RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 PPP4R3BQ5MIZ7 849 aa14.22□□□□□ -0.13
APOC1-206ENST00000590334 RGMBQ6NW40 437 aa14.22□□□□□ -0.13
APOC1-206ENST00000590334 SIAH1Q8IUQ4 282 aa14.22□□□□□ -0.13
APOC1-206ENST00000590334 CEP95Q96GE4 821 aa14.22□□□□□ -0.13
APOC1-206ENST00000590334 MTMR4Q9NYA4 1195 aa14.22□□□□□ -0.13
APOC1-206ENST00000590334 NYAP2Q9P242 653 aa14.22□□□□□ -0.13
APOC1-206ENST00000590334 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.22□□□□□ -0.13
APOC1-206ENST00000590334 ABT1Q9ULW3 272 aaKnown RBP14.22□□□□□ -0.13
APOC1-206ENST00000590334 AFG3L2Q9Y4W6 797 aa14.22□□□□□ -0.13
APOC1-206ENST00000590334 PARP14Q460N5 1801 aa14.22□□□□□ -0.13
APOC1-206ENST00000590334 ZBTB48P10074 688 aaPredicted RBP14.21□□□□□ -0.13
APOC1-206ENST00000590334 MCM5P33992 734 aa14.21□□□□□ -0.13
APOC1-206ENST00000590334 ANTXR2P58335 489 aa14.21□□□□□ -0.13
APOC1-206ENST00000590334 PPIL2Q13356 520 aa14.21□□□□□ -0.13
APOC1-206ENST00000590334 RAB3GAP1Q15042 981 aa14.21□□□□□ -0.13
APOC1-206ENST00000590334 CCDC178Q5BJE1 867 aa14.21□□□□□ -0.13
APOC1-206ENST00000590334 RCSD1Q6JBY9 416 aa14.21□□□□□ -0.13
APOC1-206ENST00000590334 DHX32Q7L7V1 743 aaKnown RBP14.21□□□□□ -0.13
APOC1-206ENST00000590334 IQCA1Q86XH1 822 aa14.21□□□□□ -0.13
APOC1-206ENST00000590334 ANKS1AQ92625 1134 aa14.21□□□□□ -0.13
APOC1-206ENST00000590334 MKL1Q969V6 931 aa14.21□□□□□ -0.13
APOC1-206ENST00000590334 OPTNQ96CV9 577 aa14.21□□□□□ -0.13
APOC1-206ENST00000590334 WNK4Q96J92 1243 aa14.21□□□□□ -0.13
APOC1-206ENST00000590334 JAKMIP1Q96N16 626 aaKnown RBP14.21□□□□□ -0.13
APOC1-206ENST00000590334 TTC14Q96N46 770 aa14.21□□□□□ -0.13
APOC1-206ENST00000590334 ZSCAN10Q96SZ4 725 aaPredicted RBP14.21□□□□□ -0.13
APOC1-206ENST00000590334 AS3MTQ9HBK9 375 aa14.21□□□□□ -0.13
APOC1-206ENST00000590334 ZSWIM6Q9HCJ5 1215 aa14.21□□□□□ -0.13
APOC1-206ENST00000590334 SYNPO2Q9UMS6 1093 aa14.21□□□□□ -0.13
APOC1-206ENST00000590334 ZHX2Q9Y6X8 837 aa14.21□□□□□ -0.13
APOC1-206ENST00000590334 NMT2O60551 498 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 TTLL1O95922 423 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 SLC10A3P09131 477 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 HSPA6P17066 643 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 GJA5P36382 358 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 ZNF157P51786 506 aaPredicted RBP14.2□□□□□ -0.14
APOC1-206ENST00000590334 ICA1Q05084 483 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 SEC23AQ15436 765 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 SPRYD7Q5W111 196 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 BLOC1S2Q6QNY1 142 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 RUFY3Q7L099 469 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 DGKHQ86XP1 1220 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 RASAL3Q86YV0 1011 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 FBXL16Q8N461 479 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 ZNF280CQ8ND82 737 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 IGDCC4Q8TDY8 1250 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 CCDC102AQ96A19 550 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 TMEM87BQ96K49 555 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 KIF2CQ99661 725 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 KCNH4Q9UQ05 1017 aa14.2□□□□□ -0.14
APOC1-206ENST00000590334 TNKSO95271 1327 aa14.19□□□□□ -0.14
APOC1-206ENST00000590334 A0A1W2PRG0 241 aa14.19□□□□□ -0.14
APOC1-206ENST00000590334 FAM155AB1AL88 458 aaPredicted RBP14.19□□□□□ -0.14
APOC1-206ENST00000590334 CXCL11O14625 94 aa14.19□□□□□ -0.14
APOC1-206ENST00000590334 PRC1O43663 620 aa14.19□□□□□ -0.14
APOC1-206ENST00000590334 EEF2P13639 858 aaKnown RBP14.19□□□□□ -0.14
APOC1-206ENST00000590334 CASTP20810 708 aaKnown RBP14.19□□□□□ -0.14
APOC1-206ENST00000590334 RPS6KB1P23443 525 aa14.19□□□□□ -0.14
APOC1-206ENST00000590334 DEFB115Q30KQ5 88 aa14.19□□□□□ -0.14
APOC1-206ENST00000590334 CCDC84Q86UT8 332 aaPredicted RBP14.19□□□□□ -0.14
APOC1-206ENST00000590334 CLEC10AQ8IUN9 316 aa14.19□□□□□ -0.14
APOC1-206ENST00000590334 ENAHQ8N8S7 591 aaPredicted RBP14.19□□□□□ -0.14
APOC1-206ENST00000590334 OTUD5Q96G74 571 aa14.19□□□□□ -0.14
APOC1-206ENST00000590334 ZKSCAN3Q9BRR0 538 aa14.19□□□□□ -0.14
APOC1-206ENST00000590334 UBAC1Q9BSL1 405 aa14.19□□□□□ -0.14
APOC1-206ENST00000590334 KIAA1683Q9H0B3 1180 aa14.19□□□□□ -0.14
APOC1-206ENST00000590334 ARHGEF10LQ9HCE6 1279 aa14.19□□□□□ -0.14
APOC1-206ENST00000590334 TMX2Q9Y320 296 aa14.19□□□□□ -0.14
APOC1-206ENST00000590334 C19orf81C9J6K1 198 aa14.18□□□□□ -0.14
APOC1-206ENST00000590334 USP17L10C9JJH3 530 aa14.18□□□□□ -0.14
APOC1-206ENST00000590334 IRF6O14896 467 aa14.18□□□□□ -0.14
APOC1-206ENST00000590334 ECE1P42892 770 aa14.18□□□□□ -0.14
APOC1-206ENST00000590334 BACE1P56817 501 aa14.18□□□□□ -0.14
APOC1-206ENST00000590334 SPP2Q13103 211 aa14.18□□□□□ -0.14
APOC1-206ENST00000590334 SART3Q15020 963 aaKnown RBP14.18□□□□□ -0.14
APOC1-206ENST00000590334 SH3D19Q5HYK7 790 aa14.18□□□□□ -0.14
APOC1-206ENST00000590334 CHST3Q7LGC8 479 aa14.18□□□□□ -0.14
APOC1-206ENST00000590334 IL27Q8NEV9 243 aa14.18□□□□□ -0.14
APOC1-206ENST00000590334 ACER1Q8TDN7 264 aa14.18□□□□□ -0.14
APOC1-206ENST00000590334 AGXT2Q9BYV1 514 aa14.18□□□□□ -0.14
APOC1-206ENST00000590334 ALDH8A1Q9H2A2 487 aaPredicted RBP14.18□□□□□ -0.14
APOC1-206ENST00000590334 SH2D4AQ9H788 454 aa14.18□□□□□ -0.14
APOC1-206ENST00000590334 CLIP2Q9UDT6 1046 aa14.18□□□□□ -0.14
APOC1-206ENST00000590334 CYP46A1Q9Y6A2 500 aa14.18□□□□□ -0.14
APOC1-206ENST00000590334 RLFQ13129 1914 aa14.17□□□□□ -0.14
APOC1-206ENST00000590334 A0A0G2JLL6 359 aaPredicted RBP14.17□□□□□ -0.14
APOC1-206ENST00000590334 SH2B2O14492 632 aaPredicted RBP14.17□□□□□ -0.14
APOC1-206ENST00000590334 IFIT3O14879 490 aaKnown RBP14.17□□□□□ -0.14
APOC1-206ENST00000590334 TOP1P11387 765 aaKnown RBP14.17□□□□□ -0.14
APOC1-206ENST00000590334 CPA1P15085 419 aa14.17□□□□□ -0.14
APOC1-206ENST00000590334 LIFRP42702 1097 aa14.17□□□□□ -0.14
APOC1-206ENST00000590334 PRRT2Q7Z6L0 340 aaPredicted RBP14.17□□□□□ -0.14
APOC1-206ENST00000590334 MS4A4AQ96JQ5 239 aa14.17□□□□□ -0.14
APOC1-206ENST00000590334 C12orf42Q96LP6 360 aa14.17□□□□□ -0.14
APOC1-206ENST00000590334 TMEM47Q9BQJ4 181 aa14.17□□□□□ -0.14
APOC1-206ENST00000590334 LY9Q9HBG7 655 aa14.17□□□□□ -0.14
APOC1-206ENST00000590334 STX8Q9UNK0 236 aa14.17□□□□□ -0.14
APOC1-206ENST00000590334 ERICH2A1L162 156 aa14.16□□□□□ -0.14
APOC1-206ENST00000590334 TESPA1A2RU30 521 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms