1047 aa18.15■□□□□ 0.5
ERCC1-213ENST00000592023 NUCB1Q02818 461 aa18.15■□□□□ 0.5
ERCC1-213ENST00000592023 IRF5Q13568 498 aa18.15■□□□□ 0.5
ERCC1-213ENST00000592023 KIAA1755Q5JYT7 1200 aa18.15■□□□□ 0.5
ERCC1-213ENST00000592023 SIAH1Q8IUQ4 282 aa18.15■□□□□ 0.5
ERCC1-213ENST00000592023 SPICE1Q8N0Z3 855 aa18.15■□□□□ 0.5
ERCC1-213ENST00000592023 NAPBQ9H115 298 aa18.15■□□□□ 0.5
ERCC1-213ENST00000592023 PORCNQ9H237 461 aa18.15■□□□□ 0.5
ERCC1-213ENST00000592023 MKNK2Q9HBH9 465 aa18.15■□□□□ 0.5
ERCC1-213ENST00000592023 TMX2Q9Y320 296 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms